Protein–RNA interactions for Protein: Q9H8H2

DDX31, Probable ATP-dependent RNA helicase DDX31, humanhuman

Known RBP Predictions only

Length 851 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX31Q9H8H2 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC24.39■■□□□ 1.5
DDX31Q9H8H2 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
DDX31Q9H8H2 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
DDX31Q9H8H2 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
DDX31Q9H8H2 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
DDX31Q9H8H2 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
DDX31Q9H8H2 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
DDX31Q9H8H2 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
DDX31Q9H8H2 CALM3-209ENST00000597743 577 ntTSL 4 BASIC24.38■■□□□ 1.49
DDX31Q9H8H2 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
DDX31Q9H8H2 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
DDX31Q9H8H2 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
DDX31Q9H8H2 WHAMMP2-203ENST00000563942 1603 ntBASIC24.37■■□□□ 1.49
DDX31Q9H8H2 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC24.37■■□□□ 1.49
DDX31Q9H8H2 AC100797.4-201ENST00000631653 1827 ntBASIC24.37■■□□□ 1.49
DDX31Q9H8H2 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
DDX31Q9H8H2 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
DDX31Q9H8H2 MEST-211ENST00000437945 1455 ntTSL 5 BASIC24.36■■□□□ 1.49
DDX31Q9H8H2 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC24.36■■□□□ 1.49
DDX31Q9H8H2 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
DDX31Q9H8H2 AC142086.6-201ENST00000621154 1765 ntBASIC24.36■■□□□ 1.49
DDX31Q9H8H2 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
DDX31Q9H8H2 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
DDX31Q9H8H2 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
DDX31Q9H8H2 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
DDX31Q9H8H2 AC021231.2-201ENST00000594613 730 ntBASIC24.35■■□□□ 1.49
DDX31Q9H8H2 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC24.34■■□□□ 1.49
DDX31Q9H8H2 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
DDX31Q9H8H2 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC24.34■■□□□ 1.49
DDX31Q9H8H2 DUX4L29-201ENST00000425409 679 ntBASIC24.34■■□□□ 1.49
DDX31Q9H8H2 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.34■■□□□ 1.49
DDX31Q9H8H2 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
DDX31Q9H8H2 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
DDX31Q9H8H2 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
DDX31Q9H8H2 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
DDX31Q9H8H2 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
DDX31Q9H8H2 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
DDX31Q9H8H2 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC24.33■■□□□ 1.48
DDX31Q9H8H2 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.33■■□□□ 1.48
DDX31Q9H8H2 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
DDX31Q9H8H2 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
DDX31Q9H8H2 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC24.32■■□□□ 1.48
DDX31Q9H8H2 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC24.32■■□□□ 1.48
DDX31Q9H8H2 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC24.32■■□□□ 1.48
DDX31Q9H8H2 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
DDX31Q9H8H2 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC24.31■■□□□ 1.48
DDX31Q9H8H2 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC24.31■■□□□ 1.48
DDX31Q9H8H2 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC24.31■■□□□ 1.48
DDX31Q9H8H2 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
DDX31Q9H8H2 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC24.31■■□□□ 1.48
DDX31Q9H8H2 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
DDX31Q9H8H2 PROC-203ENST00000409048 1586 ntTSL 5 BASIC24.3■■□□□ 1.48
DDX31Q9H8H2 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
DDX31Q9H8H2 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC24.3■■□□□ 1.48
DDX31Q9H8H2 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC24.28■■□□□ 1.48
DDX31Q9H8H2 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC24.28■■□□□ 1.48
DDX31Q9H8H2 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC24.28■■□□□ 1.48
DDX31Q9H8H2 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
DDX31Q9H8H2 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
DDX31Q9H8H2 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC24.27■■□□□ 1.48
DDX31Q9H8H2 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC24.27■■□□□ 1.48
DDX31Q9H8H2 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC24.27■■□□□ 1.48
DDX31Q9H8H2 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
DDX31Q9H8H2 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC24.26■■□□□ 1.47
DDX31Q9H8H2 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC24.26■■□□□ 1.47
DDX31Q9H8H2 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
DDX31Q9H8H2 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC24.25■■□□□ 1.47
DDX31Q9H8H2 HGH1-207ENST00000628266 258 ntTSL 5 BASIC24.25■■□□□ 1.47
DDX31Q9H8H2 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
DDX31Q9H8H2 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
DDX31Q9H8H2 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC24.23■■□□□ 1.47
DDX31Q9H8H2 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
DDX31Q9H8H2 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
DDX31Q9H8H2 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC24.22■■□□□ 1.47
DDX31Q9H8H2 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC24.22■■□□□ 1.47
DDX31Q9H8H2 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC24.21■■□□□ 1.47
DDX31Q9H8H2 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
DDX31Q9H8H2 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
DDX31Q9H8H2 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC24.21■■□□□ 1.47
DDX31Q9H8H2 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
DDX31Q9H8H2 AP002414.2-202ENST00000590929 1450 ntBASIC24.21■■□□□ 1.47
DDX31Q9H8H2 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC24.21■■□□□ 1.47
DDX31Q9H8H2 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
DDX31Q9H8H2 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
DDX31Q9H8H2 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
DDX31Q9H8H2 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC24.2■■□□□ 1.46
DDX31Q9H8H2 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
DDX31Q9H8H2 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
DDX31Q9H8H2 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
DDX31Q9H8H2 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
DDX31Q9H8H2 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC24.19■■□□□ 1.46
DDX31Q9H8H2 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
DDX31Q9H8H2 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
DDX31Q9H8H2 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC24.17■■□□□ 1.46
DDX31Q9H8H2 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
DDX31Q9H8H2 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
DDX31Q9H8H2 MLEC-202ENST00000412616 841 ntTSL 3 BASIC24.16■■□□□ 1.46
DDX31Q9H8H2 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
DDX31Q9H8H2 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC24.16■■□□□ 1.46
DDX31Q9H8H2 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms