Protein–RNA interactions for Protein: Q96MV1

TMEM56, Transmembrane protein 56, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56Q96MV1 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM56Q96MV1 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC21.03■□□□□ 0.96
TMEM56Q96MV1 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
TMEM56Q96MV1 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
TMEM56Q96MV1 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
TMEM56Q96MV1 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TMEM56Q96MV1 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
TMEM56Q96MV1 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TMEM56Q96MV1 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
TMEM56Q96MV1 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TMEM56Q96MV1 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TMEM56Q96MV1 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TMEM56Q96MV1 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
TMEM56Q96MV1 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TMEM56Q96MV1 RARRES2P7-201ENST00000567349 469 ntBASIC21■□□□□ 0.95
TMEM56Q96MV1 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
TMEM56Q96MV1 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TMEM56Q96MV1 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TMEM56Q96MV1 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21■□□□□ 0.95
TMEM56Q96MV1 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
TMEM56Q96MV1 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.99■□□□□ 0.95
TMEM56Q96MV1 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMEM56Q96MV1 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMEM56Q96MV1 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMEM56Q96MV1 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMEM56Q96MV1 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TMEM56Q96MV1 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMEM56Q96MV1 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
TMEM56Q96MV1 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM56Q96MV1 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.97■□□□□ 0.95
TMEM56Q96MV1 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM56Q96MV1 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM56Q96MV1 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM56Q96MV1 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.97■□□□□ 0.95
TMEM56Q96MV1 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM56Q96MV1 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM56Q96MV1 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC20.96■□□□□ 0.95
TMEM56Q96MV1 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
TMEM56Q96MV1 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.96■□□□□ 0.95
TMEM56Q96MV1 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM56Q96MV1 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
TMEM56Q96MV1 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TMEM56Q96MV1 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
TMEM56Q96MV1 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
TMEM56Q96MV1 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TMEM56Q96MV1 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
TMEM56Q96MV1 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TMEM56Q96MV1 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TMEM56Q96MV1 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC20.94■□□□□ 0.94
TMEM56Q96MV1 SETD8P1-201ENST00000623146 1180 ntBASIC20.94■□□□□ 0.94
TMEM56Q96MV1 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
TMEM56Q96MV1 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TMEM56Q96MV1 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TMEM56Q96MV1 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TMEM56Q96MV1 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TMEM56Q96MV1 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TMEM56Q96MV1 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMEM56Q96MV1 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMEM56Q96MV1 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC20.92■□□□□ 0.94
TMEM56Q96MV1 AC135731.1-201ENST00000569415 2548 ntBASIC20.92■□□□□ 0.94
TMEM56Q96MV1 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TMEM56Q96MV1 AC127502.1-201ENST00000399971 1502 ntBASIC20.91■□□□□ 0.94
TMEM56Q96MV1 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.91■□□□□ 0.94
TMEM56Q96MV1 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TMEM56Q96MV1 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TMEM56Q96MV1 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TMEM56Q96MV1 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TMEM56Q96MV1 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TMEM56Q96MV1 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TMEM56Q96MV1 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM56Q96MV1 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM56Q96MV1 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.88■□□□□ 0.93
TMEM56Q96MV1 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.88■□□□□ 0.93
TMEM56Q96MV1 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC20.88■□□□□ 0.93
TMEM56Q96MV1 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.88■□□□□ 0.93
TMEM56Q96MV1 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
TMEM56Q96MV1 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
TMEM56Q96MV1 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.88■□□□□ 0.93
TMEM56Q96MV1 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.88■□□□□ 0.93
TMEM56Q96MV1 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TMEM56Q96MV1 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC20.87■□□□□ 0.93
TMEM56Q96MV1 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.87■□□□□ 0.93
TMEM56Q96MV1 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TMEM56Q96MV1 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TMEM56Q96MV1 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TMEM56Q96MV1 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TMEM56Q96MV1 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
TMEM56Q96MV1 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TMEM56Q96MV1 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TMEM56Q96MV1 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TMEM56Q96MV1 AL449106.1-201ENST00000608517 1980 ntBASIC20.85■□□□□ 0.93
TMEM56Q96MV1 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TMEM56Q96MV1 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TMEM56Q96MV1 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TMEM56Q96MV1 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TMEM56Q96MV1 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TMEM56Q96MV1 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TMEM56Q96MV1 AC100797.4-201ENST00000631653 1827 ntBASIC20.83■□□□□ 0.93
TMEM56Q96MV1 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.83■□□□□ 0.93
TMEM56Q96MV1 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms