Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COMMD1Q8N668 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COMMD1Q8N668 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC21■□□□□ 0.95
COMMD1Q8N668 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
COMMD1Q8N668 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21■□□□□ 0.95
COMMD1Q8N668 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COMMD1Q8N668 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21■□□□□ 0.95
COMMD1Q8N668 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC21■□□□□ 0.95
COMMD1Q8N668 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21■□□□□ 0.95
COMMD1Q8N668 AC044849.2-201ENST00000606596 710 ntBASIC21■□□□□ 0.95
COMMD1Q8N668 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
COMMD1Q8N668 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
COMMD1Q8N668 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COMMD1Q8N668 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
COMMD1Q8N668 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COMMD1Q8N668 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COMMD1Q8N668 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.99■□□□□ 0.95
COMMD1Q8N668 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC20.98■□□□□ 0.95
COMMD1Q8N668 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COMMD1Q8N668 AC087741.3-201ENST00000624270 1347 ntBASIC20.98■□□□□ 0.95
COMMD1Q8N668 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
COMMD1Q8N668 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COMMD1Q8N668 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COMMD1Q8N668 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC20.97■□□□□ 0.95
COMMD1Q8N668 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COMMD1Q8N668 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
COMMD1Q8N668 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.96■□□□□ 0.95
COMMD1Q8N668 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COMMD1Q8N668 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COMMD1Q8N668 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
COMMD1Q8N668 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
COMMD1Q8N668 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
COMMD1Q8N668 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COMMD1Q8N668 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COMMD1Q8N668 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COMMD1Q8N668 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COMMD1Q8N668 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.94■□□□□ 0.94
COMMD1Q8N668 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
COMMD1Q8N668 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COMMD1Q8N668 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COMMD1Q8N668 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COMMD1Q8N668 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COMMD1Q8N668 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COMMD1Q8N668 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
COMMD1Q8N668 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
COMMD1Q8N668 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.93■□□□□ 0.94
COMMD1Q8N668 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COMMD1Q8N668 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.92■□□□□ 0.94
COMMD1Q8N668 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC20.92■□□□□ 0.94
COMMD1Q8N668 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
COMMD1Q8N668 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COMMD1Q8N668 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COMMD1Q8N668 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
COMMD1Q8N668 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COMMD1Q8N668 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COMMD1Q8N668 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
COMMD1Q8N668 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
COMMD1Q8N668 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COMMD1Q8N668 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COMMD1Q8N668 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
COMMD1Q8N668 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.89■□□□□ 0.93
COMMD1Q8N668 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC20.89■□□□□ 0.93
COMMD1Q8N668 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COMMD1Q8N668 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COMMD1Q8N668 AL135925.1-201ENST00000605920 1701 ntBASIC20.88■□□□□ 0.93
COMMD1Q8N668 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COMMD1Q8N668 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
COMMD1Q8N668 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COMMD1Q8N668 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
COMMD1Q8N668 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COMMD1Q8N668 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COMMD1Q8N668 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.86■□□□□ 0.93
COMMD1Q8N668 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COMMD1Q8N668 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.85■□□□□ 0.93
COMMD1Q8N668 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
COMMD1Q8N668 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COMMD1Q8N668 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COMMD1Q8N668 AL139393.2-201ENST00000608721 2025 ntBASIC20.84■□□□□ 0.93
COMMD1Q8N668 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COMMD1Q8N668 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.84■□□□□ 0.93
COMMD1Q8N668 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COMMD1Q8N668 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.84■□□□□ 0.93
COMMD1Q8N668 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
COMMD1Q8N668 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
COMMD1Q8N668 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
COMMD1Q8N668 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
COMMD1Q8N668 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
COMMD1Q8N668 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.82■□□□□ 0.92
COMMD1Q8N668 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
COMMD1Q8N668 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.82■□□□□ 0.92
COMMD1Q8N668 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.82■□□□□ 0.92
COMMD1Q8N668 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COMMD1Q8N668 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
COMMD1Q8N668 AL449106.1-201ENST00000608517 1980 ntBASIC20.81■□□□□ 0.92
COMMD1Q8N668 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COMMD1Q8N668 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COMMD1Q8N668 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COMMD1Q8N668 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
COMMD1Q8N668 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.8■□□□□ 0.92
COMMD1Q8N668 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms