RNA–Protein interactions for RNA: ENST00000362830.1

RNU6-223P-201, Transcript of RNA, U6 small nuclear 223, pseudogene, humanhuman

BASIC

Gene RNU6-223P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-223P-201ENST00000362830 AEBP2Q6ZN18 517 aaPredicted RBP19.67■□□□□ 0.74
RNU6-223P-201ENST00000362830 CHIC1Q5VXU3 224 aa19.09■□□□□ 0.65
RNU6-223P-201ENST00000362830 SENP3Q9H4L4 574 aaPredicted RBP16.77■□□□□ 0.28
RNU6-223P-201ENST00000362830 PHF23Q9BUL5 403 aaPredicted RBP16.73■□□□□ 0.27
RNU6-223P-201ENST00000362830 FOXD1Q16676 465 aa15.54■□□□□ 0.08
RNU6-223P-201ENST00000362830 PLPPR3Q6T4P5 718 aa15.44■□□□□ 0.06
RNU6-223P-201ENST00000362830 PPP6R1Q9UPN7 881 aa14.81□□□□□ -0.04
RNU6-223P-201ENST00000362830 ADRA2BP18089 450 aa14.77□□□□□ -0.05
RNU6-223P-201ENST00000362830 PIAS4Q8N2W9 510 aaPredicted RBP14.6□□□□□ -0.07
RNU6-223P-201ENST00000362830 MSH5O43196 834 aa14.45□□□□□ -0.1
RNU6-223P-201ENST00000362830 SCAF1Q9H7N4 1312 aaKnown RBP13.61□□□□□ -0.23
RNU6-223P-201ENST00000362830 PPP4R3CPQ6ZMV5 832 aa13.55□□□□□ -0.24
RNU6-223P-201ENST00000362830 MAPK8IP2Q13387 824 aaPredicted RBP13.45□□□□□ -0.26
RNU6-223P-201ENST00000362830 POTEDQ86YR6 584 aa13.42□□□□□ -0.26
RNU6-223P-201ENST00000362830 DMRT2Q9Y5R5 561 aa13.35□□□□□ -0.27
RNU6-223P-201ENST00000362830 CNKSR2Q8WXI2 1034 aa13.24□□□□□ -0.29
RNU6-223P-201ENST00000362830 NCBP3Q53F19 620 aaKnown RBP13.18□□□□□ -0.3
RNU6-223P-201ENST00000362830 HOXD11P31277 338 aaPredicted RBP13.03□□□□□ -0.32
RNU6-223P-201ENST00000362830 RNF216Q9NWF9 866 aaPredicted RBP13.03□□□□□ -0.32
RNU6-223P-201ENST00000362830 KCNA4P22459 653 aa13□□□□□ -0.33
RNU6-223P-201ENST00000362830 NPM3O75607 178 aaKnown RBP12.94□□□□□ -0.34
RNU6-223P-201ENST00000362830 DNAJC5BQ9UF47 199 aa12.71□□□□□ -0.37
RNU6-223P-201ENST00000362830 DCAF8L1A6NGE4 600 aa12.7□□□□□ -0.38
RNU6-223P-201ENST00000362830 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.37□□□□□ -0.43
RNU6-223P-201ENST00000362830 SLC4A1APQ9BWU0 796 aaKnown RBP12.37□□□□□ -0.43
RNU6-223P-201ENST00000362830 RNF39Q9H2S5 420 aa12.35□□□□□ -0.43
RNU6-223P-201ENST00000362830 SLC4A2P04920 1241 aa12.27□□□□□ -0.45
RNU6-223P-201ENST00000362830 C1QBPQ07021 282 aaKnown RBP12.22□□□□□ -0.45
RNU6-223P-201ENST00000362830 U3KPZ7 1027 aaPredicted RBP12.15□□□□□ -0.46
RNU6-223P-201ENST00000362830 CACNB1Q02641 598 aaPredicted RBP12.12□□□□□ -0.47
RNU6-223P-201ENST00000362830 FOXD4L1Q9NU39 408 aa12.06□□□□□ -0.48
RNU6-223P-201ENST00000362830 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12□□□□□ -0.49
RNU6-223P-201ENST00000362830 HNRNPUL2Q1KMD3 747 aaKnown RBP12□□□□□ -0.49
RNU6-223P-201ENST00000362830 MYCNP04198 464 aaPredicted RBP11.98□□□□□ -0.49
RNU6-223P-201ENST00000362830 ZBTB22O15209 634 aa11.95□□□□□ -0.5
RNU6-223P-201ENST00000362830 SAMD1Q6SPF0 538 aaPredicted RBP11.93□□□□□ -0.5
RNU6-223P-201ENST00000362830 APLP2Q06481 763 aa11.92□□□□□ -0.5
RNU6-223P-201ENST00000362830 SPINK5Q9NQ38 1064 aaPredicted RBP11.83□□□□□ -0.52
RNU6-223P-201ENST00000362830 CAPN15O75808 1086 aa11.8□□□□□ -0.52
RNU6-223P-201ENST00000362830 CSRNP3Q8WYN3 585 aa11.78□□□□□ -0.52
RNU6-223P-201ENST00000362830 EHMT2Q96KQ7 1210 aa11.75□□□□□ -0.53
RNU6-223P-201ENST00000362830 ZNF219Q9P2Y4 722 aaPredicted RBP11.75□□□□□ -0.53
RNU6-223P-201ENST00000362830 ATXN8OSP0DMR3 200 aa11.7□□□□□ -0.54
RNU6-223P-201ENST00000362830 TRHP20396 242 aaPredicted RBP11.69□□□□□ -0.54
RNU6-223P-201ENST00000362830 DSG3P32926 999 aa11.68□□□□□ -0.54
RNU6-223P-201ENST00000362830 ATF5Q9Y2D1 282 aaPredicted RBP11.62□□□□□ -0.55
RNU6-223P-201ENST00000362830 ABCB7O75027 752 aa11.53□□□□□ -0.56
RNU6-223P-201ENST00000362830 POLA2Q14181 598 aa11.49□□□□□ -0.57
RNU6-223P-201ENST00000362830 ZBTB12Q9Y330 459 aaPredicted RBP11.35□□□□□ -0.59
RNU6-223P-201ENST00000362830 FBLN2P98095 1184 aa11.2□□□□□ -0.62
RNU6-223P-201ENST00000362830 RBM42Q9BTD8 480 aaKnown RBP11.17□□□□□ -0.62
RNU6-223P-201ENST00000362830 MKRN4PQ13434 485 aaPredicted RBP11.13□□□□□ -0.63
RNU6-223P-201ENST00000362830 OSCARQ8IYS5 282 aa11.08□□□□□ -0.64
RNU6-223P-201ENST00000362830 SPDYE2BA6NHP3 402 aa11.02□□□□□ -0.65
RNU6-223P-201ENST00000362830 SPDYE6P0CI01 402 aa11.02□□□□□ -0.65
RNU6-223P-201ENST00000362830 SPDYE2Q495Y8 402 aa11.02□□□□□ -0.65
RNU6-223P-201ENST00000362830 AKT1S1Q96B36 256 aa10.99□□□□□ -0.65
RNU6-223P-201ENST00000362830 ZNF692Q9BU19 519 aaPredicted RBP10.91□□□□□ -0.66
RNU6-223P-201ENST00000362830 SSUH2Q9Y2M2 353 aa10.9□□□□□ -0.66
RNU6-223P-201ENST00000362830 REM2Q8IYK8 340 aaPredicted RBP10.85□□□□□ -0.67
RNU6-223P-201ENST00000362830 SPDYE4A6NLX3 237 aa10.81□□□□□ -0.68
RNU6-223P-201ENST00000362830 PABPN1Q86U42 306 aaKnown RBP eCLIP10.75□□□□□ -0.69
RNU6-223P-201ENST00000362830 CHRDL2Q6WN34 429 aa10.73□□□□□ -0.69
RNU6-223P-201ENST00000362830 SPDYE1Q8NFV5 336 aaPredicted RBP10.72□□□□□ -0.69
RNU6-223P-201ENST00000362830 PITPNM1O00562 1244 aa10.71□□□□□ -0.69
RNU6-223P-201ENST00000362830 PROM2Q8N271 834 aa10.65□□□□□ -0.7
RNU6-223P-201ENST00000362830 FKBP8Q14318 412 aa10.63□□□□□ -0.71
RNU6-223P-201ENST00000362830 CLEC11AQ9Y240 323 aa10.62□□□□□ -0.71
RNU6-223P-201ENST00000362830 STAG3Q9UJ98 1225 aa10.61□□□□□ -0.71
RNU6-223P-201ENST00000362830 FXR2P51116 673 aaKnown RBP eCLIP10.59□□□□□ -0.71
RNU6-223P-201ENST00000362830 POTEHQ6S545 545 aa10.59□□□□□ -0.71
RNU6-223P-201ENST00000362830 PRR29P0C7W0 189 aa10.55□□□□□ -0.72
RNU6-223P-201ENST00000362830 PIP4P2Q8N4L2 257 aa10.55□□□□□ -0.72
RNU6-223P-201ENST00000362830 PRKAR2AP13861 404 aaKnown RBP10.44□□□□□ -0.74
RNU6-223P-201ENST00000362830 CHADLQ6NUI6 762 aa10.37□□□□□ -0.75
RNU6-223P-201ENST00000362830 FBXO3Q9UK99 471 aa10.37□□□□□ -0.75
RNU6-223P-201ENST00000362830 CREBZFQ9NS37 354 aa10.36□□□□□ -0.75
RNU6-223P-201ENST00000362830 FARP1Q9Y4F1 1045 aaPredicted RBP10.31□□□□□ -0.76
RNU6-223P-201ENST00000362830 PLEKHG5O94827 1062 aa10.26□□□□□ -0.77
RNU6-223P-201ENST00000362830 MIER1Q8N108 512 aa10.26□□□□□ -0.77
RNU6-223P-201ENST00000362830 HAX1O00165 279 aa10.25□□□□□ -0.77
RNU6-223P-201ENST00000362830 MNX1P50219 401 aaPredicted RBP10.25□□□□□ -0.77
RNU6-223P-201ENST00000362830 C19orf67A6NJJ6 358 aa10.23□□□□□ -0.77
RNU6-223P-201ENST00000362830 NPM1P06748 294 aaKnown RBP eCLIP10.22□□□□□ -0.77
RNU6-223P-201ENST00000362830 PLCD3Q8N3E9 789 aa10.22□□□□□ -0.77
RNU6-223P-201ENST00000362830 VASPP50552 380 aaPredicted RBP10.18□□□□□ -0.78
RNU6-223P-201ENST00000362830 ZBTB47Q9UFB7 747 aaPredicted RBP10.18□□□□□ -0.78
RNU6-223P-201ENST00000362830 EVX2Q03828 476 aa10.14□□□□□ -0.79
RNU6-223P-201ENST00000362830 CD44P16070 742 aaKnown RBP10.13□□□□□ -0.79
RNU6-223P-201ENST00000362830 SP7Q8TDD2 431 aaPredicted RBP10.12□□□□□ -0.79
RNU6-223P-201ENST00000362830 PAK3O75914 559 aaPredicted RBP10.08□□□□□ -0.8
RNU6-223P-201ENST00000362830 ZRANB1Q9UGI0 708 aa10.05□□□□□ -0.8
RNU6-223P-201ENST00000362830 CLCN6P51797 869 aa10.04□□□□□ -0.8
RNU6-223P-201ENST00000362830 NUBP1P53384 320 aa10.04□□□□□ -0.8
RNU6-223P-201ENST00000362830 IFNLR1Q8IU57 520 aaPredicted RBP10.03□□□□□ -0.8
RNU6-223P-201ENST00000362830 KLHL34Q8N239 644 aa10.03□□□□□ -0.8
RNU6-223P-201ENST00000362830 ZNF579Q8NAF0 562 aaKnown RBP10.02□□□□□ -0.81
RNU6-223P-201ENST00000362830 RASEFQ8IZ41 740 aa10□□□□□ -0.81
RNU6-223P-201ENST00000362830 TSPYL2Q9H2G4 693 aaPredicted RBP9.98□□□□□ -0.81
RNU6-223P-201ENST00000362830 GABBR2O75899 941 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms