Protein–RNA interactions for Protein: P51684

CCR6, C-C chemokine receptor type 6, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR6P51684 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCR6P51684 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCR6P51684 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.87■■□□□ 1.09
CCR6P51684 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.87■■□□□ 1.09
CCR6P51684 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCR6P51684 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC21.86■■□□□ 1.09
CCR6P51684 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.86■■□□□ 1.09
CCR6P51684 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCR6P51684 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.86■■□□□ 1.09
CCR6P51684 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCR6P51684 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.85■■□□□ 1.09
CCR6P51684 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
CCR6P51684 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCR6P51684 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.84■■□□□ 1.09
CCR6P51684 AC006077.2-201ENST00000623591 457 ntBASIC21.84■■□□□ 1.09
CCR6P51684 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCR6P51684 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CCR6P51684 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCR6P51684 LINC01003-201ENST00000564834 1764 ntBASIC21.83■■□□□ 1.09
CCR6P51684 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CCR6P51684 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CCR6P51684 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCR6P51684 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCR6P51684 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC21.82■■□□□ 1.08
CCR6P51684 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.82■■□□□ 1.08
CCR6P51684 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CCR6P51684 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCR6P51684 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.82■■□□□ 1.08
CCR6P51684 AC091060.1-201ENST00000623524 1766 ntBASIC21.81■■□□□ 1.08
CCR6P51684 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
CCR6P51684 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.81■■□□□ 1.08
CCR6P51684 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCR6P51684 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
CCR6P51684 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.8■■□□□ 1.08
CCR6P51684 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.79■■□□□ 1.08
CCR6P51684 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.79■■□□□ 1.08
CCR6P51684 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC21.79■■□□□ 1.08
CCR6P51684 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC21.79■■□□□ 1.08
CCR6P51684 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCR6P51684 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.79■■□□□ 1.08
CCR6P51684 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCR6P51684 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCR6P51684 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
CCR6P51684 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCR6P51684 AC020928.2-201ENST00000588717 2197 ntBASIC21.78■■□□□ 1.08
CCR6P51684 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCR6P51684 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
CCR6P51684 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCR6P51684 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CCR6P51684 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCR6P51684 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCR6P51684 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.77■■□□□ 1.08
CCR6P51684 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCR6P51684 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCR6P51684 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CCR6P51684 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CCR6P51684 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCR6P51684 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC21.76■■□□□ 1.07
CCR6P51684 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCR6P51684 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCR6P51684 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCR6P51684 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCR6P51684 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCR6P51684 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCR6P51684 AC010864.1-201ENST00000609407 1511 ntBASIC21.74■■□□□ 1.07
CCR6P51684 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCR6P51684 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCR6P51684 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCR6P51684 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.73■■□□□ 1.07
CCR6P51684 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCR6P51684 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCR6P51684 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCR6P51684 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCR6P51684 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
CCR6P51684 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCR6P51684 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCR6P51684 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCR6P51684 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
CCR6P51684 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.71■■□□□ 1.07
CCR6P51684 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCR6P51684 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCR6P51684 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCR6P51684 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.7■■□□□ 1.06
CCR6P51684 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCR6P51684 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.69■■□□□ 1.06
CCR6P51684 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCR6P51684 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.69■■□□□ 1.06
CCR6P51684 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CCR6P51684 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCR6P51684 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCR6P51684 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCR6P51684 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCR6P51684 AC093323.1-202ENST00000635031 2045 ntBASIC21.67■■□□□ 1.06
CCR6P51684 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
CCR6P51684 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCR6P51684 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCR6P51684 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCR6P51684 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCR6P51684 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCR6P51684 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms