Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
USP50Q70EL3 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
USP50Q70EL3 ATP5G2P3-201ENST00000429083 425 ntBASIC31.18■■■□□ 2.58
USP50Q70EL3 RARRES2P1-201ENST00000474487 481 ntBASIC31.18■■■□□ 2.58
USP50Q70EL3 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
USP50Q70EL3 KRT18P60-201ENST00000312876 1297 ntBASIC31.17■■■□□ 2.58
USP50Q70EL3 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC31.17■■■□□ 2.58
USP50Q70EL3 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
USP50Q70EL3 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
USP50Q70EL3 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC31.15■■■□□ 2.58
USP50Q70EL3 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
USP50Q70EL3 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC31.14■■■□□ 2.58
USP50Q70EL3 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
USP50Q70EL3 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
USP50Q70EL3 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC31.13■■■□□ 2.57
USP50Q70EL3 GUK1-208ENST00000366728 842 ntTSL 2 BASIC31.13■■■□□ 2.57
USP50Q70EL3 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
USP50Q70EL3 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC31.13■■■□□ 2.57
USP50Q70EL3 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC31.13■■■□□ 2.57
USP50Q70EL3 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC31.12■■■□□ 2.57
USP50Q70EL3 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
USP50Q70EL3 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC31.11■■■□□ 2.57
USP50Q70EL3 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC31.11■■■□□ 2.57
USP50Q70EL3 AC148477.6-201ENST00000623746 465 ntBASIC31.11■■■□□ 2.57
USP50Q70EL3 AC010864.1-201ENST00000609407 1511 ntBASIC31.1■■■□□ 2.57
USP50Q70EL3 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
USP50Q70EL3 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC31.09■■■□□ 2.57
USP50Q70EL3 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC31.09■■■□□ 2.57
USP50Q70EL3 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC31.08■■■□□ 2.57
USP50Q70EL3 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
USP50Q70EL3 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
USP50Q70EL3 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
USP50Q70EL3 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC31.06■■■□□ 2.56
USP50Q70EL3 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC31.05■■■□□ 2.56
USP50Q70EL3 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
USP50Q70EL3 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC31.05■■■□□ 2.56
USP50Q70EL3 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
USP50Q70EL3 AC092296.2-201ENST00000589470 999 ntBASIC31.05■■■□□ 2.56
USP50Q70EL3 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
USP50Q70EL3 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC31.04■■■□□ 2.56
USP50Q70EL3 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC31.04■■■□□ 2.56
USP50Q70EL3 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC31.03■■■□□ 2.56
USP50Q70EL3 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC31.03■■■□□ 2.56
USP50Q70EL3 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
USP50Q70EL3 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
USP50Q70EL3 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC31.02■■■□□ 2.56
USP50Q70EL3 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
USP50Q70EL3 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC31.02■■■□□ 2.56
USP50Q70EL3 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC31.02■■■□□ 2.56
USP50Q70EL3 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC31.02■■■□□ 2.56
USP50Q70EL3 AL161658.1-201ENST00000623641 1967 ntBASIC31.01■■■□□ 2.56
USP50Q70EL3 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
USP50Q70EL3 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
USP50Q70EL3 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
USP50Q70EL3 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC31■■■□□ 2.55
USP50Q70EL3 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC31■■■□□ 2.55
USP50Q70EL3 AC135983.2-203ENST00000454486 1613 ntBASIC30.99■■■□□ 2.55
USP50Q70EL3 WHAMMP2-203ENST00000563942 1603 ntBASIC30.98■■■□□ 2.55
USP50Q70EL3 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC30.98■■■□□ 2.55
USP50Q70EL3 ECEL1P2-201ENST00000461596 1295 ntBASIC30.98■■■□□ 2.55
USP50Q70EL3 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
USP50Q70EL3 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC30.96■■■□□ 2.55
USP50Q70EL3 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
USP50Q70EL3 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC30.96■■■□□ 2.55
USP50Q70EL3 AC110285.7-201ENST00000624417 1536 ntBASIC30.96■■■□□ 2.55
USP50Q70EL3 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
USP50Q70EL3 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC30.95■■■□□ 2.54
USP50Q70EL3 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
USP50Q70EL3 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
USP50Q70EL3 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
USP50Q70EL3 HES4-204ENST00000484667 667 ntTSL 3 BASIC30.93■■■□□ 2.54
USP50Q70EL3 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
USP50Q70EL3 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC30.92■■■□□ 2.54
USP50Q70EL3 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
USP50Q70EL3 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
USP50Q70EL3 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
USP50Q70EL3 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
USP50Q70EL3 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC30.91■■■□□ 2.54
USP50Q70EL3 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC30.91■■■□□ 2.54
USP50Q70EL3 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC30.9■■■□□ 2.54
USP50Q70EL3 MIR219A2-201ENST00000608502 1504 ntBASIC30.9■■■□□ 2.54
USP50Q70EL3 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
USP50Q70EL3 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
USP50Q70EL3 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC30.9■■■□□ 2.54
USP50Q70EL3 RPS2-210ENST00000530225 765 ntTSL 2 BASIC30.9■■■□□ 2.54
USP50Q70EL3 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC30.9■■■□□ 2.54
USP50Q70EL3 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
USP50Q70EL3 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
USP50Q70EL3 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
USP50Q70EL3 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
USP50Q70EL3 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
USP50Q70EL3 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
USP50Q70EL3 AC127502.1-201ENST00000399971 1502 ntBASIC30.88■■■□□ 2.53
USP50Q70EL3 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
USP50Q70EL3 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC30.87■■■□□ 2.53
USP50Q70EL3 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC30.87■■■□□ 2.53
USP50Q70EL3 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
USP50Q70EL3 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC30.86■■■□□ 2.53
USP50Q70EL3 AL035685.1-201ENST00000636663 812 ntBASIC30.86■■■□□ 2.53
USP50Q70EL3 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC30.85■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms