Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TNFSF12-TNFSF13A0A0A6YY99 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.37■■□□□ 1.33
TNFSF12-TNFSF13A0A0A6YY99 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.37■■□□□ 1.33
TNFSF12-TNFSF13A0A0A6YY99 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC23.37■■□□□ 1.33
TNFSF12-TNFSF13A0A0A6YY99 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
TNFSF12-TNFSF13A0A0A6YY99 AC135983.2-203ENST00000454486 1613 ntBASIC23.36■■□□□ 1.33
TNFSF12-TNFSF13A0A0A6YY99 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TNFSF12-TNFSF13A0A0A6YY99 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.35■■□□□ 1.33
TNFSF12-TNFSF13A0A0A6YY99 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
TNFSF12-TNFSF13A0A0A6YY99 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TNFSF12-TNFSF13A0A0A6YY99 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.34■■□□□ 1.33
TNFSF12-TNFSF13A0A0A6YY99 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TNFSF12-TNFSF13A0A0A6YY99 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
TNFSF12-TNFSF13A0A0A6YY99 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TNFSF12-TNFSF13A0A0A6YY99 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC23.34■■□□□ 1.33
TNFSF12-TNFSF13A0A0A6YY99 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.34■■□□□ 1.33
TNFSF12-TNFSF13A0A0A6YY99 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.34■■□□□ 1.33
TNFSF12-TNFSF13A0A0A6YY99 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TNFSF12-TNFSF13A0A0A6YY99 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
TNFSF12-TNFSF13A0A0A6YY99 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC23.33■■□□□ 1.33
TNFSF12-TNFSF13A0A0A6YY99 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.32
TNFSF12-TNFSF13A0A0A6YY99 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
TNFSF12-TNFSF13A0A0A6YY99 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
TNFSF12-TNFSF13A0A0A6YY99 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.32■■□□□ 1.32
TNFSF12-TNFSF13A0A0A6YY99 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23.32■■□□□ 1.32
TNFSF12-TNFSF13A0A0A6YY99 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.32■■□□□ 1.32
TNFSF12-TNFSF13A0A0A6YY99 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TNFSF12-TNFSF13A0A0A6YY99 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC23.31■■□□□ 1.32
TNFSF12-TNFSF13A0A0A6YY99 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TNFSF12-TNFSF13A0A0A6YY99 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
TNFSF12-TNFSF13A0A0A6YY99 HLA-V-202ENST00000446817 847 ntBASIC23.31■■□□□ 1.32
TNFSF12-TNFSF13A0A0A6YY99 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.31■■□□□ 1.32
TNFSF12-TNFSF13A0A0A6YY99 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.3■■□□□ 1.32
TNFSF12-TNFSF13A0A0A6YY99 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.3■■□□□ 1.32
TNFSF12-TNFSF13A0A0A6YY99 WHAMMP2-203ENST00000563942 1603 ntBASIC23.3■■□□□ 1.32
TNFSF12-TNFSF13A0A0A6YY99 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TNFSF12-TNFSF13A0A0A6YY99 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TNFSF12-TNFSF13A0A0A6YY99 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.3■■□□□ 1.32
TNFSF12-TNFSF13A0A0A6YY99 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC23.3■■□□□ 1.32
TNFSF12-TNFSF13A0A0A6YY99 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TNFSF12-TNFSF13A0A0A6YY99 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TNFSF12-TNFSF13A0A0A6YY99 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TNFSF12-TNFSF13A0A0A6YY99 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
TNFSF12-TNFSF13A0A0A6YY99 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TNFSF12-TNFSF13A0A0A6YY99 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TNFSF12-TNFSF13A0A0A6YY99 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
TNFSF12-TNFSF13A0A0A6YY99 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TNFSF12-TNFSF13A0A0A6YY99 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.28■■□□□ 1.32
TNFSF12-TNFSF13A0A0A6YY99 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TNFSF12-TNFSF13A0A0A6YY99 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TNFSF12-TNFSF13A0A0A6YY99 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.27■■□□□ 1.32
TNFSF12-TNFSF13A0A0A6YY99 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.27■■□□□ 1.32
TNFSF12-TNFSF13A0A0A6YY99 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.27■■□□□ 1.32
TNFSF12-TNFSF13A0A0A6YY99 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
TNFSF12-TNFSF13A0A0A6YY99 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC23.26■■□□□ 1.31
TNFSF12-TNFSF13A0A0A6YY99 LINC01971-201ENST00000617888 1048 ntBASIC23.26■■□□□ 1.31
TNFSF12-TNFSF13A0A0A6YY99 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC23.26■■□□□ 1.31
TNFSF12-TNFSF13A0A0A6YY99 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.26■■□□□ 1.31
TNFSF12-TNFSF13A0A0A6YY99 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TNFSF12-TNFSF13A0A0A6YY99 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC23.26■■□□□ 1.31
TNFSF12-TNFSF13A0A0A6YY99 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC23.25■■□□□ 1.31
TNFSF12-TNFSF13A0A0A6YY99 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TNFSF12-TNFSF13A0A0A6YY99 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TNFSF12-TNFSF13A0A0A6YY99 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.24■■□□□ 1.31
TNFSF12-TNFSF13A0A0A6YY99 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
TNFSF12-TNFSF13A0A0A6YY99 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.24■■□□□ 1.31
TNFSF12-TNFSF13A0A0A6YY99 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.24■■□□□ 1.31
TNFSF12-TNFSF13A0A0A6YY99 AC100797.4-201ENST00000631653 1827 ntBASIC23.23■■□□□ 1.31
TNFSF12-TNFSF13A0A0A6YY99 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.23■■□□□ 1.31
TNFSF12-TNFSF13A0A0A6YY99 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.22■■□□□ 1.31
TNFSF12-TNFSF13A0A0A6YY99 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.22■■□□□ 1.31
TNFSF12-TNFSF13A0A0A6YY99 SHF-206ENST00000560471 2499 ntTSL 5 BASIC23.21■■□□□ 1.31
TNFSF12-TNFSF13A0A0A6YY99 DUX4L11-201ENST00000611504 1267 ntBASIC23.21■■□□□ 1.31
TNFSF12-TNFSF13A0A0A6YY99 DUX4L12-201ENST00000614593 1267 ntBASIC23.21■■□□□ 1.31
TNFSF12-TNFSF13A0A0A6YY99 DUX4L14-201ENST00000621227 1267 ntBASIC23.21■■□□□ 1.31
TNFSF12-TNFSF13A0A0A6YY99 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TNFSF12-TNFSF13A0A0A6YY99 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
TNFSF12-TNFSF13A0A0A6YY99 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TNFSF12-TNFSF13A0A0A6YY99 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TNFSF12-TNFSF13A0A0A6YY99 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TNFSF12-TNFSF13A0A0A6YY99 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TNFSF12-TNFSF13A0A0A6YY99 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TNFSF12-TNFSF13A0A0A6YY99 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.19■■□□□ 1.3
TNFSF12-TNFSF13A0A0A6YY99 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TNFSF12-TNFSF13A0A0A6YY99 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TNFSF12-TNFSF13A0A0A6YY99 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TNFSF12-TNFSF13A0A0A6YY99 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TNFSF12-TNFSF13A0A0A6YY99 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
TNFSF12-TNFSF13A0A0A6YY99 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
TNFSF12-TNFSF13A0A0A6YY99 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TNFSF12-TNFSF13A0A0A6YY99 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TNFSF12-TNFSF13A0A0A6YY99 MIR3648-2-201ENST00000581792 180 ntBASIC23.18■■□□□ 1.3
TNFSF12-TNFSF13A0A0A6YY99 MIR3648-1-201ENST00000615959 180 ntBASIC23.18■■□□□ 1.3
TNFSF12-TNFSF13A0A0A6YY99 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
TNFSF12-TNFSF13A0A0A6YY99 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.17■■□□□ 1.3
TNFSF12-TNFSF13A0A0A6YY99 DRD5P2-201ENST00000421395 2012 ntBASIC23.17■■□□□ 1.3
TNFSF12-TNFSF13A0A0A6YY99 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.17■■□□□ 1.3
TNFSF12-TNFSF13A0A0A6YY99 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TNFSF12-TNFSF13A0A0A6YY99 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TNFSF12-TNFSF13A0A0A6YY99 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.16■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms