RNA–Protein interactions for RNA: ENST00000604350.1

AP001330.4-201, humanhuman

BASIC

Gene AP001330.4, Length 154 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001330.4-201ENST00000604350 AEBP2Q6ZN18 517 aaPredicted RBP20.5■□□□□ 0.87
AP001330.4-201ENST00000604350 CHIC1Q5VXU3 224 aa19.6■□□□□ 0.73
AP001330.4-201ENST00000604350 SENP3Q9H4L4 574 aaPredicted RBP17.46■□□□□ 0.39
AP001330.4-201ENST00000604350 PHF23Q9BUL5 403 aaPredicted RBP17.22■□□□□ 0.35
AP001330.4-201ENST00000604350 FOXD1Q16676 465 aa16.25■□□□□ 0.19
AP001330.4-201ENST00000604350 PLPPR3Q6T4P5 718 aa15.7■□□□□ 0.1
AP001330.4-201ENST00000604350 PPP6R1Q9UPN7 881 aa15.29■□□□□ 0.04
AP001330.4-201ENST00000604350 ADRA2BP18089 450 aa15.2■□□□□ 0.02
AP001330.4-201ENST00000604350 PIAS4Q8N2W9 510 aaPredicted RBP15.18■□□□□ 0.02
AP001330.4-201ENST00000604350 MSH5O43196 834 aa15.17■□□□□ 0.02
AP001330.4-201ENST00000604350 POTEDQ86YR6 584 aa14.57□□□□□ -0.08
AP001330.4-201ENST00000604350 SCAF1Q9H7N4 1312 aaKnown RBP13.92□□□□□ -0.18
AP001330.4-201ENST00000604350 MAPK8IP2Q13387 824 aaPredicted RBP13.92□□□□□ -0.18
AP001330.4-201ENST00000604350 DMRT2Q9Y5R5 561 aa13.88□□□□□ -0.19
AP001330.4-201ENST00000604350 PPP4R3CPQ6ZMV5 832 aa13.76□□□□□ -0.21
AP001330.4-201ENST00000604350 CNKSR2Q8WXI2 1034 aa13.5□□□□□ -0.25
AP001330.4-201ENST00000604350 HOXD11P31277 338 aaPredicted RBP13.45□□□□□ -0.26
AP001330.4-201ENST00000604350 RNF216Q9NWF9 866 aaPredicted RBP13.36□□□□□ -0.27
AP001330.4-201ENST00000604350 NCBP3Q53F19 620 aaKnown RBP13.25□□□□□ -0.29
AP001330.4-201ENST00000604350 DCAF8L1A6NGE4 600 aa13.15□□□□□ -0.3
AP001330.4-201ENST00000604350 NPM3O75607 178 aaKnown RBP13.1□□□□□ -0.31
AP001330.4-201ENST00000604350 DNAJC5BQ9UF47 199 aa13.03□□□□□ -0.32
AP001330.4-201ENST00000604350 RNF39Q9H2S5 420 aa12.97□□□□□ -0.33
AP001330.4-201ENST00000604350 KCNA4P22459 653 aa12.94□□□□□ -0.34
AP001330.4-201ENST00000604350 CACNB1Q02641 598 aaPredicted RBP12.86□□□□□ -0.35
AP001330.4-201ENST00000604350 C1QBPQ07021 282 aaKnown RBP12.78□□□□□ -0.36
AP001330.4-201ENST00000604350 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.69□□□□□ -0.38
AP001330.4-201ENST00000604350 U3KPZ7 1027 aaPredicted RBP12.52□□□□□ -0.41
AP001330.4-201ENST00000604350 SLC4A2P04920 1241 aa12.49□□□□□ -0.41
AP001330.4-201ENST00000604350 SPINK5Q9NQ38 1064 aaPredicted RBP12.26□□□□□ -0.45
AP001330.4-201ENST00000604350 SLC4A1APQ9BWU0 796 aaKnown RBP12.22□□□□□ -0.45
AP001330.4-201ENST00000604350 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.2□□□□□ -0.46
AP001330.4-201ENST00000604350 HNRNPUL2Q1KMD3 747 aaKnown RBP12.2□□□□□ -0.46
AP001330.4-201ENST00000604350 CAPN15O75808 1086 aa12.19□□□□□ -0.46
AP001330.4-201ENST00000604350 DSG3P32926 999 aa12.18□□□□□ -0.46
AP001330.4-201ENST00000604350 APLP2Q06481 763 aa12.16□□□□□ -0.46
AP001330.4-201ENST00000604350 SAMD1Q6SPF0 538 aaPredicted RBP12.13□□□□□ -0.47
AP001330.4-201ENST00000604350 MYCNP04198 464 aaPredicted RBP12.12□□□□□ -0.47
AP001330.4-201ENST00000604350 ZNF219Q9P2Y4 722 aaPredicted RBP12.08□□□□□ -0.48
AP001330.4-201ENST00000604350 FOXD4L1Q9NU39 408 aa12.05□□□□□ -0.48
AP001330.4-201ENST00000604350 TRHP20396 242 aaPredicted RBP12.01□□□□□ -0.49
AP001330.4-201ENST00000604350 ZBTB22O15209 634 aa11.93□□□□□ -0.5
AP001330.4-201ENST00000604350 ABCB7O75027 752 aa11.92□□□□□ -0.5
AP001330.4-201ENST00000604350 ATF5Q9Y2D1 282 aaPredicted RBP11.81□□□□□ -0.52
AP001330.4-201ENST00000604350 POLA2Q14181 598 aa11.76□□□□□ -0.53
AP001330.4-201ENST00000604350 ATXN8OSP0DMR3 200 aa11.71□□□□□ -0.53
AP001330.4-201ENST00000604350 RBM42Q9BTD8 480 aaKnown RBP11.6□□□□□ -0.55
AP001330.4-201ENST00000604350 ZBTB12Q9Y330 459 aaPredicted RBP11.57□□□□□ -0.56
AP001330.4-201ENST00000604350 CSRNP3Q8WYN3 585 aa11.48□□□□□ -0.57
AP001330.4-201ENST00000604350 POTEHQ6S545 545 aa11.43□□□□□ -0.58
AP001330.4-201ENST00000604350 OSCARQ8IYS5 282 aa11.4□□□□□ -0.58
AP001330.4-201ENST00000604350 AKT1S1Q96B36 256 aa11.37□□□□□ -0.59
AP001330.4-201ENST00000604350 EHMT2Q96KQ7 1210 aa11.31□□□□□ -0.6
AP001330.4-201ENST00000604350 FBLN2P98095 1184 aa11.3□□□□□ -0.6
AP001330.4-201ENST00000604350 MKRN4PQ13434 485 aaPredicted RBP11.3□□□□□ -0.6
AP001330.4-201ENST00000604350 CHRDL2Q6WN34 429 aa11.28□□□□□ -0.6
AP001330.4-201ENST00000604350 SPDYE2BA6NHP3 402 aa11.24□□□□□ -0.61
AP001330.4-201ENST00000604350 SPDYE6P0CI01 402 aa11.24□□□□□ -0.61
AP001330.4-201ENST00000604350 SPDYE2Q495Y8 402 aa11.24□□□□□ -0.61
AP001330.4-201ENST00000604350 REM2Q8IYK8 340 aaPredicted RBP11.24□□□□□ -0.61
AP001330.4-201ENST00000604350 SSUH2Q9Y2M2 353 aa11.14□□□□□ -0.63
AP001330.4-201ENST00000604350 PITPNM1O00562 1244 aa11.12□□□□□ -0.63
AP001330.4-201ENST00000604350 ZNF692Q9BU19 519 aaPredicted RBP11.06□□□□□ -0.64
AP001330.4-201ENST00000604350 PIP4P2Q8N4L2 257 aa11.05□□□□□ -0.64
AP001330.4-201ENST00000604350 FXR2P51116 673 aaKnown RBP eCLIP11.04□□□□□ -0.64
AP001330.4-201ENST00000604350 SPDYE1Q8NFV5 336 aaPredicted RBP10.98□□□□□ -0.65
AP001330.4-201ENST00000604350 PABPN1Q86U42 306 aaKnown RBP eCLIP10.91□□□□□ -0.66
AP001330.4-201ENST00000604350 CLEC11AQ9Y240 323 aa10.89□□□□□ -0.67
AP001330.4-201ENST00000604350 PRKAR2AP13861 404 aaKnown RBP10.8□□□□□ -0.68
AP001330.4-201ENST00000604350 SPDYE4A6NLX3 237 aa10.78□□□□□ -0.68
AP001330.4-201ENST00000604350 SP7Q8TDD2 431 aaPredicted RBP10.78□□□□□ -0.68
AP001330.4-201ENST00000604350 PRR29P0C7W0 189 aa10.76□□□□□ -0.69
AP001330.4-201ENST00000604350 HAX1O00165 279 aa10.74□□□□□ -0.69
AP001330.4-201ENST00000604350 CHADLQ6NUI6 762 aa10.69□□□□□ -0.7
AP001330.4-201ENST00000604350 EVX2Q03828 476 aa10.68□□□□□ -0.7
AP001330.4-201ENST00000604350 C19orf67A6NJJ6 358 aa10.67□□□□□ -0.7
AP001330.4-201ENST00000604350 PROM2Q8N271 834 aa10.67□□□□□ -0.7
AP001330.4-201ENST00000604350 STAG3Q9UJ98 1225 aa10.67□□□□□ -0.7
AP001330.4-201ENST00000604350 FARP1Q9Y4F1 1045 aaPredicted RBP10.59□□□□□ -0.71
AP001330.4-201ENST00000604350 CREBZFQ9NS37 354 aa10.58□□□□□ -0.72
AP001330.4-201ENST00000604350 CD44P16070 742 aaKnown RBP10.48□□□□□ -0.73
AP001330.4-201ENST00000604350 MNX1P50219 401 aaPredicted RBP10.46□□□□□ -0.73
AP001330.4-201ENST00000604350 GABBR2O75899 941 aa10.44□□□□□ -0.74
AP001330.4-201ENST00000604350 CLCN6P51797 869 aa10.39□□□□□ -0.75
AP001330.4-201ENST00000604350 ZNF579Q8NAF0 562 aaKnown RBP10.38□□□□□ -0.75
AP001330.4-201ENST00000604350 NPM1P06748 294 aaKnown RBP eCLIP10.35□□□□□ -0.75
AP001330.4-201ENST00000604350 FKBP8Q14318 412 aa10.35□□□□□ -0.75
AP001330.4-201ENST00000604350 ZRANB1Q9UGI0 708 aa10.32□□□□□ -0.76
AP001330.4-201ENST00000604350 PAK3O75914 559 aaPredicted RBP10.27□□□□□ -0.77
AP001330.4-201ENST00000604350 POTEIP0CG38 1075 aa10.25□□□□□ -0.77
AP001330.4-201ENST00000604350 MIER1Q8N108 512 aa10.22□□□□□ -0.77
AP001330.4-201ENST00000604350 PLEKHG5O94827 1062 aa10.21□□□□□ -0.77
AP001330.4-201ENST00000604350 GALR2O43603 387 aaPredicted RBP10.2□□□□□ -0.78
AP001330.4-201ENST00000604350 PHF12Q96QT6 1004 aa10.2□□□□□ -0.78
AP001330.4-201ENST00000604350 CCDC61Q9Y6R9 512 aa10.17□□□□□ -0.78
AP001330.4-201ENST00000604350 PLCD3Q8N3E9 789 aa10.16□□□□□ -0.78
AP001330.4-201ENST00000604350 DCBLD2Q96PD2 775 aa10.15□□□□□ -0.78
AP001330.4-201ENST00000604350 ZBTB47Q9UFB7 747 aaPredicted RBP10.14□□□□□ -0.79
AP001330.4-201ENST00000604350 FBXO3Q9UK99 471 aa10.14□□□□□ -0.79
AP001330.4-201ENST00000604350 RASEFQ8IZ41 740 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms