Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
C11orf88Q6PI97 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.96■■□□□ 1.11
C11orf88Q6PI97 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
C11orf88Q6PI97 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
C11orf88Q6PI97 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
C11orf88Q6PI97 AL133380.1-201ENST00000506013 324 ntBASIC21.94■■□□□ 1.1
C11orf88Q6PI97 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
C11orf88Q6PI97 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
C11orf88Q6PI97 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
C11orf88Q6PI97 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
C11orf88Q6PI97 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
C11orf88Q6PI97 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
C11orf88Q6PI97 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
C11orf88Q6PI97 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC21.93■■□□□ 1.1
C11orf88Q6PI97 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.92■■□□□ 1.1
C11orf88Q6PI97 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
C11orf88Q6PI97 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
C11orf88Q6PI97 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC21.92■■□□□ 1.1
C11orf88Q6PI97 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
C11orf88Q6PI97 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
C11orf88Q6PI97 AP006261.1-201ENST00000584783 668 ntBASIC21.92■■□□□ 1.1
C11orf88Q6PI97 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.91■■□□□ 1.1
C11orf88Q6PI97 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
C11orf88Q6PI97 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC21.91■■□□□ 1.1
C11orf88Q6PI97 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
C11orf88Q6PI97 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
C11orf88Q6PI97 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
C11orf88Q6PI97 AL391121.1-201ENST00000607967 1349 ntBASIC21.9■■□□□ 1.1
C11orf88Q6PI97 AL139393.2-201ENST00000608721 2025 ntBASIC21.9■■□□□ 1.1
C11orf88Q6PI97 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
C11orf88Q6PI97 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
C11orf88Q6PI97 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
C11orf88Q6PI97 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
C11orf88Q6PI97 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.1
C11orf88Q6PI97 CAHM-201ENST00000604200 896 ntBASIC21.89■■□□□ 1.09
C11orf88Q6PI97 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
C11orf88Q6PI97 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
C11orf88Q6PI97 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
C11orf88Q6PI97 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.89■■□□□ 1.09
C11orf88Q6PI97 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
C11orf88Q6PI97 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
C11orf88Q6PI97 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
C11orf88Q6PI97 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
C11orf88Q6PI97 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
C11orf88Q6PI97 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
C11orf88Q6PI97 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
C11orf88Q6PI97 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
C11orf88Q6PI97 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
C11orf88Q6PI97 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
C11orf88Q6PI97 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
C11orf88Q6PI97 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC21.86■■□□□ 1.09
C11orf88Q6PI97 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
C11orf88Q6PI97 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
C11orf88Q6PI97 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
C11orf88Q6PI97 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
C11orf88Q6PI97 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
C11orf88Q6PI97 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
C11orf88Q6PI97 RPS2P35-201ENST00000443417 897 ntBASIC21.84■■□□□ 1.09
C11orf88Q6PI97 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
C11orf88Q6PI97 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
C11orf88Q6PI97 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
C11orf88Q6PI97 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
C11orf88Q6PI97 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
C11orf88Q6PI97 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
C11orf88Q6PI97 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
C11orf88Q6PI97 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
C11orf88Q6PI97 EBPL-202ENST00000378268 680 ntTSL 3 BASIC21.8■■□□□ 1.08
C11orf88Q6PI97 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.8■■□□□ 1.08
C11orf88Q6PI97 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
C11orf88Q6PI97 HNRNPLP2-201ENST00000568980 1570 ntBASIC21.79■■□□□ 1.08
C11orf88Q6PI97 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
C11orf88Q6PI97 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.79■■□□□ 1.08
C11orf88Q6PI97 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
C11orf88Q6PI97 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
C11orf88Q6PI97 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
C11orf88Q6PI97 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
C11orf88Q6PI97 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
C11orf88Q6PI97 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
C11orf88Q6PI97 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.76■■□□□ 1.07
C11orf88Q6PI97 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
C11orf88Q6PI97 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
C11orf88Q6PI97 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
C11orf88Q6PI97 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
C11orf88Q6PI97 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
C11orf88Q6PI97 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
C11orf88Q6PI97 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
C11orf88Q6PI97 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC21.74■■□□□ 1.07
C11orf88Q6PI97 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
C11orf88Q6PI97 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
C11orf88Q6PI97 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
C11orf88Q6PI97 MIR3665-201ENST00000578708 105 ntBASIC21.73■■□□□ 1.07
C11orf88Q6PI97 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
C11orf88Q6PI97 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
C11orf88Q6PI97 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
C11orf88Q6PI97 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
C11orf88Q6PI97 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.72■■□□□ 1.07
C11orf88Q6PI97 AL162393.1-201ENST00000437852 946 ntBASIC21.72■■□□□ 1.07
C11orf88Q6PI97 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
C11orf88Q6PI97 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
C11orf88Q6PI97 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms