Protein–RNA interactions for Protein: P07498

CSN3, Kappa-casein, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSN3P07498 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CSN3P07498 EI24-212ENST00000615917 1407 ntTSL 2 BASIC19.85■□□□□ 0.77
CSN3P07498 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CSN3P07498 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CSN3P07498 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CSN3P07498 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CSN3P07498 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC19.83■□□□□ 0.76
CSN3P07498 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CSN3P07498 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CSN3P07498 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CSN3P07498 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CSN3P07498 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CSN3P07498 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CSN3P07498 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC19.81■□□□□ 0.76
CSN3P07498 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC19.81■□□□□ 0.76
CSN3P07498 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CSN3P07498 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CSN3P07498 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CSN3P07498 ST7-AS1-201ENST00000456775 1889 ntBASIC19.8■□□□□ 0.76
CSN3P07498 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CSN3P07498 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CSN3P07498 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC19.8■□□□□ 0.76
CSN3P07498 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC19.8■□□□□ 0.76
CSN3P07498 MIR7108-201ENST00000614319 87 ntBASIC19.8■□□□□ 0.76
CSN3P07498 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CSN3P07498 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CSN3P07498 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CSN3P07498 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
CSN3P07498 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CSN3P07498 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
CSN3P07498 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CSN3P07498 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CSN3P07498 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.79■□□□□ 0.76
CSN3P07498 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CSN3P07498 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CSN3P07498 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CSN3P07498 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC19.78■□□□□ 0.76
CSN3P07498 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CSN3P07498 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC19.78■□□□□ 0.76
CSN3P07498 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CSN3P07498 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CSN3P07498 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC19.78■□□□□ 0.76
CSN3P07498 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CSN3P07498 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CSN3P07498 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CSN3P07498 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CSN3P07498 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CSN3P07498 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CSN3P07498 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CSN3P07498 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CSN3P07498 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.76■□□□□ 0.75
CSN3P07498 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CSN3P07498 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CSN3P07498 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CSN3P07498 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CSN3P07498 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CSN3P07498 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CSN3P07498 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CSN3P07498 AC127502.1-201ENST00000399971 1502 ntBASIC19.75■□□□□ 0.75
CSN3P07498 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CSN3P07498 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC19.75■□□□□ 0.75
CSN3P07498 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
CSN3P07498 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CSN3P07498 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CSN3P07498 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CSN3P07498 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CSN3P07498 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.73■□□□□ 0.75
CSN3P07498 CALM3-209ENST00000597743 577 ntTSL 4 BASIC19.73■□□□□ 0.75
CSN3P07498 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CSN3P07498 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC19.72■□□□□ 0.75
CSN3P07498 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSN3P07498 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CSN3P07498 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
CSN3P07498 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC19.71■□□□□ 0.75
CSN3P07498 PVT1-219ENST00000523427 938 ntTSL 3 BASIC19.71■□□□□ 0.75
CSN3P07498 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC19.71■□□□□ 0.75
CSN3P07498 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSN3P07498 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSN3P07498 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSN3P07498 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC19.71■□□□□ 0.75
CSN3P07498 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CSN3P07498 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CSN3P07498 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CSN3P07498 LINC01971-201ENST00000617888 1048 ntBASIC19.7■□□□□ 0.74
CSN3P07498 LINC00273-201ENST00000539813 1452 ntBASIC19.7■□□□□ 0.74
CSN3P07498 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC19.69■□□□□ 0.74
CSN3P07498 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC19.69■□□□□ 0.74
CSN3P07498 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CSN3P07498 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CSN3P07498 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CSN3P07498 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CSN3P07498 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC19.67■□□□□ 0.74
CSN3P07498 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CSN3P07498 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CSN3P07498 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CSN3P07498 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CSN3P07498 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC19.66■□□□□ 0.74
CSN3P07498 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CSN3P07498 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC19.66■□□□□ 0.74
CSN3P07498 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms