Protein–RNA interactions for Protein: A6NCQ9

RNF222, RING finger protein 222, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF222A6NCQ9 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
RNF222A6NCQ9 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.02■□□□□ 0.95
RNF222A6NCQ9 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
RNF222A6NCQ9 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
RNF222A6NCQ9 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21■□□□□ 0.95
RNF222A6NCQ9 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21■□□□□ 0.95
RNF222A6NCQ9 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RNF222A6NCQ9 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21■□□□□ 0.95
RNF222A6NCQ9 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF222A6NCQ9 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF222A6NCQ9 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
RNF222A6NCQ9 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
RNF222A6NCQ9 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.99■□□□□ 0.95
RNF222A6NCQ9 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.99■□□□□ 0.95
RNF222A6NCQ9 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
RNF222A6NCQ9 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF222A6NCQ9 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RNF222A6NCQ9 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
RNF222A6NCQ9 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF222A6NCQ9 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF222A6NCQ9 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF222A6NCQ9 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF222A6NCQ9 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
RNF222A6NCQ9 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RNF222A6NCQ9 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF222A6NCQ9 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RNF222A6NCQ9 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RNF222A6NCQ9 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.96■□□□□ 0.95
RNF222A6NCQ9 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF222A6NCQ9 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF222A6NCQ9 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF222A6NCQ9 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF222A6NCQ9 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF222A6NCQ9 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.95■□□□□ 0.94
RNF222A6NCQ9 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF222A6NCQ9 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RNF222A6NCQ9 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF222A6NCQ9 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.94■□□□□ 0.94
RNF222A6NCQ9 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF222A6NCQ9 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.94■□□□□ 0.94
RNF222A6NCQ9 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF222A6NCQ9 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF222A6NCQ9 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.93■□□□□ 0.94
RNF222A6NCQ9 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF222A6NCQ9 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF222A6NCQ9 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF222A6NCQ9 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC20.92■□□□□ 0.94
RNF222A6NCQ9 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF222A6NCQ9 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
RNF222A6NCQ9 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF222A6NCQ9 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RNF222A6NCQ9 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
RNF222A6NCQ9 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF222A6NCQ9 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RNF222A6NCQ9 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC20.9■□□□□ 0.94
RNF222A6NCQ9 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
RNF222A6NCQ9 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
RNF222A6NCQ9 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF222A6NCQ9 AC145676.1-201ENST00000514988 2004 ntBASIC20.88■□□□□ 0.93
RNF222A6NCQ9 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF222A6NCQ9 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RNF222A6NCQ9 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC20.88■□□□□ 0.93
RNF222A6NCQ9 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF222A6NCQ9 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF222A6NCQ9 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF222A6NCQ9 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.88■□□□□ 0.93
RNF222A6NCQ9 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF222A6NCQ9 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF222A6NCQ9 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF222A6NCQ9 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
RNF222A6NCQ9 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF222A6NCQ9 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF222A6NCQ9 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
RNF222A6NCQ9 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF222A6NCQ9 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
RNF222A6NCQ9 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF222A6NCQ9 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF222A6NCQ9 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
RNF222A6NCQ9 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RNF222A6NCQ9 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
RNF222A6NCQ9 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF222A6NCQ9 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.85■□□□□ 0.93
RNF222A6NCQ9 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF222A6NCQ9 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF222A6NCQ9 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.84■□□□□ 0.93
RNF222A6NCQ9 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF222A6NCQ9 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.84■□□□□ 0.93
RNF222A6NCQ9 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RNF222A6NCQ9 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF222A6NCQ9 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.83■□□□□ 0.93
RNF222A6NCQ9 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC20.83■□□□□ 0.93
RNF222A6NCQ9 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.83■□□□□ 0.92
RNF222A6NCQ9 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RNF222A6NCQ9 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
RNF222A6NCQ9 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.81■□□□□ 0.92
RNF222A6NCQ9 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RNF222A6NCQ9 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF222A6NCQ9 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RNF222A6NCQ9 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RNF222A6NCQ9 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms