Protein–RNA interactions for Protein: Q8IUA7

ABCA9, ATP-binding cassette sub-family A member 9, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA9Q8IUA7 KRT18P60-201ENST00000312876 1297 ntBASIC40.28■■■■■ 4.04
ABCA9Q8IUA7 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC40.28■■■■■ 4.04
ABCA9Q8IUA7 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC40.27■■■■■ 4.04
ABCA9Q8IUA7 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC40.27■■■■■ 4.04
ABCA9Q8IUA7 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC40.27■■■■■ 4.04
ABCA9Q8IUA7 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC40.26■■■■■ 4.04
ABCA9Q8IUA7 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC40.26■■■■■ 4.04
ABCA9Q8IUA7 CHST11-203ENST00000547956 936 ntTSL 2 BASIC40.26■■■■■ 4.04
ABCA9Q8IUA7 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC40.24■■■■■ 4.03
ABCA9Q8IUA7 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC40.24■■■■■ 4.03
ABCA9Q8IUA7 AC092296.2-201ENST00000589470 999 ntBASIC40.24■■■■■ 4.03
ABCA9Q8IUA7 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC40.23■■■■■ 4.03
ABCA9Q8IUA7 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC40.22■■■■■ 4.03
ABCA9Q8IUA7 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC40.22■■■■■ 4.03
ABCA9Q8IUA7 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC40.21■■■■■ 4.03
ABCA9Q8IUA7 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC40.2■■■■■ 4.03
ABCA9Q8IUA7 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC40.2■■■■■ 4.03
ABCA9Q8IUA7 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC40.19■■■■■ 4.02
ABCA9Q8IUA7 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC40.19■■■■■ 4.02
ABCA9Q8IUA7 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC40.19■■■■■ 4.02
ABCA9Q8IUA7 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC40.19■■■■■ 4.02
ABCA9Q8IUA7 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC40.19■■■■■ 4.02
ABCA9Q8IUA7 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC40.18■■■■■ 4.02
ABCA9Q8IUA7 TSPY13P-201ENST00000338964 914 ntBASIC40.18■■■■■ 4.02
ABCA9Q8IUA7 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC40.17■■■■■ 4.02
ABCA9Q8IUA7 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC40.17■■■■■ 4.02
ABCA9Q8IUA7 AC135983.2-203ENST00000454486 1613 ntBASIC40.17■■■■■ 4.02
ABCA9Q8IUA7 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC40.17■■■■■ 4.02
ABCA9Q8IUA7 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC40.17■■■■■ 4.02
ABCA9Q8IUA7 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC40.16■■■■■ 4.02
ABCA9Q8IUA7 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC40.16■■■■■ 4.02
ABCA9Q8IUA7 WHAMMP2-203ENST00000563942 1603 ntBASIC40.16■■■■■ 4.02
ABCA9Q8IUA7 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC40.14■■■■■ 4.02
ABCA9Q8IUA7 RARRES2P1-201ENST00000474487 481 ntBASIC40.13■■■■■ 4.02
ABCA9Q8IUA7 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC40.13■■■■■ 4.01
ABCA9Q8IUA7 AL161658.1-201ENST00000623641 1967 ntBASIC40.13■■■■■ 4.01
ABCA9Q8IUA7 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC40.12■■■■■ 4.01
ABCA9Q8IUA7 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC40.12■■■■■ 4.01
ABCA9Q8IUA7 AC004987.1-201ENST00000428627 508 ntBASIC40.11■■■■■ 4.01
ABCA9Q8IUA7 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC40.11■■■■■ 4.01
ABCA9Q8IUA7 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC40.11■■■■■ 4.01
ABCA9Q8IUA7 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC40.1■■■■■ 4.01
ABCA9Q8IUA7 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC40.09■■■■■ 4.01
ABCA9Q8IUA7 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC40.09■■■■■ 4.01
ABCA9Q8IUA7 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC40.09■■■■■ 4.01
ABCA9Q8IUA7 ATP5G2P3-201ENST00000429083 425 ntBASIC40.05■■■■■ 4
ABCA9Q8IUA7 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC40.05■■■■■ 4
ABCA9Q8IUA7 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC40.05■■■■■ 4
ABCA9Q8IUA7 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC40.04■■■■■ 4
ABCA9Q8IUA7 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC40.04■■■■■ 4
ABCA9Q8IUA7 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC40.03■■■■■ 4
ABCA9Q8IUA7 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC40.03■■■■■ 4
ABCA9Q8IUA7 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC40.03■■■■■ 4
ABCA9Q8IUA7 GUK1-208ENST00000366728 842 ntTSL 2 BASIC40.02■■■■■ 4
ABCA9Q8IUA7 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC40.02■■■■■ 4
ABCA9Q8IUA7 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC40.02■■■■■ 4
ABCA9Q8IUA7 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC40.02■■■■■ 4
ABCA9Q8IUA7 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC40■■■■□ 3.99
ABCA9Q8IUA7 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC40■■■■□ 3.99
ABCA9Q8IUA7 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC40■■■■□ 3.99
ABCA9Q8IUA7 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC40■■■■□ 3.99
ABCA9Q8IUA7 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC40■■■■□ 3.99
ABCA9Q8IUA7 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC39.99■■■■□ 3.99
ABCA9Q8IUA7 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC39.99■■■■□ 3.99
ABCA9Q8IUA7 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC39.98■■■■□ 3.99
ABCA9Q8IUA7 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC39.98■■■■□ 3.99
ABCA9Q8IUA7 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC39.98■■■■□ 3.99
ABCA9Q8IUA7 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC39.97■■■■□ 3.99
ABCA9Q8IUA7 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC39.97■■■■□ 3.99
ABCA9Q8IUA7 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC39.96■■■■□ 3.99
ABCA9Q8IUA7 RPS2-210ENST00000530225 765 ntTSL 2 BASIC39.96■■■■□ 3.99
ABCA9Q8IUA7 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC39.94■■■■□ 3.99
ABCA9Q8IUA7 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC39.94■■■■□ 3.99
ABCA9Q8IUA7 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC39.94■■■■□ 3.98
ABCA9Q8IUA7 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC39.94■■■■□ 3.98
ABCA9Q8IUA7 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC39.94■■■■□ 3.98
ABCA9Q8IUA7 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC39.92■■■■□ 3.98
ABCA9Q8IUA7 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC39.92■■■■□ 3.98
ABCA9Q8IUA7 AC127502.1-201ENST00000399971 1502 ntBASIC39.92■■■■□ 3.98
ABCA9Q8IUA7 AL157400.5-201ENST00000507624 621 ntBASIC39.91■■■■□ 3.98
ABCA9Q8IUA7 MIR219A2-201ENST00000608502 1504 ntBASIC39.91■■■■□ 3.98
ABCA9Q8IUA7 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC39.91■■■■□ 3.98
ABCA9Q8IUA7 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC39.91■■■■□ 3.98
ABCA9Q8IUA7 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC39.91■■■■□ 3.98
ABCA9Q8IUA7 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC39.9■■■■□ 3.98
ABCA9Q8IUA7 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC39.9■■■■□ 3.98
ABCA9Q8IUA7 AC110285.7-201ENST00000624417 1536 ntBASIC39.9■■■■□ 3.98
ABCA9Q8IUA7 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC39.9■■■■□ 3.98
ABCA9Q8IUA7 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC39.89■■■■□ 3.98
ABCA9Q8IUA7 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC39.89■■■■□ 3.98
ABCA9Q8IUA7 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC39.88■■■■□ 3.97
ABCA9Q8IUA7 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC39.88■■■■□ 3.97
ABCA9Q8IUA7 PEX7-203ENST00000541292 945 ntTSL 5 BASIC39.87■■■■□ 3.97
ABCA9Q8IUA7 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC39.87■■■■□ 3.97
ABCA9Q8IUA7 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC39.87■■■■□ 3.97
ABCA9Q8IUA7 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC39.87■■■■□ 3.97
ABCA9Q8IUA7 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC39.84■■■■□ 3.97
ABCA9Q8IUA7 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC39.84■■■■□ 3.97
ABCA9Q8IUA7 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC39.83■■■■□ 3.97
ABCA9Q8IUA7 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC39.83■■■■□ 3.97
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms