Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
RNF139Q8WU17 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
RNF139Q8WU17 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
RNF139Q8WU17 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.97■■□□□ 1.91
RNF139Q8WU17 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.97■■□□□ 1.91
RNF139Q8WU17 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.96■■□□□ 1.91
RNF139Q8WU17 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.96■■□□□ 1.91
RNF139Q8WU17 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.96■■□□□ 1.91
RNF139Q8WU17 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
RNF139Q8WU17 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC26.95■■□□□ 1.9
RNF139Q8WU17 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
RNF139Q8WU17 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
RNF139Q8WU17 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.94■■□□□ 1.9
RNF139Q8WU17 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
RNF139Q8WU17 AC135983.2-203ENST00000454486 1613 ntBASIC26.94■■□□□ 1.9
RNF139Q8WU17 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.94■■□□□ 1.9
RNF139Q8WU17 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.93■■□□□ 1.9
RNF139Q8WU17 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
RNF139Q8WU17 AL139393.2-201ENST00000608721 2025 ntBASIC26.93■■□□□ 1.9
RNF139Q8WU17 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
RNF139Q8WU17 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
RNF139Q8WU17 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
RNF139Q8WU17 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26.93■■□□□ 1.9
RNF139Q8WU17 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
RNF139Q8WU17 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.91■■□□□ 1.9
RNF139Q8WU17 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.91■■□□□ 1.9
RNF139Q8WU17 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.91■■□□□ 1.9
RNF139Q8WU17 WHAMMP2-203ENST00000563942 1603 ntBASIC26.9■■□□□ 1.9
RNF139Q8WU17 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.9■■□□□ 1.9
RNF139Q8WU17 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
RNF139Q8WU17 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC26.89■■□□□ 1.9
RNF139Q8WU17 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
RNF139Q8WU17 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.89■■□□□ 1.9
RNF139Q8WU17 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
RNF139Q8WU17 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
RNF139Q8WU17 MACF1-219ENST00000484793 834 ntTSL 2 BASIC26.88■■□□□ 1.89
RNF139Q8WU17 DUX4L13-201ENST00000554103 1267 ntBASIC26.88■■□□□ 1.89
RNF139Q8WU17 DUX4L15-201ENST00000611059 1267 ntBASIC26.88■■□□□ 1.89
RNF139Q8WU17 DUX4L23-201ENST00000615195 1269 ntBASIC26.88■■□□□ 1.89
RNF139Q8WU17 DUX4L24-201ENST00000617576 1269 ntBASIC26.88■■□□□ 1.89
RNF139Q8WU17 DUX4L22-201ENST00000618238 1269 ntBASIC26.88■■□□□ 1.89
RNF139Q8WU17 DUX4L20-201ENST00000619712 1269 ntBASIC26.88■■□□□ 1.89
RNF139Q8WU17 DUX4L21-201ENST00000622058 1269 ntBASIC26.88■■□□□ 1.89
RNF139Q8WU17 DUX4L10-201ENST00000622460 1267 ntBASIC26.88■■□□□ 1.89
RNF139Q8WU17 DUX4L25-201ENST00000624915 1269 ntBASIC26.88■■□□□ 1.89
RNF139Q8WU17 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.88■■□□□ 1.89
RNF139Q8WU17 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
RNF139Q8WU17 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26.86■■□□□ 1.89
RNF139Q8WU17 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.86■■□□□ 1.89
RNF139Q8WU17 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.86■■□□□ 1.89
RNF139Q8WU17 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RNF139Q8WU17 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
RNF139Q8WU17 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.86■■□□□ 1.89
RNF139Q8WU17 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
RNF139Q8WU17 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
RNF139Q8WU17 AP004833.2-201ENST00000532228 1454 ntBASIC26.85■■□□□ 1.89
RNF139Q8WU17 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
RNF139Q8WU17 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC26.84■■□□□ 1.89
RNF139Q8WU17 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC26.84■■□□□ 1.89
RNF139Q8WU17 MIR3648-2-201ENST00000581792 180 ntBASIC26.84■■□□□ 1.89
RNF139Q8WU17 MIR3648-1-201ENST00000615959 180 ntBASIC26.84■■□□□ 1.89
RNF139Q8WU17 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
RNF139Q8WU17 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.89
RNF139Q8WU17 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
RNF139Q8WU17 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
RNF139Q8WU17 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.83■■□□□ 1.89
RNF139Q8WU17 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
RNF139Q8WU17 HLA-V-202ENST00000446817 847 ntBASIC26.83■■□□□ 1.89
RNF139Q8WU17 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
RNF139Q8WU17 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
RNF139Q8WU17 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.83■■□□□ 1.88
RNF139Q8WU17 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC26.83■■□□□ 1.88
RNF139Q8WU17 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
RNF139Q8WU17 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC26.82■■□□□ 1.88
RNF139Q8WU17 CR559946.2-201ENST00000623684 991 ntBASIC26.82■■□□□ 1.88
RNF139Q8WU17 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
RNF139Q8WU17 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC26.82■■□□□ 1.88
RNF139Q8WU17 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
RNF139Q8WU17 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.81■■□□□ 1.88
RNF139Q8WU17 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
RNF139Q8WU17 AC016575.1-201ENST00000607026 382 ntBASIC26.81■■□□□ 1.88
RNF139Q8WU17 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
RNF139Q8WU17 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC26.8■■□□□ 1.88
RNF139Q8WU17 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
RNF139Q8WU17 MBP-237ENST00000579129 1052 ntTSL 5 BASIC26.8■■□□□ 1.88
RNF139Q8WU17 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
RNF139Q8WU17 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC26.79■■□□□ 1.88
RNF139Q8WU17 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC26.79■■□□□ 1.88
RNF139Q8WU17 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
RNF139Q8WU17 MEST-211ENST00000437945 1455 ntTSL 5 BASIC26.78■■□□□ 1.88
RNF139Q8WU17 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC26.78■■□□□ 1.88
RNF139Q8WU17 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC26.77■■□□□ 1.88
RNF139Q8WU17 HES6-205ENST00000409356 528 ntTSL 2 BASIC26.77■■□□□ 1.88
RNF139Q8WU17 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.77■■□□□ 1.88
RNF139Q8WU17 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
RNF139Q8WU17 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
RNF139Q8WU17 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
RNF139Q8WU17 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26.75■■□□□ 1.87
RNF139Q8WU17 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC26.75■■□□□ 1.87
RNF139Q8WU17 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms