Protein–RNA interactions for Protein: P60673

PFN3, Profilin-3, humanhuman

Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFN3P60673 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PFN3P60673 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC25.64■■□□□ 1.7
PFN3P60673 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
PFN3P60673 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
PFN3P60673 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
PFN3P60673 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
PFN3P60673 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC25.63■■□□□ 1.69
PFN3P60673 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
PFN3P60673 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
PFN3P60673 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC25.63■■□□□ 1.69
PFN3P60673 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
PFN3P60673 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
PFN3P60673 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
PFN3P60673 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PFN3P60673 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC25.61■■□□□ 1.69
PFN3P60673 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
PFN3P60673 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PFN3P60673 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PFN3P60673 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
PFN3P60673 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PFN3P60673 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PFN3P60673 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC25.6■■□□□ 1.69
PFN3P60673 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC25.6■■□□□ 1.69
PFN3P60673 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
PFN3P60673 AC135983.2-203ENST00000454486 1613 ntBASIC25.59■■□□□ 1.69
PFN3P60673 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC25.59■■□□□ 1.69
PFN3P60673 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PFN3P60673 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PFN3P60673 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
PFN3P60673 CHST11-202ENST00000546689 756 ntTSL 2 BASIC25.58■■□□□ 1.69
PFN3P60673 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
PFN3P60673 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
PFN3P60673 ABCB10P3-201ENST00000561950 2166 ntBASIC25.57■■□□□ 1.68
PFN3P60673 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC25.57■■□□□ 1.68
PFN3P60673 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
PFN3P60673 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
PFN3P60673 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
PFN3P60673 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
PFN3P60673 WHAMMP2-203ENST00000563942 1603 ntBASIC25.55■■□□□ 1.68
PFN3P60673 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
PFN3P60673 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC25.54■■□□□ 1.68
PFN3P60673 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC25.54■■□□□ 1.68
PFN3P60673 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC25.53■■□□□ 1.68
PFN3P60673 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PFN3P60673 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
PFN3P60673 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC25.52■■□□□ 1.68
PFN3P60673 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PFN3P60673 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PFN3P60673 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
PFN3P60673 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC25.51■■□□□ 1.67
PFN3P60673 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PFN3P60673 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC25.5■■□□□ 1.67
PFN3P60673 HSD17B1P1-201ENST00000590052 955 ntBASIC25.5■■□□□ 1.67
PFN3P60673 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PFN3P60673 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC25.49■■□□□ 1.67
PFN3P60673 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC25.49■■□□□ 1.67
PFN3P60673 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
PFN3P60673 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PFN3P60673 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PFN3P60673 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PFN3P60673 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PFN3P60673 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
PFN3P60673 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC25.47■■□□□ 1.67
PFN3P60673 ABHD17AP3-201ENST00000503096 1137 ntBASIC25.47■■□□□ 1.67
PFN3P60673 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
PFN3P60673 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.47■■□□□ 1.67
PFN3P60673 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
PFN3P60673 AC139426.1-201ENST00000568218 2529 ntBASIC25.46■■□□□ 1.67
PFN3P60673 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PFN3P60673 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
PFN3P60673 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC25.46■■□□□ 1.67
PFN3P60673 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
PFN3P60673 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
PFN3P60673 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
PFN3P60673 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC25.45■■□□□ 1.66
PFN3P60673 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
PFN3P60673 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
PFN3P60673 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
PFN3P60673 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
PFN3P60673 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
PFN3P60673 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
PFN3P60673 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PFN3P60673 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC25.44■■□□□ 1.66
PFN3P60673 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
PFN3P60673 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PFN3P60673 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
PFN3P60673 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PFN3P60673 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PFN3P60673 SRP68-213ENST00000629930 165 ntTSL 5 BASIC25.43■■□□□ 1.66
PFN3P60673 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PFN3P60673 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
PFN3P60673 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
PFN3P60673 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
PFN3P60673 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
PFN3P60673 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
PFN3P60673 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC25.41■■□□□ 1.66
PFN3P60673 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
PFN3P60673 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
PFN3P60673 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
PFN3P60673 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC25.4■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms