RNA–Protein interactions for RNA: ENST00000637804.1

MIR548A1HG-202, Transcript of MIR548A1 host gene, humanhuman

TSL 5 BASIC

Gene MIR548A1HG, Length 784 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548A1HG-202ENST00000637804 NISCHQ9Y2I1 1504 aa14.82□□□□□ -0.04
MIR548A1HG-202ENST00000637804 CCDC180Q9P1Z9 1646 aa12.62□□□□□ -0.39
MIR548A1HG-202ENST00000637804 ZCCHC6Q5VYS8 1495 aaKnown RBP12.53□□□□□ -0.4
MIR548A1HG-202ENST00000637804 DCAF1Q9Y4B6 1507 aa12.36□□□□□ -0.43
MIR548A1HG-202ENST00000637804 SHROOM4Q9ULL8 1493 aa12.3□□□□□ -0.44
MIR548A1HG-202ENST00000637804 CHIC1Q5VXU3 224 aa12.25□□□□□ -0.45
MIR548A1HG-202ENST00000637804 SUPT5HO00267 1087 aaKnown RBP12.18□□□□□ -0.46
MIR548A1HG-202ENST00000637804 MYO15BQ96JP2 1530 aa12.05□□□□□ -0.48
MIR548A1HG-202ENST00000637804 DCAF8L2P0C7V8 631 aa12.02□□□□□ -0.49
MIR548A1HG-202ENST00000637804 AEBP2Q6ZN18 517 aaPredicted RBP11.96□□□□□ -0.49
MIR548A1HG-202ENST00000637804 ABCC9O60706 1549 aa11.76□□□□□ -0.53
MIR548A1HG-202ENST00000637804 RSF1Q96T23 1441 aaPredicted RBP11.73□□□□□ -0.53
MIR548A1HG-202ENST00000637804 HRCP23327 699 aa11.72□□□□□ -0.53
MIR548A1HG-202ENST00000637804 NACADO15069 1562 aa11.71□□□□□ -0.53
MIR548A1HG-202ENST00000637804 RB1CC1Q8TDY2 1594 aa11.61□□□□□ -0.55
MIR548A1HG-202ENST00000637804 SCRIBQ14160 1630 aa11.56□□□□□ -0.56
MIR548A1HG-202ENST00000637804 PCGF6Q9BYE7 350 aa11.55□□□□□ -0.56
MIR548A1HG-202ENST00000637804 LOC105371045A0A1W2PR82 267 aa11.54□□□□□ -0.56
MIR548A1HG-202ENST00000637804 TRIM26Q12899 539 aaPredicted RBP11.54□□□□□ -0.56
MIR548A1HG-202ENST00000637804 TRIM41Q8WV44 630 aa11.51□□□□□ -0.57
MIR548A1HG-202ENST00000637804 CECR2Q9BXF3 1484 aa11.44□□□□□ -0.58
MIR548A1HG-202ENST00000637804 ZEB1P37275 1124 aaPredicted RBP11.43□□□□□ -0.58
MIR548A1HG-202ENST00000637804 MROH2BQ7Z745 1585 aa11.42□□□□□ -0.58
MIR548A1HG-202ENST00000637804 BAZ1AQ9NRL2 1556 aaPredicted RBP11.39□□□□□ -0.59
MIR548A1HG-202ENST00000637804 WIZO95785 1651 aa11.28□□□□□ -0.6
MIR548A1HG-202ENST00000637804 TOP2AP11388 1531 aaKnown RBP11.26□□□□□ -0.61
MIR548A1HG-202ENST00000637804 EIF4G1Q04637 1599 aaKnown RBP11.24□□□□□ -0.61
MIR548A1HG-202ENST00000637804 SMARCA4P51532 1647 aa11.21□□□□□ -0.61
MIR548A1HG-202ENST00000637804 EEA1Q15075 1411 aa11.21□□□□□ -0.61
MIR548A1HG-202ENST00000637804 PPARGC1BQ86YN6 1023 aaKnown RBP11.2□□□□□ -0.62
MIR548A1HG-202ENST00000637804 CCDC88BA6NC98 1476 aa11.19□□□□□ -0.62
MIR548A1HG-202ENST00000637804 FAM9AQ8IZU1 332 aaPredicted RBP11.19□□□□□ -0.62
MIR548A1HG-202ENST00000637804 WRNQ14191 1432 aaPredicted RBP eCLIP11.17□□□□□ -0.62
MIR548A1HG-202ENST00000637804 SMARCA2P51531 1590 aa11.15□□□□□ -0.62
MIR548A1HG-202ENST00000637804 PEG3Q9GZU2 1588 aa11.15□□□□□ -0.62
MIR548A1HG-202ENST00000637804 TNIKQ9UKE5 1360 aa11.13□□□□□ -0.63
MIR548A1HG-202ENST00000637804 CSRNP3Q8WYN3 585 aa11.1□□□□□ -0.63
MIR548A1HG-202ENST00000637804 BICRAQ9NZM4 1560 aa11.06□□□□□ -0.64
MIR548A1HG-202ENST00000637804 UNC13AQ9UPW8 1703 aa11.04□□□□□ -0.64
MIR548A1HG-202ENST00000637804 SOGA1O94964 1423 aa10.99□□□□□ -0.65
MIR548A1HG-202ENST00000637804 CEP162Q5TB80 1403 aa10.99□□□□□ -0.65
MIR548A1HG-202ENST00000637804 ABCC8Q09428 1581 aa10.99□□□□□ -0.65
MIR548A1HG-202ENST00000637804 ATAD2BQ9ULI0 1458 aa10.98□□□□□ -0.65
MIR548A1HG-202ENST00000637804 GOLGA3Q08378 1498 aa10.97□□□□□ -0.65
MIR548A1HG-202ENST00000637804 PABPN1Q86U42 306 aaKnown RBP eCLIP10.94□□□□□ -0.66
MIR548A1HG-202ENST00000637804 CEP164Q9UPV0 1460 aa10.93□□□□□ -0.66
MIR548A1HG-202ENST00000637804 BAZ1BQ9UIG0 1483 aaKnown RBP10.92□□□□□ -0.66
MIR548A1HG-202ENST00000637804 UBTFP17480 764 aaKnown RBP10.91□□□□□ -0.66
MIR548A1HG-202ENST00000637804 KIF21BO75037 1637 aa10.91□□□□□ -0.66
MIR548A1HG-202ENST00000637804 CCER1Q8TC90 406 aaPredicted RBP10.9□□□□□ -0.66
MIR548A1HG-202ENST00000637804 RUSC2Q8N2Y8 1516 aa10.89□□□□□ -0.67
MIR548A1HG-202ENST00000637804 EHMT2Q96KQ7 1210 aa10.89□□□□□ -0.67
MIR548A1HG-202ENST00000637804 NCAPD3P42695 1498 aa10.87□□□□□ -0.67
MIR548A1HG-202ENST00000637804 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.84□□□□□ -0.67
MIR548A1HG-202ENST00000637804 PHF23Q9BUL5 403 aaPredicted RBP10.84□□□□□ -0.67
MIR548A1HG-202ENST00000637804 SYNJ1O43426 1573 aa10.82□□□□□ -0.68
MIR548A1HG-202ENST00000637804 CLIP1P30622 1438 aa10.82□□□□□ -0.68
MIR548A1HG-202ENST00000637804 HMGXB3Q12766 1538 aa10.81□□□□□ -0.68
MIR548A1HG-202ENST00000637804 VPS8Q8N3P4 1428 aa10.81□□□□□ -0.68
MIR548A1HG-202ENST00000637804 TOP2BQ02880 1626 aa10.8□□□□□ -0.68
MIR548A1HG-202ENST00000637804 PELP1Q8IZL8 1130 aaKnown RBP10.8□□□□□ -0.68
MIR548A1HG-202ENST00000637804 CLSPNQ9HAW4 1339 aa10.78□□□□□ -0.68
MIR548A1HG-202ENST00000637804 ERICH3Q5RHP9 1530 aa10.78□□□□□ -0.68
MIR548A1HG-202ENST00000637804 PRXQ9BXM0 1461 aa10.77□□□□□ -0.69
MIR548A1HG-202ENST00000637804 APLP2Q06481 763 aa10.76□□□□□ -0.69
MIR548A1HG-202ENST00000637804 BIVM-ERCC5R4GMW8 1640 aa10.75□□□□□ -0.69
MIR548A1HG-202ENST00000637804 ZNF316A6NFI3 1004 aaPredicted RBP10.74□□□□□ -0.69
MIR548A1HG-202ENST00000637804 DIEXFQ68CQ4 756 aaKnown RBP10.74□□□□□ -0.69
MIR548A1HG-202ENST00000637804 CFTRP13569 1480 aa10.73□□□□□ -0.69
MIR548A1HG-202ENST00000637804 RAPGEF2Q9Y4G8 1499 aa10.73□□□□□ -0.69
MIR548A1HG-202ENST00000637804 ACIN1Q9UKV3 1341 aaKnown RBP10.71□□□□□ -0.69
MIR548A1HG-202ENST00000637804 KIF27Q86VH2 1401 aa10.7□□□□□ -0.7
MIR548A1HG-202ENST00000637804 CENPBP07199 599 aaPredicted RBP10.69□□□□□ -0.7
MIR548A1HG-202ENST00000637804 SCAF1Q9H7N4 1312 aaKnown RBP10.67□□□□□ -0.7
MIR548A1HG-202ENST00000637804 CUX1P39880 1505 aa10.63□□□□□ -0.71
MIR548A1HG-202ENST00000637804 MAP3K1Q13233 1512 aa10.63□□□□□ -0.71
MIR548A1HG-202ENST00000637804 CADPSQ9ULU8 1353 aa10.62□□□□□ -0.71
MIR548A1HG-202ENST00000637804 RRBP1Q9P2E9 1410 aaKnown RBP10.61□□□□□ -0.71
MIR548A1HG-202ENST00000637804 CUX2O14529 1486 aa10.61□□□□□ -0.71
MIR548A1HG-202ENST00000637804 ARAP1Q96P48 1450 aa10.61□□□□□ -0.71
MIR548A1HG-202ENST00000637804 IGF1RP08069 1367 aa10.6□□□□□ -0.71
MIR548A1HG-202ENST00000637804 HNRNPUL2Q1KMD3 747 aaKnown RBP10.59□□□□□ -0.71
MIR548A1HG-202ENST00000637804 NEUROD1Q13562 356 aa10.58□□□□□ -0.72
MIR548A1HG-202ENST00000637804 TTBK1Q5TCY1 1321 aaPredicted RBP10.57□□□□□ -0.72
MIR548A1HG-202ENST00000637804 DHX57Q6P158 1386 aaKnown RBP10.54□□□□□ -0.72
MIR548A1HG-202ENST00000637804 KANK4Q5T7N3 995 aaPredicted RBP10.54□□□□□ -0.72
MIR548A1HG-202ENST00000637804 ARHGAP35Q9NRY4 1499 aa10.54□□□□□ -0.72
MIR548A1HG-202ENST00000637804 CARMIL1Q5VZK9 1371 aa10.52□□□□□ -0.72
MIR548A1HG-202ENST00000637804 TIMELESSQ9UNS1 1208 aa10.52□□□□□ -0.73
MIR548A1HG-202ENST00000637804 CCNB3Q8WWL7 1395 aa10.51□□□□□ -0.73
MIR548A1HG-202ENST00000637804 PRDM2Q13029 1718 aa10.5□□□□□ -0.73
MIR548A1HG-202ENST00000637804 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.49□□□□□ -0.73
MIR548A1HG-202ENST00000637804 FHAD1B1AJZ9 1412 aa10.49□□□□□ -0.73
MIR548A1HG-202ENST00000637804 MIER1Q8N108 512 aa10.47□□□□□ -0.73
MIR548A1HG-202ENST00000637804 GTF3C3Q9Y5Q9 886 aa10.47□□□□□ -0.73
MIR548A1HG-202ENST00000637804 AQRO60306 1485 aaKnown RBP eCLIP10.44□□□□□ -0.74
MIR548A1HG-202ENST00000637804 FGD5Q6ZNL6 1462 aa10.44□□□□□ -0.74
MIR548A1HG-202ENST00000637804 ABCA10Q8WWZ4 1543 aa10.43□□□□□ -0.74
MIR548A1HG-202ENST00000637804 RANGAP1P46060 587 aaPredicted RBP10.42□□□□□ -0.74
MIR548A1HG-202ENST00000637804 LRRC9Q6ZRR7 1453 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms