Protein–RNA interactions for Protein: Q8N9Q2

SREK1IP1, Protein SREK1IP1, humanhuman

Predicted RBP Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1IP1Q8N9Q2 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.28■■□□□ 1
SREK1IP1Q8N9Q2 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SREK1IP1Q8N9Q2 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
SREK1IP1Q8N9Q2 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SREK1IP1Q8N9Q2 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SREK1IP1Q8N9Q2 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SREK1IP1Q8N9Q2 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SREK1IP1Q8N9Q2 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.27■■□□□ 1
SREK1IP1Q8N9Q2 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SREK1IP1Q8N9Q2 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.27■■□□□ 1
SREK1IP1Q8N9Q2 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SREK1IP1Q8N9Q2 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SREK1IP1Q8N9Q2 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SREK1IP1Q8N9Q2 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SREK1IP1Q8N9Q2 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
SREK1IP1Q8N9Q2 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SREK1IP1Q8N9Q2 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SREK1IP1Q8N9Q2 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SREK1IP1Q8N9Q2 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SREK1IP1Q8N9Q2 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SREK1IP1Q8N9Q2 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SREK1IP1Q8N9Q2 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
SREK1IP1Q8N9Q2 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
SREK1IP1Q8N9Q2 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.24■□□□□ 0.99
SREK1IP1Q8N9Q2 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SREK1IP1Q8N9Q2 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SREK1IP1Q8N9Q2 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SREK1IP1Q8N9Q2 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.24■□□□□ 0.99
SREK1IP1Q8N9Q2 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
SREK1IP1Q8N9Q2 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SREK1IP1Q8N9Q2 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
SREK1IP1Q8N9Q2 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SREK1IP1Q8N9Q2 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
SREK1IP1Q8N9Q2 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
SREK1IP1Q8N9Q2 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SREK1IP1Q8N9Q2 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
SREK1IP1Q8N9Q2 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.22■□□□□ 0.99
SREK1IP1Q8N9Q2 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC21.22■□□□□ 0.99
SREK1IP1Q8N9Q2 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SREK1IP1Q8N9Q2 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SREK1IP1Q8N9Q2 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SREK1IP1Q8N9Q2 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SREK1IP1Q8N9Q2 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.21■□□□□ 0.99
SREK1IP1Q8N9Q2 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.2■□□□□ 0.98
SREK1IP1Q8N9Q2 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SREK1IP1Q8N9Q2 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SREK1IP1Q8N9Q2 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.19■□□□□ 0.98
SREK1IP1Q8N9Q2 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SREK1IP1Q8N9Q2 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SREK1IP1Q8N9Q2 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.18■□□□□ 0.98
SREK1IP1Q8N9Q2 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SREK1IP1Q8N9Q2 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
SREK1IP1Q8N9Q2 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SREK1IP1Q8N9Q2 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SREK1IP1Q8N9Q2 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SREK1IP1Q8N9Q2 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SREK1IP1Q8N9Q2 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SREK1IP1Q8N9Q2 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SREK1IP1Q8N9Q2 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SREK1IP1Q8N9Q2 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.15■□□□□ 0.98
SREK1IP1Q8N9Q2 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SREK1IP1Q8N9Q2 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SREK1IP1Q8N9Q2 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SREK1IP1Q8N9Q2 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SREK1IP1Q8N9Q2 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SREK1IP1Q8N9Q2 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SREK1IP1Q8N9Q2 AC133561.1-201ENST00000568600 2415 ntBASIC21.14■□□□□ 0.97
SREK1IP1Q8N9Q2 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SREK1IP1Q8N9Q2 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SREK1IP1Q8N9Q2 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SREK1IP1Q8N9Q2 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SREK1IP1Q8N9Q2 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
SREK1IP1Q8N9Q2 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
SREK1IP1Q8N9Q2 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SREK1IP1Q8N9Q2 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SREK1IP1Q8N9Q2 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
SREK1IP1Q8N9Q2 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
SREK1IP1Q8N9Q2 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SREK1IP1Q8N9Q2 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SREK1IP1Q8N9Q2 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.12■□□□□ 0.97
SREK1IP1Q8N9Q2 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SREK1IP1Q8N9Q2 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
SREK1IP1Q8N9Q2 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SREK1IP1Q8N9Q2 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
SREK1IP1Q8N9Q2 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SREK1IP1Q8N9Q2 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
SREK1IP1Q8N9Q2 ST7-AS1-201ENST00000456775 1889 ntBASIC21.11■□□□□ 0.97
SREK1IP1Q8N9Q2 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SREK1IP1Q8N9Q2 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC21.11■□□□□ 0.97
SREK1IP1Q8N9Q2 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
SREK1IP1Q8N9Q2 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.11■□□□□ 0.97
SREK1IP1Q8N9Q2 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SREK1IP1Q8N9Q2 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC21.1■□□□□ 0.97
SREK1IP1Q8N9Q2 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SREK1IP1Q8N9Q2 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SREK1IP1Q8N9Q2 AC120057.4-201ENST00000624722 1615 ntBASIC21.09■□□□□ 0.97
SREK1IP1Q8N9Q2 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SREK1IP1Q8N9Q2 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SREK1IP1Q8N9Q2 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SREK1IP1Q8N9Q2 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms