Protein–RNA interactions for Protein: P78345

RPP38, Ribonuclease P protein subunit p38, humanhuman

Known RBP Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP38P78345 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RPP38P78345 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
RPP38P78345 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
RPP38P78345 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC24.07■■□□□ 1.44
RPP38P78345 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
RPP38P78345 DUX4L29-201ENST00000425409 679 ntBASIC24.07■■□□□ 1.44
RPP38P78345 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC24.07■■□□□ 1.44
RPP38P78345 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
RPP38P78345 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC24.06■■□□□ 1.44
RPP38P78345 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC24.06■■□□□ 1.44
RPP38P78345 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC24.06■■□□□ 1.44
RPP38P78345 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RPP38P78345 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC24.06■■□□□ 1.44
RPP38P78345 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC24.05■■□□□ 1.44
RPP38P78345 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RPP38P78345 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
RPP38P78345 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RPP38P78345 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RPP38P78345 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RPP38P78345 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
RPP38P78345 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RPP38P78345 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RPP38P78345 AL121749.1-202ENST00000609313 2153 ntBASIC24.03■■□□□ 1.44
RPP38P78345 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
RPP38P78345 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
RPP38P78345 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RPP38P78345 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
RPP38P78345 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RPP38P78345 EI24-212ENST00000615917 1407 ntTSL 2 BASIC24.01■■□□□ 1.43
RPP38P78345 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC24.01■■□□□ 1.43
RPP38P78345 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RPP38P78345 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
RPP38P78345 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RPP38P78345 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC24■■□□□ 1.43
RPP38P78345 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RPP38P78345 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC23.99■■□□□ 1.43
RPP38P78345 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
RPP38P78345 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC23.99■■□□□ 1.43
RPP38P78345 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RPP38P78345 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RPP38P78345 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RPP38P78345 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC23.98■■□□□ 1.43
RPP38P78345 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC23.98■■□□□ 1.43
RPP38P78345 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RPP38P78345 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RPP38P78345 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RPP38P78345 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RPP38P78345 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RPP38P78345 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC23.97■■□□□ 1.43
RPP38P78345 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC23.97■■□□□ 1.43
RPP38P78345 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RPP38P78345 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
RPP38P78345 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
RPP38P78345 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC23.96■■□□□ 1.43
RPP38P78345 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RPP38P78345 ABHD17AP4-201ENST00000411545 909 ntBASIC23.96■■□□□ 1.43
RPP38P78345 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC23.96■■□□□ 1.43
RPP38P78345 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
RPP38P78345 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RPP38P78345 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RPP38P78345 AC021231.2-201ENST00000594613 730 ntBASIC23.95■■□□□ 1.42
RPP38P78345 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC23.95■■□□□ 1.42
RPP38P78345 HGH1-207ENST00000628266 258 ntTSL 5 BASIC23.95■■□□□ 1.42
RPP38P78345 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
RPP38P78345 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC23.94■■□□□ 1.42
RPP38P78345 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
RPP38P78345 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
RPP38P78345 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RPP38P78345 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.93■■□□□ 1.42
RPP38P78345 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
RPP38P78345 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
RPP38P78345 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
RPP38P78345 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
RPP38P78345 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RPP38P78345 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RPP38P78345 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
RPP38P78345 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RPP38P78345 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RPP38P78345 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RPP38P78345 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RPP38P78345 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RPP38P78345 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RPP38P78345 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
RPP38P78345 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
RPP38P78345 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
RPP38P78345 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
RPP38P78345 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
RPP38P78345 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RPP38P78345 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RPP38P78345 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RPP38P78345 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RPP38P78345 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
RPP38P78345 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC23.88■■□□□ 1.41
RPP38P78345 ZNRF2P2-203ENST00000454624 420 ntBASIC23.87■■□□□ 1.41
RPP38P78345 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RPP38P78345 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
RPP38P78345 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RPP38P78345 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RPP38P78345 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RPP38P78345 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms