RNA–Protein interactions for RNA: ENST00000516329.1

SNORA40.12-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 111 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.12-201ENST00000516329 AEBP2Q6ZN18 517 aaPredicted RBP19.47■□□□□ 0.71
SNORA40.12-201ENST00000516329 CHIC1Q5VXU3 224 aa18.84■□□□□ 0.61
SNORA40.12-201ENST00000516329 PHF23Q9BUL5 403 aaPredicted RBP16.57■□□□□ 0.24
SNORA40.12-201ENST00000516329 SENP3Q9H4L4 574 aaPredicted RBP16.51■□□□□ 0.23
SNORA40.12-201ENST00000516329 FOXD1Q16676 465 aa15.35■□□□□ 0.05
SNORA40.12-201ENST00000516329 PLPPR3Q6T4P5 718 aa15.23■□□□□ 0.03
SNORA40.12-201ENST00000516329 PPP6R1Q9UPN7 881 aa14.68□□□□□ -0.06
SNORA40.12-201ENST00000516329 ADRA2BP18089 450 aa14.67□□□□□ -0.06
SNORA40.12-201ENST00000516329 PIAS4Q8N2W9 510 aaPredicted RBP14.48□□□□□ -0.09
SNORA40.12-201ENST00000516329 MSH5O43196 834 aa14.2□□□□□ -0.14
SNORA40.12-201ENST00000516329 PPP4R3CPQ6ZMV5 832 aa13.42□□□□□ -0.26
SNORA40.12-201ENST00000516329 MAPK8IP2Q13387 824 aaPredicted RBP13.36□□□□□ -0.27
SNORA40.12-201ENST00000516329 SCAF1Q9H7N4 1312 aaKnown RBP13.36□□□□□ -0.27
SNORA40.12-201ENST00000516329 POTEDQ86YR6 584 aa13.22□□□□□ -0.29
SNORA40.12-201ENST00000516329 DMRT2Q9Y5R5 561 aa13.15□□□□□ -0.3
SNORA40.12-201ENST00000516329 CNKSR2Q8WXI2 1034 aa13.05□□□□□ -0.32
SNORA40.12-201ENST00000516329 NCBP3Q53F19 620 aaKnown RBP13.01□□□□□ -0.33
SNORA40.12-201ENST00000516329 KCNA4P22459 653 aa12.97□□□□□ -0.33
SNORA40.12-201ENST00000516329 NPM3O75607 178 aaKnown RBP12.84□□□□□ -0.35
SNORA40.12-201ENST00000516329 RNF216Q9NWF9 866 aaPredicted RBP12.83□□□□□ -0.36
SNORA40.12-201ENST00000516329 HOXD11P31277 338 aaPredicted RBP12.81□□□□□ -0.36
SNORA40.12-201ENST00000516329 DCAF8L1A6NGE4 600 aa12.68□□□□□ -0.38
SNORA40.12-201ENST00000516329 DNAJC5BQ9UF47 199 aa12.37□□□□□ -0.43
SNORA40.12-201ENST00000516329 SLC4A1APQ9BWU0 796 aaKnown RBP12.32□□□□□ -0.44
SNORA40.12-201ENST00000516329 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.27□□□□□ -0.45
SNORA40.12-201ENST00000516329 RNF39Q9H2S5 420 aa12.16□□□□□ -0.46
SNORA40.12-201ENST00000516329 SLC4A2P04920 1241 aa12.15□□□□□ -0.46
SNORA40.12-201ENST00000516329 U3KPZ7 1027 aaPredicted RBP12.03□□□□□ -0.48
SNORA40.12-201ENST00000516329 CACNB1Q02641 598 aaPredicted RBP11.99□□□□□ -0.49
SNORA40.12-201ENST00000516329 C1QBPQ07021 282 aaKnown RBP11.98□□□□□ -0.49
SNORA40.12-201ENST00000516329 FOXD4L1Q9NU39 408 aa11.96□□□□□ -0.49
SNORA40.12-201ENST00000516329 ZBTB22O15209 634 aa11.95□□□□□ -0.5
SNORA40.12-201ENST00000516329 EHMT2Q96KQ7 1210 aa11.87□□□□□ -0.51
SNORA40.12-201ENST00000516329 MYCNP04198 464 aaPredicted RBP11.86□□□□□ -0.51
SNORA40.12-201ENST00000516329 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.79□□□□□ -0.52
SNORA40.12-201ENST00000516329 HNRNPUL2Q1KMD3 747 aaKnown RBP11.79□□□□□ -0.52
SNORA40.12-201ENST00000516329 SPINK5Q9NQ38 1064 aaPredicted RBP11.77□□□□□ -0.53
SNORA40.12-201ENST00000516329 SAMD1Q6SPF0 538 aaPredicted RBP11.76□□□□□ -0.53
SNORA40.12-201ENST00000516329 CAPN15O75808 1086 aa11.73□□□□□ -0.53
SNORA40.12-201ENST00000516329 CSRNP3Q8WYN3 585 aa11.72□□□□□ -0.53
SNORA40.12-201ENST00000516329 APLP2Q06481 763 aa11.7□□□□□ -0.54
SNORA40.12-201ENST00000516329 TRHP20396 242 aaPredicted RBP11.65□□□□□ -0.54
SNORA40.12-201ENST00000516329 ZNF219Q9P2Y4 722 aaPredicted RBP11.59□□□□□ -0.55
SNORA40.12-201ENST00000516329 ATF5Q9Y2D1 282 aaPredicted RBP11.59□□□□□ -0.55
SNORA40.12-201ENST00000516329 ABCB7O75027 752 aa11.53□□□□□ -0.56
SNORA40.12-201ENST00000516329 DSG3P32926 999 aa11.52□□□□□ -0.57
SNORA40.12-201ENST00000516329 ATXN8OSP0DMR3 200 aa11.5□□□□□ -0.57
SNORA40.12-201ENST00000516329 POLA2Q14181 598 aa11.39□□□□□ -0.59
SNORA40.12-201ENST00000516329 ZBTB12Q9Y330 459 aaPredicted RBP11.16□□□□□ -0.62
SNORA40.12-201ENST00000516329 FBLN2P98095 1184 aa11.09□□□□□ -0.63
SNORA40.12-201ENST00000516329 MKRN4PQ13434 485 aaPredicted RBP11.06□□□□□ -0.64
SNORA40.12-201ENST00000516329 OSCARQ8IYS5 282 aa11.05□□□□□ -0.64
SNORA40.12-201ENST00000516329 RBM42Q9BTD8 480 aaKnown RBP10.97□□□□□ -0.65
SNORA40.12-201ENST00000516329 SPDYE2BA6NHP3 402 aa10.85□□□□□ -0.67
SNORA40.12-201ENST00000516329 SPDYE6P0CI01 402 aa10.85□□□□□ -0.67
SNORA40.12-201ENST00000516329 SPDYE2Q495Y8 402 aa10.85□□□□□ -0.67
SNORA40.12-201ENST00000516329 ZNF692Q9BU19 519 aaPredicted RBP10.81□□□□□ -0.68
SNORA40.12-201ENST00000516329 AKT1S1Q96B36 256 aa10.8□□□□□ -0.68
SNORA40.12-201ENST00000516329 SSUH2Q9Y2M2 353 aa10.76□□□□□ -0.69
SNORA40.12-201ENST00000516329 SPDYE4A6NLX3 237 aa10.75□□□□□ -0.69
SNORA40.12-201ENST00000516329 REM2Q8IYK8 340 aaPredicted RBP10.73□□□□□ -0.69
SNORA40.12-201ENST00000516329 PABPN1Q86U42 306 aaKnown RBP eCLIP10.68□□□□□ -0.7
SNORA40.12-201ENST00000516329 FKBP8Q14318 412 aa10.65□□□□□ -0.7
SNORA40.12-201ENST00000516329 PITPNM1O00562 1244 aa10.63□□□□□ -0.71
SNORA40.12-201ENST00000516329 CHRDL2Q6WN34 429 aa10.6□□□□□ -0.71
SNORA40.12-201ENST00000516329 CLEC11AQ9Y240 323 aa10.59□□□□□ -0.71
SNORA40.12-201ENST00000516329 SPDYE1Q8NFV5 336 aaPredicted RBP10.58□□□□□ -0.72
SNORA40.12-201ENST00000516329 PROM2Q8N271 834 aa10.49□□□□□ -0.73
SNORA40.12-201ENST00000516329 PIP4P2Q8N4L2 257 aa10.45□□□□□ -0.74
SNORA40.12-201ENST00000516329 PRR29P0C7W0 189 aa10.44□□□□□ -0.74
SNORA40.12-201ENST00000516329 POTEHQ6S545 545 aa10.44□□□□□ -0.74
SNORA40.12-201ENST00000516329 FXR2P51116 673 aaKnown RBP eCLIP10.42□□□□□ -0.74
SNORA40.12-201ENST00000516329 STAG3Q9UJ98 1225 aa10.42□□□□□ -0.74
SNORA40.12-201ENST00000516329 PRKAR2AP13861 404 aaKnown RBP10.36□□□□□ -0.75
SNORA40.12-201ENST00000516329 CHADLQ6NUI6 762 aa10.36□□□□□ -0.75
SNORA40.12-201ENST00000516329 CREBZFQ9NS37 354 aa10.27□□□□□ -0.77
SNORA40.12-201ENST00000516329 FBXO3Q9UK99 471 aa10.24□□□□□ -0.77
SNORA40.12-201ENST00000516329 MIER1Q8N108 512 aa10.21□□□□□ -0.77
SNORA40.12-201ENST00000516329 FARP1Q9Y4F1 1045 aaPredicted RBP10.2□□□□□ -0.78
SNORA40.12-201ENST00000516329 PLCD3Q8N3E9 789 aa10.19□□□□□ -0.78
SNORA40.12-201ENST00000516329 HAX1O00165 279 aa10.15□□□□□ -0.78
SNORA40.12-201ENST00000516329 PLEKHG5O94827 1062 aa10.15□□□□□ -0.78
SNORA40.12-201ENST00000516329 VASPP50552 380 aaPredicted RBP10.15□□□□□ -0.78
SNORA40.12-201ENST00000516329 MNX1P50219 401 aaPredicted RBP10.13□□□□□ -0.79
SNORA40.12-201ENST00000516329 NPM1P06748 294 aaKnown RBP eCLIP10.08□□□□□ -0.8
SNORA40.12-201ENST00000516329 C19orf67A6NJJ6 358 aa10.07□□□□□ -0.8
SNORA40.12-201ENST00000516329 CD44P16070 742 aaKnown RBP10.06□□□□□ -0.8
SNORA40.12-201ENST00000516329 EVX2Q03828 476 aa10.05□□□□□ -0.8
SNORA40.12-201ENST00000516329 KLHL34Q8N239 644 aa10.03□□□□□ -0.8
SNORA40.12-201ENST00000516329 ZBTB47Q9UFB7 747 aaPredicted RBP10.03□□□□□ -0.8
SNORA40.12-201ENST00000516329 IFNLR1Q8IU57 520 aaPredicted RBP9.99□□□□□ -0.81
SNORA40.12-201ENST00000516329 ZRANB1Q9UGI0 708 aa9.98□□□□□ -0.81
SNORA40.12-201ENST00000516329 PAK3O75914 559 aaPredicted RBP9.97□□□□□ -0.81
SNORA40.12-201ENST00000516329 SP7Q8TDD2 431 aaPredicted RBP9.97□□□□□ -0.81
SNORA40.12-201ENST00000516329 RASEFQ8IZ41 740 aa9.96□□□□□ -0.82
SNORA40.12-201ENST00000516329 TSPYL2Q9H2G4 693 aaPredicted RBP9.96□□□□□ -0.82
SNORA40.12-201ENST00000516329 NUBP1P53384 320 aa9.94□□□□□ -0.82
SNORA40.12-201ENST00000516329 PHF12Q96QT6 1004 aa9.9□□□□□ -0.82
SNORA40.12-201ENST00000516329 ZNF579Q8NAF0 562 aaKnown RBP9.89□□□□□ -0.83
SNORA40.12-201ENST00000516329 SPOCK2Q92563 424 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms