Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
TRIM60Q495X7 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
TRIM60Q495X7 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC28.76■■■□□ 2.19
TRIM60Q495X7 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
TRIM60Q495X7 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
TRIM60Q495X7 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC28.74■■■□□ 2.19
TRIM60Q495X7 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC28.74■■■□□ 2.19
TRIM60Q495X7 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC28.74■■■□□ 2.19
TRIM60Q495X7 GFER-205ENST00000569451 517 ntTSL 5 BASIC28.74■■■□□ 2.19
TRIM60Q495X7 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC28.74■■■□□ 2.19
TRIM60Q495X7 CHST11-203ENST00000547956 936 ntTSL 2 BASIC28.73■■■□□ 2.19
TRIM60Q495X7 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC28.73■■■□□ 2.19
TRIM60Q495X7 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC28.72■■■□□ 2.19
TRIM60Q495X7 AC060814.1-201ENST00000554326 538 ntBASIC28.72■■■□□ 2.19
TRIM60Q495X7 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
TRIM60Q495X7 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
TRIM60Q495X7 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
TRIM60Q495X7 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC28.7■■■□□ 2.18
TRIM60Q495X7 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC28.7■■■□□ 2.18
TRIM60Q495X7 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC28.69■■■□□ 2.18
TRIM60Q495X7 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
TRIM60Q495X7 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
TRIM60Q495X7 TSPY13P-201ENST00000338964 914 ntBASIC28.68■■■□□ 2.18
TRIM60Q495X7 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC28.68■■■□□ 2.18
TRIM60Q495X7 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
TRIM60Q495X7 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC28.67■■■□□ 2.18
TRIM60Q495X7 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC28.67■■■□□ 2.18
TRIM60Q495X7 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
TRIM60Q495X7 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC28.67■■■□□ 2.18
TRIM60Q495X7 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC28.66■■■□□ 2.18
TRIM60Q495X7 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
TRIM60Q495X7 KRT18P60-201ENST00000312876 1297 ntBASIC28.66■■■□□ 2.18
TRIM60Q495X7 AC004987.1-201ENST00000428627 508 ntBASIC28.66■■■□□ 2.18
TRIM60Q495X7 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC28.66■■■□□ 2.18
TRIM60Q495X7 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
TRIM60Q495X7 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
TRIM60Q495X7 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
TRIM60Q495X7 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
TRIM60Q495X7 WHAMMP2-203ENST00000563942 1603 ntBASIC28.65■■■□□ 2.18
TRIM60Q495X7 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC28.64■■■□□ 2.18
TRIM60Q495X7 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC28.64■■■□□ 2.18
TRIM60Q495X7 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
TRIM60Q495X7 ATP5G2P3-201ENST00000429083 425 ntBASIC28.63■■■□□ 2.17
TRIM60Q495X7 RARRES2P1-201ENST00000474487 481 ntBASIC28.63■■■□□ 2.17
TRIM60Q495X7 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC28.63■■■□□ 2.17
TRIM60Q495X7 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
TRIM60Q495X7 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC28.62■■■□□ 2.17
TRIM60Q495X7 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC28.61■■■□□ 2.17
TRIM60Q495X7 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC28.61■■■□□ 2.17
TRIM60Q495X7 AC135983.2-203ENST00000454486 1613 ntBASIC28.61■■■□□ 2.17
TRIM60Q495X7 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC28.6■■■□□ 2.17
TRIM60Q495X7 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC28.6■■■□□ 2.17
TRIM60Q495X7 GUK1-208ENST00000366728 842 ntTSL 2 BASIC28.6■■■□□ 2.17
TRIM60Q495X7 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
TRIM60Q495X7 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC28.6■■■□□ 2.17
TRIM60Q495X7 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC28.6■■■□□ 2.17
TRIM60Q495X7 AC148477.6-201ENST00000623746 465 ntBASIC28.6■■■□□ 2.17
TRIM60Q495X7 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC28.59■■■□□ 2.17
TRIM60Q495X7 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
TRIM60Q495X7 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
TRIM60Q495X7 AC127502.1-201ENST00000399971 1502 ntBASIC28.59■■■□□ 2.17
TRIM60Q495X7 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC28.58■■■□□ 2.17
TRIM60Q495X7 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
TRIM60Q495X7 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC28.58■■■□□ 2.16
TRIM60Q495X7 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC28.57■■■□□ 2.16
TRIM60Q495X7 AC110285.7-201ENST00000624417 1536 ntBASIC28.57■■■□□ 2.16
TRIM60Q495X7 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC28.57■■■□□ 2.16
TRIM60Q495X7 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC28.56■■■□□ 2.16
TRIM60Q495X7 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC28.56■■■□□ 2.16
TRIM60Q495X7 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
TRIM60Q495X7 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC28.55■■■□□ 2.16
TRIM60Q495X7 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC28.55■■■□□ 2.16
TRIM60Q495X7 AC092296.2-201ENST00000589470 999 ntBASIC28.54■■■□□ 2.16
TRIM60Q495X7 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC28.54■■■□□ 2.16
TRIM60Q495X7 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC28.53■■■□□ 2.16
TRIM60Q495X7 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
TRIM60Q495X7 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
TRIM60Q495X7 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
TRIM60Q495X7 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
TRIM60Q495X7 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
TRIM60Q495X7 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC28.5■■■□□ 2.15
TRIM60Q495X7 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC28.49■■■□□ 2.15
TRIM60Q495X7 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
TRIM60Q495X7 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC28.49■■■□□ 2.15
TRIM60Q495X7 MIR219A2-201ENST00000608502 1504 ntBASIC28.48■■■□□ 2.15
TRIM60Q495X7 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC28.48■■■□□ 2.15
TRIM60Q495X7 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC28.48■■■□□ 2.15
TRIM60Q495X7 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
TRIM60Q495X7 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
TRIM60Q495X7 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
TRIM60Q495X7 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC28.48■■■□□ 2.15
TRIM60Q495X7 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC28.48■■■□□ 2.15
TRIM60Q495X7 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
TRIM60Q495X7 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC28.47■■■□□ 2.15
TRIM60Q495X7 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
TRIM60Q495X7 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
TRIM60Q495X7 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
TRIM60Q495X7 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
TRIM60Q495X7 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
TRIM60Q495X7 ECEL1P2-201ENST00000461596 1295 ntBASIC28.45■■■□□ 2.14
Retrieved 100 of 98,524 protein–RNA pairs in 9.9 ms