RNA–Protein interactions for RNA: ENST00000496508.1

AC239809.3-214, humanhuman

TSL 2 BASIC

Gene AC239809.3, Length 2,513 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC239809.3-214ENST00000496508 AEBP2Q6ZN18 517 aaPredicted RBP18.66■□□□□ 0.58
AC239809.3-214ENST00000496508 CHIC1Q5VXU3 224 aa18.25■□□□□ 0.51
AC239809.3-214ENST00000496508 PHF23Q9BUL5 403 aaPredicted RBP16.13■□□□□ 0.17
AC239809.3-214ENST00000496508 SENP3Q9H4L4 574 aaPredicted RBP15.72■□□□□ 0.11
AC239809.3-214ENST00000496508 PLPPR3Q6T4P5 718 aa14.86□□□□□ -0.03
AC239809.3-214ENST00000496508 FOXD1Q16676 465 aa14.64□□□□□ -0.07
AC239809.3-214ENST00000496508 PPP6R1Q9UPN7 881 aa14.23□□□□□ -0.13
AC239809.3-214ENST00000496508 ADRA2BP18089 450 aa14.23□□□□□ -0.13
AC239809.3-214ENST00000496508 PIAS4Q8N2W9 510 aaPredicted RBP13.85□□□□□ -0.19
AC239809.3-214ENST00000496508 MSH5O43196 834 aa13.37□□□□□ -0.27
AC239809.3-214ENST00000496508 PPP4R3CPQ6ZMV5 832 aa13.15□□□□□ -0.3
AC239809.3-214ENST00000496508 KCNA4P22459 653 aa13.03□□□□□ -0.32
AC239809.3-214ENST00000496508 MAPK8IP2Q13387 824 aaPredicted RBP12.9□□□□□ -0.34
AC239809.3-214ENST00000496508 SCAF1Q9H7N4 1312 aaKnown RBP12.88□□□□□ -0.35
AC239809.3-214ENST00000496508 NCBP3Q53F19 620 aaKnown RBP12.77□□□□□ -0.37
AC239809.3-214ENST00000496508 CNKSR2Q8WXI2 1034 aa12.71□□□□□ -0.37
AC239809.3-214ENST00000496508 NPM3O75607 178 aaKnown RBP12.66□□□□□ -0.38
AC239809.3-214ENST00000496508 DMRT2Q9Y5R5 561 aa12.57□□□□□ -0.4
AC239809.3-214ENST00000496508 RNF216Q9NWF9 866 aaPredicted RBP12.43□□□□□ -0.42
AC239809.3-214ENST00000496508 SLC4A1APQ9BWU0 796 aaKnown RBP12.39□□□□□ -0.43
AC239809.3-214ENST00000496508 HOXD11P31277 338 aaPredicted RBP12.34□□□□□ -0.43
AC239809.3-214ENST00000496508 EHMT2Q96KQ7 1210 aa12.27□□□□□ -0.45
AC239809.3-214ENST00000496508 DCAF8L1A6NGE4 600 aa12.14□□□□□ -0.47
AC239809.3-214ENST00000496508 DNAJC5BQ9UF47 199 aa12.1□□□□□ -0.47
AC239809.3-214ENST00000496508 POTEDQ86YR6 584 aa12.06□□□□□ -0.48
AC239809.3-214ENST00000496508 ZBTB22O15209 634 aa12.01□□□□□ -0.49
AC239809.3-214ENST00000496508 CSRNP3Q8WYN3 585 aa12□□□□□ -0.49
AC239809.3-214ENST00000496508 SLC4A2P04920 1241 aa11.94□□□□□ -0.5
AC239809.3-214ENST00000496508 SLC24A1O60721 1099 aa11.89□□□□□ -0.51
AC239809.3-214ENST00000496508 FOXD4L1Q9NU39 408 aa11.88□□□□□ -0.51
AC239809.3-214ENST00000496508 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.83□□□□□ -0.52
AC239809.3-214ENST00000496508 U3KPZ7 1027 aaPredicted RBP11.65□□□□□ -0.54
AC239809.3-214ENST00000496508 MYCNP04198 464 aaPredicted RBP11.64□□□□□ -0.55
AC239809.3-214ENST00000496508 RNF39Q9H2S5 420 aa11.51□□□□□ -0.57
AC239809.3-214ENST00000496508 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.45□□□□□ -0.58
AC239809.3-214ENST00000496508 HNRNPUL2Q1KMD3 747 aaKnown RBP11.45□□□□□ -0.58
AC239809.3-214ENST00000496508 ATF5Q9Y2D1 282 aaPredicted RBP11.44□□□□□ -0.58
AC239809.3-214ENST00000496508 SAMD1Q6SPF0 538 aaPredicted RBP11.43□□□□□ -0.58
AC239809.3-214ENST00000496508 NISCHQ9Y2I1 1504 aa11.42□□□□□ -0.58
AC239809.3-214ENST00000496508 ATXN8OSP0DMR3 200 aa11.38□□□□□ -0.59
AC239809.3-214ENST00000496508 SPINK5Q9NQ38 1064 aaPredicted RBP11.34□□□□□ -0.59
AC239809.3-214ENST00000496508 C1QBPQ07021 282 aaKnown RBP11.34□□□□□ -0.59
AC239809.3-214ENST00000496508 CAPN15O75808 1086 aa11.27□□□□□ -0.61
AC239809.3-214ENST00000496508 TRHP20396 242 aaPredicted RBP11.26□□□□□ -0.61
AC239809.3-214ENST00000496508 APLP2Q06481 763 aa11.26□□□□□ -0.61
AC239809.3-214ENST00000496508 ZNF219Q9P2Y4 722 aaPredicted RBP11.18□□□□□ -0.62
AC239809.3-214ENST00000496508 CACNB1Q02641 598 aaPredicted RBP11.16□□□□□ -0.62
AC239809.3-214ENST00000496508 RTN4Q9NQC3 1192 aaKnown RBP11.16□□□□□ -0.62
AC239809.3-214ENST00000496508 ABCB7O75027 752 aa11.1□□□□□ -0.63
AC239809.3-214ENST00000496508 POLA2Q14181 598 aa11.08□□□□□ -0.64
AC239809.3-214ENST00000496508 DSG3P32926 999 aa11.02□□□□□ -0.65
AC239809.3-214ENST00000496508 AMER1Q5JTC6 1135 aaPredicted RBP11□□□□□ -0.65
AC239809.3-214ENST00000496508 MKRN4PQ13434 485 aaPredicted RBP10.9□□□□□ -0.66
AC239809.3-214ENST00000496508 FKBP8Q14318 412 aa10.86□□□□□ -0.67
AC239809.3-214ENST00000496508 FBLN2P98095 1184 aa10.84□□□□□ -0.67
AC239809.3-214ENST00000496508 ZBTB12Q9Y330 459 aaPredicted RBP10.78□□□□□ -0.68
AC239809.3-214ENST00000496508 OSCARQ8IYS5 282 aa10.72□□□□□ -0.69
AC239809.3-214ENST00000496508 SPDYE4A6NLX3 237 aa10.7□□□□□ -0.7
AC239809.3-214ENST00000496508 ZNF692Q9BU19 519 aaPredicted RBP10.58□□□□□ -0.72
AC239809.3-214ENST00000496508 SPDYE2BA6NHP3 402 aa10.53□□□□□ -0.72
AC239809.3-214ENST00000496508 SPDYE6P0CI01 402 aa10.53□□□□□ -0.72
AC239809.3-214ENST00000496508 SPDYE2Q495Y8 402 aa10.53□□□□□ -0.72
AC239809.3-214ENST00000496508 SSUH2Q9Y2M2 353 aa10.48□□□□□ -0.73
AC239809.3-214ENST00000496508 PABPN1Q86U42 306 aaKnown RBP eCLIP10.46□□□□□ -0.73
AC239809.3-214ENST00000496508 PROM2Q8N271 834 aa10.46□□□□□ -0.73
AC239809.3-214ENST00000496508 RBM42Q9BTD8 480 aaKnown RBP10.42□□□□□ -0.74
AC239809.3-214ENST00000496508 PRKCSHP14314 528 aaPredicted RBP10.4□□□□□ -0.74
AC239809.3-214ENST00000496508 DAXXQ9UER7 740 aaPredicted RBP10.35□□□□□ -0.75
AC239809.3-214ENST00000496508 FBXO3Q9UK99 471 aa10.34□□□□□ -0.75
AC239809.3-214ENST00000496508 AKT1S1Q96B36 256 aa10.33□□□□□ -0.76
AC239809.3-214ENST00000496508 REM2Q8IYK8 340 aaPredicted RBP10.3□□□□□ -0.76
AC239809.3-214ENST00000496508 CLEC11AQ9Y240 323 aa10.26□□□□□ -0.77
AC239809.3-214ENST00000496508 VASPP50552 380 aaPredicted RBP10.25□□□□□ -0.77
AC239809.3-214ENST00000496508 SPDYE1Q8NFV5 336 aaPredicted RBP10.21□□□□□ -0.77
AC239809.3-214ENST00000496508 STAG3Q9UJ98 1225 aa10.2□□□□□ -0.78
AC239809.3-214ENST00000496508 TAOK2Q9UL54 1235 aa10.19□□□□□ -0.78
AC239809.3-214ENST00000496508 PITPNM1O00562 1244 aa10.18□□□□□ -0.78
AC239809.3-214ENST00000496508 IFNLR1Q8IU57 520 aaPredicted RBP10.16□□□□□ -0.78
AC239809.3-214ENST00000496508 MIER1Q8N108 512 aa10.15□□□□□ -0.78
AC239809.3-214ENST00000496508 PLCD3Q8N3E9 789 aa10.14□□□□□ -0.79
AC239809.3-214ENST00000496508 PRR29P0C7W0 189 aa10.13□□□□□ -0.79
AC239809.3-214ENST00000496508 PLCB2Q00722 1185 aa10.13□□□□□ -0.79
AC239809.3-214ENST00000496508 BCANQ96GW7 911 aa10.13□□□□□ -0.79
AC239809.3-214ENST00000496508 KLHL34Q8N239 644 aa10.08□□□□□ -0.8
AC239809.3-214ENST00000496508 TIMELESSQ9UNS1 1208 aa10.05□□□□□ -0.8
AC239809.3-214ENST00000496508 ARXQ96QS3 562 aa10.03□□□□□ -0.8
AC239809.3-214ENST00000496508 CREBZFQ9NS37 354 aa10.03□□□□□ -0.8
AC239809.3-214ENST00000496508 PLEKHG5O94827 1062 aa10.02□□□□□ -0.8
AC239809.3-214ENST00000496508 CHADLQ6NUI6 762 aa10.01□□□□□ -0.81
AC239809.3-214ENST00000496508 CHRDL2Q6WN34 429 aa10.01□□□□□ -0.81
AC239809.3-214ENST00000496508 TPRNQ4KMQ1 711 aa10□□□□□ -0.81
AC239809.3-214ENST00000496508 HAP1P54257 671 aaPredicted RBP9.97□□□□□ -0.81
AC239809.3-214ENST00000496508 SPOCK2Q92563 424 aa9.96□□□□□ -0.82
AC239809.3-214ENST00000496508 PRKAR2AP13861 404 aaKnown RBP9.94□□□□□ -0.82
AC239809.3-214ENST00000496508 MNX1P50219 401 aaPredicted RBP9.93□□□□□ -0.82
AC239809.3-214ENST00000496508 FXR2P51116 673 aaKnown RBP eCLIP9.93□□□□□ -0.82
AC239809.3-214ENST00000496508 ZBTB47Q9UFB7 747 aaPredicted RBP9.93□□□□□ -0.82
AC239809.3-214ENST00000496508 PIP4P2Q8N4L2 257 aa9.92□□□□□ -0.82
AC239809.3-214ENST00000496508 TULP1O00294 542 aaPredicted RBP9.92□□□□□ -0.82
AC239809.3-214ENST00000496508 CCDC180Q9P1Z9 1646 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms