Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC26.04■■□□□ 1.76
RETP07949 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
RETP07949 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RETP07949 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC26.02■■□□□ 1.76
RETP07949 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
RETP07949 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC26.02■■□□□ 1.76
RETP07949 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RETP07949 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC26.01■■□□□ 1.75
RETP07949 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
RETP07949 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
RETP07949 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
RETP07949 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
RETP07949 AC008813.1-201ENST00000536597 885 ntBASIC26■■□□□ 1.75
RETP07949 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC26■■□□□ 1.75
RETP07949 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
RETP07949 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC25.99■■□□□ 1.75
RETP07949 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
RETP07949 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
RETP07949 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC25.97■■□□□ 1.75
RETP07949 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
RETP07949 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
RETP07949 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
RETP07949 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC25.96■■□□□ 1.75
RETP07949 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC25.96■■□□□ 1.75
RETP07949 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC25.96■■□□□ 1.75
RETP07949 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
RETP07949 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC25.95■■□□□ 1.75
RETP07949 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
RETP07949 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
RETP07949 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC25.95■■□□□ 1.74
RETP07949 LINC00273-201ENST00000539813 1452 ntBASIC25.94■■□□□ 1.74
RETP07949 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC25.94■■□□□ 1.74
RETP07949 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
RETP07949 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
RETP07949 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
RETP07949 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
RETP07949 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
RETP07949 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC25.92■■□□□ 1.74
RETP07949 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC25.92■■□□□ 1.74
RETP07949 AC120057.4-201ENST00000624722 1615 ntBASIC25.92■■□□□ 1.74
RETP07949 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
RETP07949 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
RETP07949 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
RETP07949 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.74
RETP07949 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC25.89■■□□□ 1.74
RETP07949 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
RETP07949 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
RETP07949 U85056.1-201ENST00000616429 682 ntBASIC25.88■■□□□ 1.73
RETP07949 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
RETP07949 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
RETP07949 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
RETP07949 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
RETP07949 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
RETP07949 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC25.86■■□□□ 1.73
RETP07949 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
RETP07949 HYI-213ENST00000583037 1322 ntTSL 5 BASIC25.86■■□□□ 1.73
RETP07949 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
RETP07949 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
RETP07949 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC25.85■■□□□ 1.73
RETP07949 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
RETP07949 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
RETP07949 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC25.84■■□□□ 1.73
RETP07949 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC25.84■■□□□ 1.73
RETP07949 TSPY13P-201ENST00000338964 914 ntBASIC25.83■■□□□ 1.73
RETP07949 ABCB10P1-201ENST00000614297 2181 ntBASIC25.82■■□□□ 1.72
RETP07949 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC25.82■■□□□ 1.72
RETP07949 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC25.82■■□□□ 1.72
RETP07949 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
RETP07949 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RETP07949 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
RETP07949 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
RETP07949 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
RETP07949 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC25.8■■□□□ 1.72
RETP07949 GFER-205ENST00000569451 517 ntTSL 5 BASIC25.8■■□□□ 1.72
RETP07949 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC25.79■■□□□ 1.72
RETP07949 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC25.79■■□□□ 1.72
RETP07949 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
RETP07949 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
RETP07949 RARRES2P1-201ENST00000474487 481 ntBASIC25.78■■□□□ 1.72
RETP07949 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC25.78■■□□□ 1.72
RETP07949 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC25.77■■□□□ 1.72
RETP07949 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
RETP07949 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC25.77■■□□□ 1.72
RETP07949 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
RETP07949 AC004987.1-201ENST00000428627 508 ntBASIC25.76■■□□□ 1.71
RETP07949 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
RETP07949 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
RETP07949 ATP5G2P3-201ENST00000429083 425 ntBASIC25.75■■□□□ 1.71
RETP07949 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
RETP07949 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC25.74■■□□□ 1.71
RETP07949 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
RETP07949 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
RETP07949 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC25.73■■□□□ 1.71
RETP07949 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC25.73■■□□□ 1.71
RETP07949 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RETP07949 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RETP07949 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
RETP07949 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RETP07949 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
RETP07949 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms