Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC6.72□□□□□ -1.33
THBS1P07996 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC6.72□□□□□ -1.33
THBS1P07996 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC6.72□□□□□ -1.33
THBS1P07996 AC068714.1-201ENST00000559623 800 ntBASIC6.72□□□□□ -1.33
THBS1P07996 MIR4685-201ENST00000578185 69 ntBASIC6.72□□□□□ -1.33
THBS1P07996 MIR4742-201ENST00000581069 85 ntBASIC6.72□□□□□ -1.33
THBS1P07996 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC6.72□□□□□ -1.33
THBS1P07996 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC6.72□□□□□ -1.33
THBS1P07996 OR7E94P-202ENST00000601375 790 ntBASIC6.72□□□□□ -1.33
THBS1P07996 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
THBS1P07996 RNU6-87P-201ENST00000607561 108 ntBASIC6.72□□□□□ -1.33
THBS1P07996 AC006924.1-201ENST00000610750 559 ntBASIC6.72□□□□□ -1.33
THBS1P07996 PFKM-232ENST00000629846 381 ntTSL 4 BASIC6.72□□□□□ -1.33
THBS1P07996 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC6.72□□□□□ -1.33
THBS1P07996 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
THBS1P07996 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
THBS1P07996 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
THBS1P07996 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
THBS1P07996 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC6.72□□□□□ -1.33
THBS1P07996 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC6.72□□□□□ -1.33
THBS1P07996 AC046144.1-201ENST00000478559 1853 ntBASIC6.72□□□□□ -1.33
THBS1P07996 CASC19-260ENST00000641828 2001 ntBASIC6.72□□□□□ -1.33
THBS1P07996 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.72□□□□□ -1.33
THBS1P07996 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
THBS1P07996 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC6.72□□□□□ -1.33
THBS1P07996 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.72□□□□□ -1.33
THBS1P07996 SAMMSON-203ENST00000641005 2168 ntBASIC6.72□□□□□ -1.33
THBS1P07996 SSXP3-201ENST00000442971 1300 ntBASIC6.72□□□□□ -1.33
THBS1P07996 MTND4P1-201ENST00000457501 1466 ntBASIC6.72□□□□□ -1.33
THBS1P07996 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
THBS1P07996 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
THBS1P07996 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
THBS1P07996 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
THBS1P07996 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC6.72□□□□□ -1.33
THBS1P07996 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC6.72□□□□□ -1.33
THBS1P07996 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
THBS1P07996 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC6.71□□□□□ -1.33
THBS1P07996 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
THBS1P07996 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC6.71□□□□□ -1.33
THBS1P07996 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC6.71□□□□□ -1.33
THBS1P07996 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC6.71□□□□□ -1.33
THBS1P07996 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
THBS1P07996 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
THBS1P07996 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC6.71□□□□□ -1.33
THBS1P07996 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
THBS1P07996 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
THBS1P07996 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
THBS1P07996 MTND4P35-201ENST00000604257 1375 ntBASIC6.71□□□□□ -1.33
THBS1P07996 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
THBS1P07996 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
THBS1P07996 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
THBS1P07996 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
THBS1P07996 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.33
THBS1P07996 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC6.71□□□□□ -1.34
THBS1P07996 MFSD8-217ENST00000641178 4374 ntBASIC6.71□□□□□ -1.34
THBS1P07996 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
THBS1P07996 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC6.71□□□□□ -1.34
THBS1P07996 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
THBS1P07996 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
THBS1P07996 RNU6-223P-201ENST00000362830 107 ntBASIC6.71□□□□□ -1.34
THBS1P07996 Y_RNA.395-201ENST00000383945 109 ntBASIC6.71□□□□□ -1.34
THBS1P07996 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
THBS1P07996 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
THBS1P07996 MIR1204-201ENST00000408388 67 ntBASIC6.71□□□□□ -1.34
THBS1P07996 RNU6-1068P-201ENST00000410958 103 ntBASIC6.71□□□□□ -1.34
THBS1P07996 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC6.71□□□□□ -1.34
THBS1P07996 AL589872.1-201ENST00000426602 288 ntBASIC6.71□□□□□ -1.34
THBS1P07996 RPSAP62-201ENST00000432596 833 ntBASIC6.71□□□□□ -1.34
THBS1P07996 AL357552.2-201ENST00000433876 353 ntTSL 5 BASIC6.71□□□□□ -1.34
THBS1P07996 AC093716.1-201ENST00000435923 377 ntBASIC6.71□□□□□ -1.34
THBS1P07996 SNRPEP7-201ENST00000438350 220 ntBASIC6.71□□□□□ -1.34
THBS1P07996 RPS19P6-201ENST00000441327 433 ntBASIC6.71□□□□□ -1.34
THBS1P07996 SUMO1P2-201ENST00000452524 304 ntBASIC6.71□□□□□ -1.34
THBS1P07996 PSPC1P2-201ENST00000455130 225 ntBASIC6.71□□□□□ -1.34
THBS1P07996 AC004692.1-201ENST00000455430 424 ntBASIC6.71□□□□□ -1.34
THBS1P07996 AC013429.1-201ENST00000456604 422 ntBASIC6.71□□□□□ -1.34
THBS1P07996 NF1P3-201ENST00000457709 450 ntBASIC6.71□□□□□ -1.34
THBS1P07996 AC117395.2-201ENST00000463122 1128 ntBASIC6.71□□□□□ -1.34
THBS1P07996 AC021074.2-201ENST00000468434 172 ntBASIC6.71□□□□□ -1.34
THBS1P07996 GAPDHP56-201ENST00000506031 988 ntBASIC6.71□□□□□ -1.34
THBS1P07996 AC105417.1-201ENST00000514691 285 ntBASIC6.71□□□□□ -1.34
THBS1P07996 MTCO2P24-201ENST00000515611 426 ntBASIC6.71□□□□□ -1.34
THBS1P07996 SNORA40.12-201ENST00000516329 111 ntBASIC6.71□□□□□ -1.34
THBS1P07996 Vault.3-201ENST00000516676 95 ntBASIC6.71□□□□□ -1.34
THBS1P07996 RNA5SP75-201ENST00000516841 111 ntBASIC6.71□□□□□ -1.34
THBS1P07996 AP003032.1-201ENST00000526730 277 ntTSL 3 BASIC6.71□□□□□ -1.34
THBS1P07996 AP001994.1-201ENST00000527539 826 ntBASIC6.71□□□□□ -1.34
THBS1P07996 OR5BN1P-201ENST00000532955 829 ntBASIC6.71□□□□□ -1.34
THBS1P07996 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC6.71□□□□□ -1.34
THBS1P07996 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC6.71□□□□□ -1.34
THBS1P07996 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.71□□□□□ -1.34
THBS1P07996 MIR3135A-201ENST00000578460 77 ntBASIC6.71□□□□□ -1.34
THBS1P07996 ARGFXP2-201ENST00000579304 949 ntBASIC6.71□□□□□ -1.34
THBS1P07996 AP001180.3-201ENST00000582221 145 ntBASIC6.71□□□□□ -1.34
THBS1P07996 RN7SL697P-201ENST00000582484 299 ntBASIC6.71□□□□□ -1.34
THBS1P07996 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC6.71□□□□□ -1.34
THBS1P07996 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC6.71□□□□□ -1.34
THBS1P07996 AP001330.4-201ENST00000604350 154 ntBASIC6.71□□□□□ -1.34
THBS1P07996 RPS28P1-201ENST00000604589 187 ntBASIC6.71□□□□□ -1.34
THBS1P07996 AC009597.2-201ENST00000604659 592 ntBASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms