Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.82■■□□□ 1.08
GCM1Q9NP62 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
GCM1Q9NP62 AC135983.2-203ENST00000454486 1613 ntBASIC21.8■■□□□ 1.08
GCM1Q9NP62 AL139393.2-201ENST00000608721 2025 ntBASIC21.8■■□□□ 1.08
GCM1Q9NP62 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
GCM1Q9NP62 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.8■■□□□ 1.08
GCM1Q9NP62 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.8■■□□□ 1.08
GCM1Q9NP62 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
GCM1Q9NP62 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
GCM1Q9NP62 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
GCM1Q9NP62 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
GCM1Q9NP62 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
GCM1Q9NP62 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
GCM1Q9NP62 AP004833.2-201ENST00000532228 1454 ntBASIC21.77■■□□□ 1.07
GCM1Q9NP62 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
GCM1Q9NP62 WHAMMP2-203ENST00000563942 1603 ntBASIC21.77■■□□□ 1.07
GCM1Q9NP62 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
GCM1Q9NP62 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
GCM1Q9NP62 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
GCM1Q9NP62 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC21.75■■□□□ 1.07
GCM1Q9NP62 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
GCM1Q9NP62 DUX4L11-201ENST00000611504 1267 ntBASIC21.74■■□□□ 1.07
GCM1Q9NP62 DUX4L12-201ENST00000614593 1267 ntBASIC21.74■■□□□ 1.07
GCM1Q9NP62 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.74■■□□□ 1.07
GCM1Q9NP62 DUX4L14-201ENST00000621227 1267 ntBASIC21.74■■□□□ 1.07
GCM1Q9NP62 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
GCM1Q9NP62 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
GCM1Q9NP62 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GCM1Q9NP62 ABCB10P3-201ENST00000561950 2166 ntBASIC21.72■■□□□ 1.07
GCM1Q9NP62 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
GCM1Q9NP62 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.72■■□□□ 1.07
GCM1Q9NP62 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
GCM1Q9NP62 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.72■■□□□ 1.07
GCM1Q9NP62 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.72■■□□□ 1.07
GCM1Q9NP62 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
GCM1Q9NP62 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
GCM1Q9NP62 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
GCM1Q9NP62 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
GCM1Q9NP62 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
GCM1Q9NP62 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
GCM1Q9NP62 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
GCM1Q9NP62 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
GCM1Q9NP62 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC21.7■■□□□ 1.06
GCM1Q9NP62 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
GCM1Q9NP62 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
GCM1Q9NP62 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
GCM1Q9NP62 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.7■■□□□ 1.06
GCM1Q9NP62 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.7■■□□□ 1.06
GCM1Q9NP62 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
GCM1Q9NP62 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
GCM1Q9NP62 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.69■■□□□ 1.06
GCM1Q9NP62 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
GCM1Q9NP62 AC139426.1-201ENST00000568218 2529 ntBASIC21.68■■□□□ 1.06
GCM1Q9NP62 DUX4L13-201ENST00000554103 1267 ntBASIC21.68■■□□□ 1.06
GCM1Q9NP62 DUX4L15-201ENST00000611059 1267 ntBASIC21.68■■□□□ 1.06
GCM1Q9NP62 DUX4L23-201ENST00000615195 1269 ntBASIC21.68■■□□□ 1.06
GCM1Q9NP62 DUX4L24-201ENST00000617576 1269 ntBASIC21.68■■□□□ 1.06
GCM1Q9NP62 DUX4L22-201ENST00000618238 1269 ntBASIC21.68■■□□□ 1.06
GCM1Q9NP62 DUX4L20-201ENST00000619712 1269 ntBASIC21.68■■□□□ 1.06
GCM1Q9NP62 DUX4L21-201ENST00000622058 1269 ntBASIC21.68■■□□□ 1.06
GCM1Q9NP62 DUX4L10-201ENST00000622460 1267 ntBASIC21.68■■□□□ 1.06
GCM1Q9NP62 DUX4L25-201ENST00000624915 1269 ntBASIC21.68■■□□□ 1.06
GCM1Q9NP62 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
GCM1Q9NP62 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.68■■□□□ 1.06
GCM1Q9NP62 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
GCM1Q9NP62 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.68■■□□□ 1.06
GCM1Q9NP62 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
GCM1Q9NP62 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
GCM1Q9NP62 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
GCM1Q9NP62 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GCM1Q9NP62 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GCM1Q9NP62 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.67■■□□□ 1.06
GCM1Q9NP62 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.67■■□□□ 1.06
GCM1Q9NP62 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.67■■□□□ 1.06
GCM1Q9NP62 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GCM1Q9NP62 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.66■■□□□ 1.06
GCM1Q9NP62 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.66■■□□□ 1.06
GCM1Q9NP62 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GCM1Q9NP62 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.66■■□□□ 1.06
GCM1Q9NP62 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.66■■□□□ 1.06
GCM1Q9NP62 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.66■■□□□ 1.06
GCM1Q9NP62 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.65■■□□□ 1.06
GCM1Q9NP62 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GCM1Q9NP62 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.65■■□□□ 1.06
GCM1Q9NP62 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.65■■□□□ 1.06
GCM1Q9NP62 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GCM1Q9NP62 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
GCM1Q9NP62 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.64■■□□□ 1.06
GCM1Q9NP62 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
GCM1Q9NP62 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
GCM1Q9NP62 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
GCM1Q9NP62 MIR3648-2-201ENST00000581792 180 ntBASIC21.63■■□□□ 1.05
GCM1Q9NP62 MIR3648-1-201ENST00000615959 180 ntBASIC21.63■■□□□ 1.05
GCM1Q9NP62 AC100797.4-201ENST00000631653 1827 ntBASIC21.63■■□□□ 1.05
GCM1Q9NP62 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
GCM1Q9NP62 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
GCM1Q9NP62 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
GCM1Q9NP62 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
GCM1Q9NP62 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
GCM1Q9NP62 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms