Protein–RNA interactions for Protein: A5X5Y0

HTR3E, 5-hydroxytryptamine receptor 3E, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3EA5X5Y0 CHML-205ENST00000638160 705 ntTSL 3 BASIC23.46■■□□□ 1.35
HTR3EA5X5Y0 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
HTR3EA5X5Y0 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC23.45■■□□□ 1.34
HTR3EA5X5Y0 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC23.45■■□□□ 1.34
HTR3EA5X5Y0 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
HTR3EA5X5Y0 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
HTR3EA5X5Y0 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.44■■□□□ 1.34
HTR3EA5X5Y0 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
HTR3EA5X5Y0 MIR762-201ENST00000390236 83 ntBASIC23.43■■□□□ 1.34
HTR3EA5X5Y0 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC23.43■■□□□ 1.34
HTR3EA5X5Y0 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
HTR3EA5X5Y0 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
HTR3EA5X5Y0 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
HTR3EA5X5Y0 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC23.42■■□□□ 1.34
HTR3EA5X5Y0 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
HTR3EA5X5Y0 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
HTR3EA5X5Y0 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
HTR3EA5X5Y0 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
HTR3EA5X5Y0 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
HTR3EA5X5Y0 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
HTR3EA5X5Y0 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
HTR3EA5X5Y0 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
HTR3EA5X5Y0 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC23.41■■□□□ 1.34
HTR3EA5X5Y0 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC23.41■■□□□ 1.34
HTR3EA5X5Y0 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC23.41■■□□□ 1.34
HTR3EA5X5Y0 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.41■■□□□ 1.34
HTR3EA5X5Y0 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
HTR3EA5X5Y0 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC23.4■■□□□ 1.34
HTR3EA5X5Y0 DRD5P2-201ENST00000421395 2012 ntBASIC23.4■■□□□ 1.34
HTR3EA5X5Y0 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
HTR3EA5X5Y0 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.39■■□□□ 1.34
HTR3EA5X5Y0 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.39■■□□□ 1.34
HTR3EA5X5Y0 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.39■■□□□ 1.33
HTR3EA5X5Y0 AC127502.1-201ENST00000399971 1502 ntBASIC23.38■■□□□ 1.33
HTR3EA5X5Y0 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC23.38■■□□□ 1.33
HTR3EA5X5Y0 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
HTR3EA5X5Y0 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
HTR3EA5X5Y0 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC23.38■■□□□ 1.33
HTR3EA5X5Y0 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
HTR3EA5X5Y0 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
HTR3EA5X5Y0 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
HTR3EA5X5Y0 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
HTR3EA5X5Y0 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
HTR3EA5X5Y0 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
HTR3EA5X5Y0 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.37■■□□□ 1.33
HTR3EA5X5Y0 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
HTR3EA5X5Y0 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
HTR3EA5X5Y0 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
HTR3EA5X5Y0 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
HTR3EA5X5Y0 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
HTR3EA5X5Y0 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
HTR3EA5X5Y0 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC23.36■■□□□ 1.33
HTR3EA5X5Y0 RPS2-209ENST00000529806 993 ntTSL 3 BASIC23.36■■□□□ 1.33
HTR3EA5X5Y0 PROC-203ENST00000409048 1586 ntTSL 5 BASIC23.35■■□□□ 1.33
HTR3EA5X5Y0 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
HTR3EA5X5Y0 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
HTR3EA5X5Y0 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
HTR3EA5X5Y0 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
HTR3EA5X5Y0 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
HTR3EA5X5Y0 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
HTR3EA5X5Y0 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
HTR3EA5X5Y0 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.34■■□□□ 1.33
HTR3EA5X5Y0 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
HTR3EA5X5Y0 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23.33■■□□□ 1.33
HTR3EA5X5Y0 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
HTR3EA5X5Y0 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23.33■■□□□ 1.33
HTR3EA5X5Y0 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
HTR3EA5X5Y0 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC23.33■■□□□ 1.33
HTR3EA5X5Y0 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
HTR3EA5X5Y0 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC23.33■■□□□ 1.33
HTR3EA5X5Y0 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC23.33■■□□□ 1.32
HTR3EA5X5Y0 HNRNPLP2-201ENST00000568980 1570 ntBASIC23.32■■□□□ 1.32
HTR3EA5X5Y0 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
HTR3EA5X5Y0 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
HTR3EA5X5Y0 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
HTR3EA5X5Y0 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
HTR3EA5X5Y0 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.31■■□□□ 1.32
HTR3EA5X5Y0 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
HTR3EA5X5Y0 AC005559.1-201ENST00000589661 871 ntBASIC23.31■■□□□ 1.32
HTR3EA5X5Y0 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC23.31■■□□□ 1.32
HTR3EA5X5Y0 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC23.31■■□□□ 1.32
HTR3EA5X5Y0 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
HTR3EA5X5Y0 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.3■■□□□ 1.32
HTR3EA5X5Y0 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
HTR3EA5X5Y0 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
HTR3EA5X5Y0 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
HTR3EA5X5Y0 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC23.29■■□□□ 1.32
HTR3EA5X5Y0 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC23.29■■□□□ 1.32
HTR3EA5X5Y0 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.29■■□□□ 1.32
HTR3EA5X5Y0 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
HTR3EA5X5Y0 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
HTR3EA5X5Y0 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
HTR3EA5X5Y0 SUZ12P1-203ENST00000578195 985 ntBASIC23.28■■□□□ 1.32
HTR3EA5X5Y0 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC23.28■■□□□ 1.32
HTR3EA5X5Y0 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
HTR3EA5X5Y0 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
HTR3EA5X5Y0 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
HTR3EA5X5Y0 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
HTR3EA5X5Y0 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
HTR3EA5X5Y0 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms