Protein–RNA interactions for Protein: Q86XK3

SFR1, Swi5-dependent recombination DNA repair protein 1 homolog, humanhuman

Predictions only

Length 245 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFR1Q86XK3 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC28.46■■■□□ 2.15
SFR1Q86XK3 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC28.46■■■□□ 2.15
SFR1Q86XK3 HGH1-207ENST00000628266 258 ntTSL 5 BASIC28.46■■■□□ 2.15
SFR1Q86XK3 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC28.45■■■□□ 2.15
SFR1Q86XK3 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC28.45■■■□□ 2.15
SFR1Q86XK3 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC28.45■■■□□ 2.14
SFR1Q86XK3 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC28.45■■■□□ 2.14
SFR1Q86XK3 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC28.45■■■□□ 2.14
SFR1Q86XK3 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC28.45■■■□□ 2.14
SFR1Q86XK3 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC28.45■■■□□ 2.14
SFR1Q86XK3 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
SFR1Q86XK3 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
SFR1Q86XK3 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC28.43■■■□□ 2.14
SFR1Q86XK3 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC28.43■■■□□ 2.14
SFR1Q86XK3 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC28.43■■■□□ 2.14
SFR1Q86XK3 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
SFR1Q86XK3 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
SFR1Q86XK3 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
SFR1Q86XK3 AC100797.4-201ENST00000631653 1827 ntBASIC28.42■■■□□ 2.14
SFR1Q86XK3 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
SFR1Q86XK3 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC28.42■■■□□ 2.14
SFR1Q86XK3 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
SFR1Q86XK3 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC28.42■■■□□ 2.14
SFR1Q86XK3 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
SFR1Q86XK3 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC28.41■■■□□ 2.14
SFR1Q86XK3 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC28.41■■■□□ 2.14
SFR1Q86XK3 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
SFR1Q86XK3 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
SFR1Q86XK3 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC28.41■■■□□ 2.14
SFR1Q86XK3 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
SFR1Q86XK3 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC28.4■■■□□ 2.14
SFR1Q86XK3 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC28.4■■■□□ 2.14
SFR1Q86XK3 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
SFR1Q86XK3 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
SFR1Q86XK3 DRD5P2-201ENST00000421395 2012 ntBASIC28.4■■■□□ 2.14
SFR1Q86XK3 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
SFR1Q86XK3 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC28.39■■■□□ 2.14
SFR1Q86XK3 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
SFR1Q86XK3 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
SFR1Q86XK3 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC28.39■■■□□ 2.14
SFR1Q86XK3 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC28.38■■■□□ 2.13
SFR1Q86XK3 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
SFR1Q86XK3 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
SFR1Q86XK3 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC28.37■■■□□ 2.13
SFR1Q86XK3 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
SFR1Q86XK3 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC28.36■■■□□ 2.13
SFR1Q86XK3 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC28.36■■■□□ 2.13
SFR1Q86XK3 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC28.35■■■□□ 2.13
SFR1Q86XK3 MLEC-202ENST00000412616 841 ntTSL 3 BASIC28.35■■■□□ 2.13
SFR1Q86XK3 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC28.35■■■□□ 2.13
SFR1Q86XK3 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC28.34■■■□□ 2.13
SFR1Q86XK3 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
SFR1Q86XK3 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC28.34■■■□□ 2.13
SFR1Q86XK3 MEST-211ENST00000437945 1455 ntTSL 5 BASIC28.34■■■□□ 2.13
SFR1Q86XK3 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
SFR1Q86XK3 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC28.33■■■□□ 2.13
SFR1Q86XK3 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC28.33■■■□□ 2.13
SFR1Q86XK3 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC28.33■■■□□ 2.13
SFR1Q86XK3 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC28.33■■■□□ 2.13
SFR1Q86XK3 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC28.33■■■□□ 2.13
SFR1Q86XK3 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
SFR1Q86XK3 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
SFR1Q86XK3 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
SFR1Q86XK3 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
SFR1Q86XK3 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
SFR1Q86XK3 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
SFR1Q86XK3 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
SFR1Q86XK3 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC28.29■■■□□ 2.12
SFR1Q86XK3 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
SFR1Q86XK3 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC28.28■■■□□ 2.12
SFR1Q86XK3 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC28.27■■■□□ 2.12
SFR1Q86XK3 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
SFR1Q86XK3 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
SFR1Q86XK3 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC28.26■■■□□ 2.12
SFR1Q86XK3 ZNRF2P2-203ENST00000454624 420 ntBASIC28.26■■■□□ 2.11
SFR1Q86XK3 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC28.26■■■□□ 2.11
SFR1Q86XK3 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC28.25■■■□□ 2.11
SFR1Q86XK3 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC28.25■■■□□ 2.11
SFR1Q86XK3 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
SFR1Q86XK3 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
SFR1Q86XK3 ABHD17AP4-201ENST00000411545 909 ntBASIC28.24■■■□□ 2.11
SFR1Q86XK3 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
SFR1Q86XK3 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC28.23■■■□□ 2.11
SFR1Q86XK3 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
SFR1Q86XK3 AC142086.6-201ENST00000621154 1765 ntBASIC28.22■■■□□ 2.11
SFR1Q86XK3 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC28.22■■■□□ 2.11
SFR1Q86XK3 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC28.21■■■□□ 2.11
SFR1Q86XK3 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC28.21■■■□□ 2.11
SFR1Q86XK3 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC28.21■■■□□ 2.11
SFR1Q86XK3 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC28.21■■■□□ 2.11
SFR1Q86XK3 LINC01971-201ENST00000617888 1048 ntBASIC28.21■■■□□ 2.11
SFR1Q86XK3 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
SFR1Q86XK3 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
SFR1Q86XK3 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
SFR1Q86XK3 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC28.2■■■□□ 2.1
SFR1Q86XK3 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
SFR1Q86XK3 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
SFR1Q86XK3 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
SFR1Q86XK3 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
SFR1Q86XK3 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms