Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
THBS3P49746 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.97■□□□□ 0.95
THBS3P49746 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
THBS3P49746 DUX4L28-201ENST00000623687 678 ntBASIC20.97■□□□□ 0.95
THBS3P49746 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
THBS3P49746 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
THBS3P49746 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
THBS3P49746 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
THBS3P49746 AC005559.1-201ENST00000589661 871 ntBASIC20.96■□□□□ 0.95
THBS3P49746 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
THBS3P49746 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
THBS3P49746 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
THBS3P49746 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC20.95■□□□□ 0.94
THBS3P49746 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
THBS3P49746 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
THBS3P49746 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
THBS3P49746 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.94■□□□□ 0.94
THBS3P49746 AC087741.3-201ENST00000624270 1347 ntBASIC20.94■□□□□ 0.94
THBS3P49746 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
THBS3P49746 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
THBS3P49746 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
THBS3P49746 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
THBS3P49746 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
THBS3P49746 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
THBS3P49746 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.92■□□□□ 0.94
THBS3P49746 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.92■□□□□ 0.94
THBS3P49746 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.92■□□□□ 0.94
THBS3P49746 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
THBS3P49746 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.92■□□□□ 0.94
THBS3P49746 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
THBS3P49746 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
THBS3P49746 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
THBS3P49746 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
THBS3P49746 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC20.91■□□□□ 0.94
THBS3P49746 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
THBS3P49746 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.91■□□□□ 0.94
THBS3P49746 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
THBS3P49746 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.9■□□□□ 0.94
THBS3P49746 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
THBS3P49746 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
THBS3P49746 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.89■□□□□ 0.94
THBS3P49746 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
THBS3P49746 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.89■□□□□ 0.94
THBS3P49746 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.89■□□□□ 0.94
THBS3P49746 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.89■□□□□ 0.94
THBS3P49746 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.89■□□□□ 0.93
THBS3P49746 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
THBS3P49746 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
THBS3P49746 AC044849.2-201ENST00000606596 710 ntBASIC20.88■□□□□ 0.93
THBS3P49746 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
THBS3P49746 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
THBS3P49746 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
THBS3P49746 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
THBS3P49746 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
THBS3P49746 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
THBS3P49746 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
THBS3P49746 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.87■□□□□ 0.93
THBS3P49746 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
THBS3P49746 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
THBS3P49746 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
THBS3P49746 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
THBS3P49746 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
THBS3P49746 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
THBS3P49746 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.86■□□□□ 0.93
THBS3P49746 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
THBS3P49746 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
THBS3P49746 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.85■□□□□ 0.93
THBS3P49746 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
THBS3P49746 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
THBS3P49746 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.85■□□□□ 0.93
THBS3P49746 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
THBS3P49746 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
THBS3P49746 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
THBS3P49746 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.85■□□□□ 0.93
THBS3P49746 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
THBS3P49746 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
THBS3P49746 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
THBS3P49746 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
THBS3P49746 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
THBS3P49746 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.83■□□□□ 0.93
THBS3P49746 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.83■□□□□ 0.93
THBS3P49746 AC108673.1-201ENST00000510422 1159 ntBASIC20.83■□□□□ 0.93
THBS3P49746 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
THBS3P49746 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
THBS3P49746 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
THBS3P49746 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
THBS3P49746 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
THBS3P49746 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
THBS3P49746 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.81■□□□□ 0.92
THBS3P49746 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
THBS3P49746 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
THBS3P49746 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
THBS3P49746 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
THBS3P49746 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
THBS3P49746 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
THBS3P49746 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
THBS3P49746 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
THBS3P49746 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
THBS3P49746 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
THBS3P49746 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms