Protein–RNA interactions for Protein: Q8WV22

NSMCE1, Non-structural maintenance of chromosomes element 1 homolog, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1Q8WV22 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC26.46■■□□□ 1.83
NSMCE1Q8WV22 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
NSMCE1Q8WV22 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.83
NSMCE1Q8WV22 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
NSMCE1Q8WV22 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
NSMCE1Q8WV22 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
NSMCE1Q8WV22 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
NSMCE1Q8WV22 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.42■■□□□ 1.82
NSMCE1Q8WV22 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
NSMCE1Q8WV22 AL139393.2-201ENST00000608721 2025 ntBASIC26.41■■□□□ 1.82
NSMCE1Q8WV22 DUX4L29-201ENST00000425409 679 ntBASIC26.41■■□□□ 1.82
NSMCE1Q8WV22 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
NSMCE1Q8WV22 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
NSMCE1Q8WV22 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
NSMCE1Q8WV22 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC26.4■■□□□ 1.82
NSMCE1Q8WV22 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
NSMCE1Q8WV22 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
NSMCE1Q8WV22 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
NSMCE1Q8WV22 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC26.37■■□□□ 1.81
NSMCE1Q8WV22 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
NSMCE1Q8WV22 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC26.37■■□□□ 1.81
NSMCE1Q8WV22 AP004833.2-201ENST00000532228 1454 ntBASIC26.36■■□□□ 1.81
NSMCE1Q8WV22 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
NSMCE1Q8WV22 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
NSMCE1Q8WV22 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
NSMCE1Q8WV22 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
NSMCE1Q8WV22 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
NSMCE1Q8WV22 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
NSMCE1Q8WV22 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
NSMCE1Q8WV22 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
NSMCE1Q8WV22 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC26.34■■□□□ 1.81
NSMCE1Q8WV22 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
NSMCE1Q8WV22 AC021231.2-201ENST00000594613 730 ntBASIC26.34■■□□□ 1.81
NSMCE1Q8WV22 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
NSMCE1Q8WV22 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
NSMCE1Q8WV22 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
NSMCE1Q8WV22 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
NSMCE1Q8WV22 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26.32■■□□□ 1.8
NSMCE1Q8WV22 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.32■■□□□ 1.8
NSMCE1Q8WV22 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.32■■□□□ 1.8
NSMCE1Q8WV22 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.32■■□□□ 1.8
NSMCE1Q8WV22 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
NSMCE1Q8WV22 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
NSMCE1Q8WV22 LINC00273-201ENST00000539813 1452 ntBASIC26.31■■□□□ 1.8
NSMCE1Q8WV22 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NSMCE1Q8WV22 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC26.31■■□□□ 1.8
NSMCE1Q8WV22 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NSMCE1Q8WV22 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC26.3■■□□□ 1.8
NSMCE1Q8WV22 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
NSMCE1Q8WV22 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
NSMCE1Q8WV22 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.3■■□□□ 1.8
NSMCE1Q8WV22 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
NSMCE1Q8WV22 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
NSMCE1Q8WV22 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC26.29■■□□□ 1.8
NSMCE1Q8WV22 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC26.29■■□□□ 1.8
NSMCE1Q8WV22 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
NSMCE1Q8WV22 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC26.28■■□□□ 1.8
NSMCE1Q8WV22 CALM3-209ENST00000597743 577 ntTSL 4 BASIC26.28■■□□□ 1.8
NSMCE1Q8WV22 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC26.27■■□□□ 1.8
NSMCE1Q8WV22 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC26.27■■□□□ 1.8
NSMCE1Q8WV22 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.27■■□□□ 1.8
NSMCE1Q8WV22 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
NSMCE1Q8WV22 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
NSMCE1Q8WV22 HGH1-207ENST00000628266 258 ntTSL 5 BASIC26.26■■□□□ 1.79
NSMCE1Q8WV22 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
NSMCE1Q8WV22 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
NSMCE1Q8WV22 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.25■■□□□ 1.79
NSMCE1Q8WV22 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC26.25■■□□□ 1.79
NSMCE1Q8WV22 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.25■■□□□ 1.79
NSMCE1Q8WV22 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
NSMCE1Q8WV22 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
NSMCE1Q8WV22 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
NSMCE1Q8WV22 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
NSMCE1Q8WV22 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
NSMCE1Q8WV22 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC26.24■■□□□ 1.79
NSMCE1Q8WV22 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
NSMCE1Q8WV22 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
NSMCE1Q8WV22 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26.23■■□□□ 1.79
NSMCE1Q8WV22 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
NSMCE1Q8WV22 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
NSMCE1Q8WV22 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
NSMCE1Q8WV22 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
NSMCE1Q8WV22 AC135983.2-203ENST00000454486 1613 ntBASIC26.23■■□□□ 1.79
NSMCE1Q8WV22 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.23■■□□□ 1.79
NSMCE1Q8WV22 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
NSMCE1Q8WV22 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
NSMCE1Q8WV22 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
NSMCE1Q8WV22 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
NSMCE1Q8WV22 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC26.21■■□□□ 1.79
NSMCE1Q8WV22 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
NSMCE1Q8WV22 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
NSMCE1Q8WV22 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC26.2■■□□□ 1.79
NSMCE1Q8WV22 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC26.2■■□□□ 1.78
NSMCE1Q8WV22 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
NSMCE1Q8WV22 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
NSMCE1Q8WV22 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
NSMCE1Q8WV22 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
NSMCE1Q8WV22 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26.19■■□□□ 1.78
NSMCE1Q8WV22 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
NSMCE1Q8WV22 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms