RNA–Protein interactions for RNA: ENST00000602149.1

ZNF549-204, Transcript of zinc finger protein 549, humanhuman

TSL 1 (best) BASIC

Gene ZNF549, Length 5,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549-204ENST00000602149 NISCHQ9Y2I1 1504 aa13.64□□□□□ -0.23
ZNF549-204ENST00000602149 DCAF8L2P0C7V8 631 aa12.72□□□□□ -0.37
ZNF549-204ENST00000602149 SHROOM4Q9ULL8 1493 aa12.24□□□□□ -0.45
ZNF549-204ENST00000602149 SUPT5HO00267 1087 aaKnown RBP12□□□□□ -0.49
ZNF549-204ENST00000602149 FAM9AQ8IZU1 332 aaPredicted RBP11.99□□□□□ -0.49
ZNF549-204ENST00000602149 APLP2Q06481 763 aa11.55□□□□□ -0.56
ZNF549-204ENST00000602149 ABCC9O60706 1549 aa11.53□□□□□ -0.56
ZNF549-204ENST00000602149 EHMT2Q96KQ7 1210 aa11.44□□□□□ -0.58
ZNF549-204ENST00000602149 PELP1Q8IZL8 1130 aaKnown RBP11.4□□□□□ -0.58
ZNF549-204ENST00000602149 ZCCHC6Q5VYS8 1495 aaKnown RBP11.38□□□□□ -0.59
ZNF549-204ENST00000602149 CCDC180Q9P1Z9 1646 aa11.34□□□□□ -0.59
ZNF549-204ENST00000602149 PABPN1Q86U42 306 aaKnown RBP eCLIP11.23□□□□□ -0.61
ZNF549-204ENST00000602149 CHIC1Q5VXU3 224 aa11.14□□□□□ -0.63
ZNF549-204ENST00000602149 SCRIBQ14160 1630 aa11.12□□□□□ -0.63
ZNF549-204ENST00000602149 TRIM41Q8WV44 630 aa11.07□□□□□ -0.64
ZNF549-204ENST00000602149 LOC105371045A0A1W2PR82 267 aa11.05□□□□□ -0.64
ZNF549-204ENST00000602149 TTBK1Q5TCY1 1321 aaPredicted RBP11.04□□□□□ -0.64
ZNF549-204ENST00000602149 ATP1B4Q9UN42 357 aaPredicted RBP10.96□□□□□ -0.65
ZNF549-204ENST00000602149 RANGAP1P46060 587 aaPredicted RBP10.96□□□□□ -0.65
ZNF549-204ENST00000602149 UBTFP17480 764 aaKnown RBP10.95□□□□□ -0.66
ZNF549-204ENST00000602149 CCER1Q8TC90 406 aaPredicted RBP10.9□□□□□ -0.66
ZNF549-204ENST00000602149 PCGF6Q9BYE7 350 aa10.88□□□□□ -0.67
ZNF549-204ENST00000602149 CECR2Q9BXF3 1484 aa10.87□□□□□ -0.67
ZNF549-204ENST00000602149 DCAF1Q9Y4B6 1507 aa10.87□□□□□ -0.67
ZNF549-204ENST00000602149 PPARGC1BQ86YN6 1023 aaKnown RBP10.85□□□□□ -0.67
ZNF549-204ENST00000602149 MYT1LQ9UL68 1186 aa10.85□□□□□ -0.67
ZNF549-204ENST00000602149 RSF1Q96T23 1441 aaPredicted RBP10.84□□□□□ -0.67
ZNF549-204ENST00000602149 ERICH6Q7L0X2 663 aa10.84□□□□□ -0.67
ZNF549-204ENST00000602149 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.81□□□□□ -0.68
ZNF549-204ENST00000602149 HNRNPUL2Q1KMD3 747 aaKnown RBP10.81□□□□□ -0.68
ZNF549-204ENST00000602149 ZEB1P37275 1124 aaPredicted RBP10.79□□□□□ -0.68
ZNF549-204ENST00000602149 NACADO15069 1562 aa10.79□□□□□ -0.68
ZNF549-204ENST00000602149 MYO15BQ96JP2 1530 aa10.78□□□□□ -0.68
ZNF549-204ENST00000602149 RB1CC1Q8TDY2 1594 aa10.76□□□□□ -0.69
ZNF549-204ENST00000602149 CENPBP07199 599 aaPredicted RBP10.71□□□□□ -0.69
ZNF549-204ENST00000602149 MROH2BQ7Z745 1585 aa10.7□□□□□ -0.7
ZNF549-204ENST00000602149 NEFLP07196 543 aa10.62□□□□□ -0.71
ZNF549-204ENST00000602149 WIZO95785 1651 aa10.57□□□□□ -0.72
ZNF549-204ENST00000602149 NPM1P06748 294 aaKnown RBP eCLIP10.56□□□□□ -0.72
ZNF549-204ENST00000602149 YTHDC1Q96MU7 727 aaKnown RBP10.55□□□□□ -0.72
ZNF549-204ENST00000602149 CDK11AQ9UQ88 783 aaPredicted RBP10.54□□□□□ -0.72
ZNF549-204ENST00000602149 FBLN2P98095 1184 aa10.52□□□□□ -0.73
ZNF549-204ENST00000602149 BAZ1AQ9NRL2 1556 aaPredicted RBP10.51□□□□□ -0.73
ZNF549-204ENST00000602149 POLR3GLQ9BT43 218 aa10.48□□□□□ -0.73
ZNF549-204ENST00000602149 ESF1Q9H501 851 aaKnown RBP10.47□□□□□ -0.73
ZNF549-204ENST00000602149 TRIM26Q12899 539 aaPredicted RBP10.45□□□□□ -0.74
ZNF549-204ENST00000602149 CCDC88BA6NC98 1476 aa10.44□□□□□ -0.74
ZNF549-204ENST00000602149 CSRNP3Q8WYN3 585 aa10.44□□□□□ -0.74
ZNF549-204ENST00000602149 ITGAEP38570 1179 aa10.44□□□□□ -0.74
ZNF549-204ENST00000602149 ABCC8Q09428 1581 aa10.42□□□□□ -0.74
ZNF549-204ENST00000602149 DAXXQ9UER7 740 aaPredicted RBP10.41□□□□□ -0.74
ZNF549-204ENST00000602149 BAZ1BQ9UIG0 1483 aaKnown RBP10.4□□□□□ -0.74
ZNF549-204ENST00000602149 SLC4A1APQ9BWU0 796 aaKnown RBP10.37□□□□□ -0.75
ZNF549-204ENST00000602149 SMARCA4P51532 1647 aa10.37□□□□□ -0.75
ZNF549-204ENST00000602149 SOGA1O94964 1423 aa10.36□□□□□ -0.75
ZNF549-204ENST00000602149 HRCP23327 699 aa10.36□□□□□ -0.75
ZNF549-204ENST00000602149 MYT1Q01538 1121 aa10.36□□□□□ -0.75
ZNF549-204ENST00000602149 CNGB1Q14028 1251 aaPredicted RBP10.36□□□□□ -0.75
ZNF549-204ENST00000602149 ACIN1Q9UKV3 1341 aaKnown RBP10.35□□□□□ -0.75
ZNF549-204ENST00000602149 ATAD2BQ9ULI0 1458 aa10.33□□□□□ -0.76
ZNF549-204ENST00000602149 BICRAQ9NZM4 1560 aa10.33□□□□□ -0.76
ZNF549-204ENST00000602149 P3H3Q8IVL6 736 aa10.32□□□□□ -0.76
ZNF549-204ENST00000602149 WRNQ14191 1432 aaPredicted RBP eCLIP10.31□□□□□ -0.76
ZNF549-204ENST00000602149 NEFMP07197 916 aa10.3□□□□□ -0.76
ZNF549-204ENST00000602149 DNAJC5BQ9UF47 199 aa10.3□□□□□ -0.76
ZNF549-204ENST00000602149 FAM50AQ14320 339 aaKnown RBP10.3□□□□□ -0.76
ZNF549-204ENST00000602149 TOP2AP11388 1531 aaKnown RBP10.29□□□□□ -0.76
ZNF549-204ENST00000602149 TRIM52Q96A61 297 aa10.29□□□□□ -0.76
ZNF549-204ENST00000602149 RUSC2Q8N2Y8 1516 aa10.29□□□□□ -0.76
ZNF549-204ENST00000602149 CHMP7Q8WUX9 453 aaPredicted RBP10.28□□□□□ -0.76
ZNF549-204ENST00000602149 UNC13AQ9UPW8 1703 aa10.27□□□□□ -0.77
ZNF549-204ENST00000602149 ZBTB47Q9UFB7 747 aaPredicted RBP10.27□□□□□ -0.77
ZNF549-204ENST00000602149 ERCC6Q03468 1493 aa10.26□□□□□ -0.77
ZNF549-204ENST00000602149 BCANQ96GW7 911 aa10.25□□□□□ -0.77
ZNF549-204ENST00000602149 SMARCA2P51531 1590 aa10.24□□□□□ -0.77
ZNF549-204ENST00000602149 ARID3CA6NKF2 412 aa10.21□□□□□ -0.78
ZNF549-204ENST00000602149 STAG3Q9UJ98 1225 aa10.2□□□□□ -0.78
ZNF549-204ENST00000602149 CLSPNQ9HAW4 1339 aa10.18□□□□□ -0.78
ZNF549-204ENST00000602149 EEA1Q15075 1411 aa10.17□□□□□ -0.78
ZNF549-204ENST00000602149 EIF4G1Q04637 1599 aaKnown RBP10.17□□□□□ -0.78
ZNF549-204ENST00000602149 CEP162Q5TB80 1403 aa10.17□□□□□ -0.78
ZNF549-204ENST00000602149 ZNF316A6NFI3 1004 aaPredicted RBP10.14□□□□□ -0.79
ZNF549-204ENST00000602149 TSPY4P0CV99 314 aa10.12□□□□□ -0.79
ZNF549-204ENST00000602149 TSPY10P0CW01 314 aa10.12□□□□□ -0.79
ZNF549-204ENST00000602149 PDS5BQ9NTI5 1447 aa10.11□□□□□ -0.79
ZNF549-204ENST00000602149 ZNF777Q9ULD5 760 aaPredicted RBP10.11□□□□□ -0.79
ZNF549-204ENST00000602149 CLIP1P30622 1438 aa10.11□□□□□ -0.79
ZNF549-204ENST00000602149 CADPSQ9ULU8 1353 aa10.09□□□□□ -0.79
ZNF549-204ENST00000602149 NCAPD3P42695 1498 aa10.08□□□□□ -0.8
ZNF549-204ENST00000602149 TNIKQ9UKE5 1360 aa10.08□□□□□ -0.8
ZNF549-204ENST00000602149 GOLGA3Q08378 1498 aa10.07□□□□□ -0.8
ZNF549-204ENST00000602149 PLEKHD1A6NEE1 506 aa10.07□□□□□ -0.8
ZNF549-204ENST00000602149 CUX2O14529 1486 aa10.06□□□□□ -0.8
ZNF549-204ENST00000602149 NESP48681 1621 aa10.06□□□□□ -0.8
ZNF549-204ENST00000602149 TDRD9Q8NDG6 1382 aaKnown RBP10.06□□□□□ -0.8
ZNF549-204ENST00000602149 RAPGEF2Q9Y4G8 1499 aa10.05□□□□□ -0.8
ZNF549-204ENST00000602149 KIF27Q86VH2 1401 aa10.05□□□□□ -0.8
ZNF549-204ENST00000602149 RTL5Q5HYW3 569 aaPredicted RBP10.05□□□□□ -0.8
ZNF549-204ENST00000602149 NEUROD1Q13562 356 aa10.05□□□□□ -0.8
ZNF549-204ENST00000602149 SLC24A1O60721 1099 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms