Protein–RNA interactions for Protein: P62304

SNRPE, Small nuclear ribonucleoprotein E, humanhuman

Known RBP Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP62304 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
SNRPEP62304 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.04■□□□□ 0.8
SNRPEP62304 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SNRPEP62304 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.03■□□□□ 0.8
SNRPEP62304 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNRPEP62304 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.03■□□□□ 0.8
SNRPEP62304 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.02■□□□□ 0.8
SNRPEP62304 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SNRPEP62304 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SNRPEP62304 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.02■□□□□ 0.79
SNRPEP62304 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNRPEP62304 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNRPEP62304 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNRPEP62304 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
SNRPEP62304 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SNRPEP62304 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNRPEP62304 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.99■□□□□ 0.79
SNRPEP62304 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC19.99■□□□□ 0.79
SNRPEP62304 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.99■□□□□ 0.79
SNRPEP62304 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNRPEP62304 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
SNRPEP62304 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNRPEP62304 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
SNRPEP62304 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNRPEP62304 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
SNRPEP62304 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNRPEP62304 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SNRPEP62304 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNRPEP62304 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC19.98■□□□□ 0.79
SNRPEP62304 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNRPEP62304 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNRPEP62304 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNRPEP62304 CLDN5-201ENST00000403084 2357 ntBASIC19.97■□□□□ 0.79
SNRPEP62304 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SNRPEP62304 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNRPEP62304 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNRPEP62304 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SNRPEP62304 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SNRPEP62304 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SNRPEP62304 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.96■□□□□ 0.79
SNRPEP62304 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNRPEP62304 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNRPEP62304 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SNRPEP62304 LINC00543-201ENST00000567234 1845 ntBASIC19.95■□□□□ 0.78
SNRPEP62304 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.94■□□□□ 0.78
SNRPEP62304 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNRPEP62304 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SNRPEP62304 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNRPEP62304 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.93■□□□□ 0.78
SNRPEP62304 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
SNRPEP62304 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC19.93■□□□□ 0.78
SNRPEP62304 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNRPEP62304 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNRPEP62304 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNRPEP62304 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNRPEP62304 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC19.91■□□□□ 0.78
SNRPEP62304 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.91■□□□□ 0.78
SNRPEP62304 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNRPEP62304 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNRPEP62304 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNRPEP62304 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.9■□□□□ 0.78
SNRPEP62304 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SNRPEP62304 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SNRPEP62304 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNRPEP62304 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNRPEP62304 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNRPEP62304 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SNRPEP62304 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
SNRPEP62304 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNRPEP62304 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
SNRPEP62304 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC19.87■□□□□ 0.77
SNRPEP62304 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SNRPEP62304 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNRPEP62304 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNRPEP62304 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNRPEP62304 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SNRPEP62304 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNRPEP62304 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SNRPEP62304 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SNRPEP62304 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNRPEP62304 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNRPEP62304 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
SNRPEP62304 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNRPEP62304 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SNRPEP62304 AC012676.1-201ENST00000574705 1949 ntBASIC19.84■□□□□ 0.77
SNRPEP62304 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNRPEP62304 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNRPEP62304 AC091060.1-201ENST00000623524 1766 ntBASIC19.83■□□□□ 0.77
SNRPEP62304 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SNRPEP62304 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SNRPEP62304 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SNRPEP62304 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNRPEP62304 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNRPEP62304 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNRPEP62304 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SNRPEP62304 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SNRPEP62304 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.81■□□□□ 0.76
SNRPEP62304 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
SNRPEP62304 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNRPEP62304 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 8.5 ms