Protein–RNA interactions for Protein: Q96PU9

ODF3, Outer dense fiber protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3Q96PU9 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ODF3Q96PU9 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ODF3Q96PU9 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
ODF3Q96PU9 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
ODF3Q96PU9 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ODF3Q96PU9 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
ODF3Q96PU9 MEST-211ENST00000437945 1455 ntTSL 5 BASIC18.93■□□□□ 0.62
ODF3Q96PU9 AP006261.1-201ENST00000584783 668 ntBASIC18.93■□□□□ 0.62
ODF3Q96PU9 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ODF3Q96PU9 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ODF3Q96PU9 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ODF3Q96PU9 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ODF3Q96PU9 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ODF3Q96PU9 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ODF3Q96PU9 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ODF3Q96PU9 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC18.92■□□□□ 0.62
ODF3Q96PU9 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ODF3Q96PU9 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
ODF3Q96PU9 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ODF3Q96PU9 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ODF3Q96PU9 DUX4L28-201ENST00000623687 678 ntBASIC18.91■□□□□ 0.62
ODF3Q96PU9 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
ODF3Q96PU9 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ODF3Q96PU9 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC18.9■□□□□ 0.62
ODF3Q96PU9 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC18.9■□□□□ 0.62
ODF3Q96PU9 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC18.9■□□□□ 0.62
ODF3Q96PU9 AP002414.2-202ENST00000590929 1450 ntBASIC18.9■□□□□ 0.62
ODF3Q96PU9 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
ODF3Q96PU9 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ODF3Q96PU9 SHF-208ENST00000560734 1731 ntTSL 3 BASIC18.89■□□□□ 0.61
ODF3Q96PU9 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ODF3Q96PU9 AC100797.4-201ENST00000631653 1827 ntBASIC18.89■□□□□ 0.61
ODF3Q96PU9 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ODF3Q96PU9 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
ODF3Q96PU9 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
ODF3Q96PU9 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ODF3Q96PU9 AC135983.2-203ENST00000454486 1613 ntBASIC18.89■□□□□ 0.61
ODF3Q96PU9 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ODF3Q96PU9 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
ODF3Q96PU9 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ODF3Q96PU9 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ODF3Q96PU9 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ODF3Q96PU9 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC18.88■□□□□ 0.61
ODF3Q96PU9 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ODF3Q96PU9 LINC00273-201ENST00000539813 1452 ntBASIC18.87■□□□□ 0.61
ODF3Q96PU9 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ODF3Q96PU9 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
ODF3Q96PU9 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC18.86■□□□□ 0.61
ODF3Q96PU9 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ODF3Q96PU9 MIR6090-201ENST00000622481 60 ntBASIC18.86■□□□□ 0.61
ODF3Q96PU9 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ODF3Q96PU9 LINC01003-201ENST00000564834 1764 ntBASIC18.86■□□□□ 0.61
ODF3Q96PU9 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ODF3Q96PU9 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ODF3Q96PU9 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ODF3Q96PU9 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC18.85■□□□□ 0.61
ODF3Q96PU9 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
ODF3Q96PU9 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ODF3Q96PU9 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ODF3Q96PU9 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
ODF3Q96PU9 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC18.84■□□□□ 0.61
ODF3Q96PU9 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
ODF3Q96PU9 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC18.84■□□□□ 0.61
ODF3Q96PU9 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
ODF3Q96PU9 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
ODF3Q96PU9 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ODF3Q96PU9 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
ODF3Q96PU9 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC18.83■□□□□ 0.61
ODF3Q96PU9 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC18.83■□□□□ 0.6
ODF3Q96PU9 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
ODF3Q96PU9 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC18.82■□□□□ 0.6
ODF3Q96PU9 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ODF3Q96PU9 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ODF3Q96PU9 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ODF3Q96PU9 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC18.81■□□□□ 0.6
ODF3Q96PU9 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ODF3Q96PU9 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ODF3Q96PU9 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC18.81■□□□□ 0.6
ODF3Q96PU9 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ODF3Q96PU9 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
ODF3Q96PU9 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ODF3Q96PU9 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
ODF3Q96PU9 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
ODF3Q96PU9 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ODF3Q96PU9 WHAMMP2-203ENST00000563942 1603 ntBASIC18.8■□□□□ 0.6
ODF3Q96PU9 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC18.8■□□□□ 0.6
ODF3Q96PU9 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ODF3Q96PU9 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ODF3Q96PU9 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC18.79■□□□□ 0.6
ODF3Q96PU9 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ODF3Q96PU9 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
ODF3Q96PU9 AC018358.1-201ENST00000631079 1402 ntBASIC18.78■□□□□ 0.6
ODF3Q96PU9 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC18.78■□□□□ 0.6
ODF3Q96PU9 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ODF3Q96PU9 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC18.78■□□□□ 0.6
ODF3Q96PU9 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC18.77■□□□□ 0.6
ODF3Q96PU9 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC18.77■□□□□ 0.6
ODF3Q96PU9 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.6
ODF3Q96PU9 AL121749.1-202ENST00000609313 2153 ntBASIC18.76■□□□□ 0.59
ODF3Q96PU9 AC087741.3-201ENST00000624270 1347 ntBASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms