Protein–RNA interactions for Protein: Q9H2X0

CHRD, Chordin, humanhuman

Predictions only

Length 955 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDQ9H2X0 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CHRDQ9H2X0 AL033527.3-201ENST00000566366 1196 ntBASIC26.24■■□□□ 1.79
CHRDQ9H2X0 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
CHRDQ9H2X0 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CHRDQ9H2X0 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
CHRDQ9H2X0 CHST11-203ENST00000547956 936 ntTSL 2 BASIC26.23■■□□□ 1.79
CHRDQ9H2X0 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CHRDQ9H2X0 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
CHRDQ9H2X0 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC26.22■■□□□ 1.79
CHRDQ9H2X0 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CHRDQ9H2X0 AC018358.1-201ENST00000631079 1402 ntBASIC26.22■■□□□ 1.79
CHRDQ9H2X0 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CHRDQ9H2X0 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
CHRDQ9H2X0 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC26.21■■□□□ 1.79
CHRDQ9H2X0 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC26.21■■□□□ 1.79
CHRDQ9H2X0 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC26.21■■□□□ 1.79
CHRDQ9H2X0 U85056.1-201ENST00000616429 682 ntBASIC26.21■■□□□ 1.79
CHRDQ9H2X0 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CHRDQ9H2X0 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CHRDQ9H2X0 HYI-213ENST00000583037 1322 ntTSL 5 BASIC26.19■■□□□ 1.78
CHRDQ9H2X0 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC26.19■■□□□ 1.78
CHRDQ9H2X0 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
CHRDQ9H2X0 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CHRDQ9H2X0 AC060814.1-201ENST00000554326 538 ntBASIC26.18■■□□□ 1.78
CHRDQ9H2X0 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CHRDQ9H2X0 AC135983.2-203ENST00000454486 1613 ntBASIC26.17■■□□□ 1.78
CHRDQ9H2X0 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
CHRDQ9H2X0 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC26.16■■□□□ 1.78
CHRDQ9H2X0 AC148477.6-201ENST00000623746 465 ntBASIC26.16■■□□□ 1.78
CHRDQ9H2X0 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
CHRDQ9H2X0 WHAMMP2-203ENST00000563942 1603 ntBASIC26.15■■□□□ 1.78
CHRDQ9H2X0 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC26.14■■□□□ 1.78
CHRDQ9H2X0 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.77
CHRDQ9H2X0 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
CHRDQ9H2X0 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CHRDQ9H2X0 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CHRDQ9H2X0 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC26.13■■□□□ 1.77
CHRDQ9H2X0 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC26.13■■□□□ 1.77
CHRDQ9H2X0 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC26.13■■□□□ 1.77
CHRDQ9H2X0 AC127502.1-201ENST00000399971 1502 ntBASIC26.13■■□□□ 1.77
CHRDQ9H2X0 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CHRDQ9H2X0 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
CHRDQ9H2X0 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
CHRDQ9H2X0 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC26.11■■□□□ 1.77
CHRDQ9H2X0 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC26.1■■□□□ 1.77
CHRDQ9H2X0 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26.1■■□□□ 1.77
CHRDQ9H2X0 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC26.1■■□□□ 1.77
CHRDQ9H2X0 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CHRDQ9H2X0 TSPY13P-201ENST00000338964 914 ntBASIC26.08■■□□□ 1.77
CHRDQ9H2X0 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CHRDQ9H2X0 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC26.08■■□□□ 1.77
CHRDQ9H2X0 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC26.08■■□□□ 1.77
CHRDQ9H2X0 GFER-205ENST00000569451 517 ntTSL 5 BASIC26.08■■□□□ 1.77
CHRDQ9H2X0 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC26.08■■□□□ 1.77
CHRDQ9H2X0 AC110285.7-201ENST00000624417 1536 ntBASIC26.08■■□□□ 1.77
CHRDQ9H2X0 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CHRDQ9H2X0 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CHRDQ9H2X0 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
CHRDQ9H2X0 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CHRDQ9H2X0 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CHRDQ9H2X0 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CHRDQ9H2X0 KRT18P60-201ENST00000312876 1297 ntBASIC26.05■■□□□ 1.76
CHRDQ9H2X0 AC092296.2-201ENST00000589470 999 ntBASIC26.05■■□□□ 1.76
CHRDQ9H2X0 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC26.05■■□□□ 1.76
CHRDQ9H2X0 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CHRDQ9H2X0 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC26.05■■□□□ 1.76
CHRDQ9H2X0 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
CHRDQ9H2X0 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
CHRDQ9H2X0 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC26.04■■□□□ 1.76
CHRDQ9H2X0 AC004987.1-201ENST00000428627 508 ntBASIC26.04■■□□□ 1.76
CHRDQ9H2X0 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
CHRDQ9H2X0 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
CHRDQ9H2X0 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
CHRDQ9H2X0 ATP5G2P3-201ENST00000429083 425 ntBASIC26.03■■□□□ 1.76
CHRDQ9H2X0 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CHRDQ9H2X0 RPS2-210ENST00000530225 765 ntTSL 2 BASIC26.03■■□□□ 1.76
CHRDQ9H2X0 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC26.03■■□□□ 1.76
CHRDQ9H2X0 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CHRDQ9H2X0 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
CHRDQ9H2X0 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CHRDQ9H2X0 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CHRDQ9H2X0 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CHRDQ9H2X0 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CHRDQ9H2X0 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC26.01■■□□□ 1.75
CHRDQ9H2X0 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC26.01■■□□□ 1.75
CHRDQ9H2X0 MIR219A2-201ENST00000608502 1504 ntBASIC26■■□□□ 1.75
CHRDQ9H2X0 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CHRDQ9H2X0 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC26■■□□□ 1.75
CHRDQ9H2X0 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
CHRDQ9H2X0 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CHRDQ9H2X0 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC25.99■■□□□ 1.75
CHRDQ9H2X0 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
CHRDQ9H2X0 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC25.98■■□□□ 1.75
CHRDQ9H2X0 ECEL1P2-201ENST00000461596 1295 ntBASIC25.98■■□□□ 1.75
CHRDQ9H2X0 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CHRDQ9H2X0 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC25.97■■□□□ 1.75
CHRDQ9H2X0 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CHRDQ9H2X0 GUK1-208ENST00000366728 842 ntTSL 2 BASIC25.97■■□□□ 1.75
CHRDQ9H2X0 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
CHRDQ9H2X0 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC25.97■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms