Protein–RNA interactions for Protein: Q8NFP4

MDGA1, MAM domain-containing glycosylphosphatidylinositol anchor protein 1, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDGA1Q8NFP4 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
MDGA1Q8NFP4 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
MDGA1Q8NFP4 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
MDGA1Q8NFP4 SRP68-213ENST00000629930 165 ntTSL 5 BASIC26.39■■□□□ 1.82
MDGA1Q8NFP4 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
MDGA1Q8NFP4 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
MDGA1Q8NFP4 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC26.39■■□□□ 1.81
MDGA1Q8NFP4 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
MDGA1Q8NFP4 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC26.38■■□□□ 1.81
MDGA1Q8NFP4 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
MDGA1Q8NFP4 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC26.38■■□□□ 1.81
MDGA1Q8NFP4 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
MDGA1Q8NFP4 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26.37■■□□□ 1.81
MDGA1Q8NFP4 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
MDGA1Q8NFP4 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
MDGA1Q8NFP4 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
MDGA1Q8NFP4 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC26.36■■□□□ 1.81
MDGA1Q8NFP4 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
MDGA1Q8NFP4 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
MDGA1Q8NFP4 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
MDGA1Q8NFP4 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC26.35■■□□□ 1.81
MDGA1Q8NFP4 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
MDGA1Q8NFP4 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
MDGA1Q8NFP4 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC26.34■■□□□ 1.81
MDGA1Q8NFP4 LINC00273-201ENST00000539813 1452 ntBASIC26.34■■□□□ 1.81
MDGA1Q8NFP4 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC26.34■■□□□ 1.81
MDGA1Q8NFP4 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC26.33■■□□□ 1.81
MDGA1Q8NFP4 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC26.33■■□□□ 1.81
MDGA1Q8NFP4 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
MDGA1Q8NFP4 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
MDGA1Q8NFP4 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
MDGA1Q8NFP4 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC26.32■■□□□ 1.8
MDGA1Q8NFP4 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
MDGA1Q8NFP4 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC26.32■■□□□ 1.8
MDGA1Q8NFP4 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
MDGA1Q8NFP4 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
MDGA1Q8NFP4 RARRES2P2-201ENST00000394842 485 ntBASIC26.31■■□□□ 1.8
MDGA1Q8NFP4 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
MDGA1Q8NFP4 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
MDGA1Q8NFP4 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
MDGA1Q8NFP4 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
MDGA1Q8NFP4 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
MDGA1Q8NFP4 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC26.29■■□□□ 1.8
MDGA1Q8NFP4 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.29■■□□□ 1.8
MDGA1Q8NFP4 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
MDGA1Q8NFP4 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC26.28■■□□□ 1.8
MDGA1Q8NFP4 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC26.28■■□□□ 1.8
MDGA1Q8NFP4 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
MDGA1Q8NFP4 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
MDGA1Q8NFP4 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
MDGA1Q8NFP4 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
MDGA1Q8NFP4 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC26.27■■□□□ 1.8
MDGA1Q8NFP4 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
MDGA1Q8NFP4 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
MDGA1Q8NFP4 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
MDGA1Q8NFP4 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
MDGA1Q8NFP4 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
MDGA1Q8NFP4 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.26■■□□□ 1.79
MDGA1Q8NFP4 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
MDGA1Q8NFP4 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
MDGA1Q8NFP4 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
MDGA1Q8NFP4 GPX1-201ENST00000419349 1106 ntBASIC26.25■■□□□ 1.79
MDGA1Q8NFP4 TPT1-202ENST00000379055 948 ntTSL 2 BASIC26.24■■□□□ 1.79
MDGA1Q8NFP4 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
MDGA1Q8NFP4 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
MDGA1Q8NFP4 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
MDGA1Q8NFP4 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
MDGA1Q8NFP4 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
MDGA1Q8NFP4 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
MDGA1Q8NFP4 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
MDGA1Q8NFP4 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
MDGA1Q8NFP4 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
MDGA1Q8NFP4 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.22■■□□□ 1.79
MDGA1Q8NFP4 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
MDGA1Q8NFP4 ABCB10P3-201ENST00000561950 2166 ntBASIC26.22■■□□□ 1.79
MDGA1Q8NFP4 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
MDGA1Q8NFP4 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
MDGA1Q8NFP4 ABHD17AP5-201ENST00000580133 923 ntBASIC26.21■■□□□ 1.79
MDGA1Q8NFP4 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
MDGA1Q8NFP4 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
MDGA1Q8NFP4 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
MDGA1Q8NFP4 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
MDGA1Q8NFP4 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
MDGA1Q8NFP4 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
MDGA1Q8NFP4 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
MDGA1Q8NFP4 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
MDGA1Q8NFP4 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC26.19■■□□□ 1.78
MDGA1Q8NFP4 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
MDGA1Q8NFP4 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC26.19■■□□□ 1.78
MDGA1Q8NFP4 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC26.18■■□□□ 1.78
MDGA1Q8NFP4 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
MDGA1Q8NFP4 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
MDGA1Q8NFP4 AC139426.1-201ENST00000568218 2529 ntBASIC26.17■■□□□ 1.78
MDGA1Q8NFP4 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC26.17■■□□□ 1.78
MDGA1Q8NFP4 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
MDGA1Q8NFP4 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
MDGA1Q8NFP4 RNF126P1-201ENST00000567452 1320 ntBASIC26.16■■□□□ 1.78
MDGA1Q8NFP4 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
MDGA1Q8NFP4 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
MDGA1Q8NFP4 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms