Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC27.38■■□□□ 1.97
CLCN4P51793 AC008813.1-201ENST00000536597 885 ntBASIC27.38■■□□□ 1.97
CLCN4P51793 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CLCN4P51793 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC27.37■■□□□ 1.97
CLCN4P51793 AC135983.2-203ENST00000454486 1613 ntBASIC27.37■■□□□ 1.97
CLCN4P51793 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
CLCN4P51793 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
CLCN4P51793 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
CLCN4P51793 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC27.36■■□□□ 1.97
CLCN4P51793 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC27.36■■□□□ 1.97
CLCN4P51793 WHAMMP2-203ENST00000563942 1603 ntBASIC27.36■■□□□ 1.97
CLCN4P51793 AC022413.1-201ENST00000624602 984 ntBASIC27.35■■□□□ 1.97
CLCN4P51793 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC27.34■■□□□ 1.97
CLCN4P51793 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
CLCN4P51793 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CLCN4P51793 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC27.32■■□□□ 1.96
CLCN4P51793 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CLCN4P51793 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CLCN4P51793 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CLCN4P51793 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC27.31■■□□□ 1.96
CLCN4P51793 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC27.31■■□□□ 1.96
CLCN4P51793 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CLCN4P51793 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CLCN4P51793 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC27.3■■□□□ 1.96
CLCN4P51793 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
CLCN4P51793 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
CLCN4P51793 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CLCN4P51793 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CLCN4P51793 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CLCN4P51793 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC27.28■■□□□ 1.96
CLCN4P51793 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC27.28■■□□□ 1.96
CLCN4P51793 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CLCN4P51793 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC27.27■■□□□ 1.96
CLCN4P51793 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CLCN4P51793 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
CLCN4P51793 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
CLCN4P51793 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC27.27■■□□□ 1.96
CLCN4P51793 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CLCN4P51793 HES4-202ENST00000428771 1040 ntTSL 2 BASIC27.25■■□□□ 1.95
CLCN4P51793 CHST11-203ENST00000547956 936 ntTSL 2 BASIC27.25■■□□□ 1.95
CLCN4P51793 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CLCN4P51793 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC27.24■■□□□ 1.95
CLCN4P51793 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CLCN4P51793 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CLCN4P51793 AL135925.1-201ENST00000605920 1701 ntBASIC27.23■■□□□ 1.95
CLCN4P51793 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
CLCN4P51793 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC27.23■■□□□ 1.95
CLCN4P51793 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CLCN4P51793 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
CLCN4P51793 NTF6A-201ENST00000591175 560 ntBASIC27.22■■□□□ 1.95
CLCN4P51793 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
CLCN4P51793 AC110285.7-201ENST00000624417 1536 ntBASIC27.21■■□□□ 1.95
CLCN4P51793 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC27.21■■□□□ 1.95
CLCN4P51793 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC27.21■■□□□ 1.95
CLCN4P51793 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC27.2■■□□□ 1.94
CLCN4P51793 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC27.2■■□□□ 1.94
CLCN4P51793 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC27.19■■□□□ 1.94
CLCN4P51793 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
CLCN4P51793 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
CLCN4P51793 ST7-205ENST00000393446 2114 ntTSL 5 BASIC27.19■■□□□ 1.94
CLCN4P51793 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC27.19■■□□□ 1.94
CLCN4P51793 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CLCN4P51793 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC27.18■■□□□ 1.94
CLCN4P51793 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
CLCN4P51793 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
CLCN4P51793 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC27.18■■□□□ 1.94
CLCN4P51793 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
CLCN4P51793 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC27.17■■□□□ 1.94
CLCN4P51793 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CLCN4P51793 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC27.17■■□□□ 1.94
CLCN4P51793 AC148477.6-201ENST00000623746 465 ntBASIC27.17■■□□□ 1.94
CLCN4P51793 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
CLCN4P51793 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC27.16■■□□□ 1.94
CLCN4P51793 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
CLCN4P51793 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CLCN4P51793 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC27.15■■□□□ 1.94
CLCN4P51793 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
CLCN4P51793 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC27.14■■□□□ 1.94
CLCN4P51793 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC27.14■■□□□ 1.94
CLCN4P51793 AC012354.3-201ENST00000623734 483 ntBASIC27.13■■□□□ 1.93
CLCN4P51793 AC060814.1-201ENST00000554326 538 ntBASIC27.12■■□□□ 1.93
CLCN4P51793 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CLCN4P51793 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CLCN4P51793 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC27.11■■□□□ 1.93
CLCN4P51793 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
CLCN4P51793 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
CLCN4P51793 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
CLCN4P51793 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC27.11■■□□□ 1.93
CLCN4P51793 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CLCN4P51793 ST7-202ENST00000323984 2142 ntTSL 5 BASIC27.1■■□□□ 1.93
CLCN4P51793 ST7-207ENST00000393449 2127 ntTSL 5 BASIC27.1■■□□□ 1.93
CLCN4P51793 RPS2-210ENST00000530225 765 ntTSL 2 BASIC27.1■■□□□ 1.93
CLCN4P51793 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CLCN4P51793 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CLCN4P51793 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CLCN4P51793 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
CLCN4P51793 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC27.08■■□□□ 1.93
CLCN4P51793 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC27.07■■□□□ 1.92
CLCN4P51793 MIR219A2-201ENST00000608502 1504 ntBASIC27.06■■□□□ 1.92
CLCN4P51793 PEX7-203ENST00000541292 945 ntTSL 5 BASIC27.06■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms