Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 GNA12-202ENST00000407653 3785 ntTSL 2 BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 ABCC12-201ENST00000311303 5168 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 GPR179-204ENST00000621958 7983 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 CMC1-205ENST00000466830 6033 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 FLNA-202ENST00000360319 8281 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 ZNF248-203ENST00000395867 5141 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 COPA-201ENST00000241704 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 SMYD1-201ENST00000419482 4433 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 ZFP57-202ENST00000376883 1980 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 PHKBP1-201ENST00000450951 1951 ntBASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 DNM1P35-201ENST00000501931 3188 ntTSL 2 BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 MCM3-205ENST00000596288 3169 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 PLEKHM3-204ENST00000457206 3689 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 DSG4-202ENST00000359747 4526 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 TIAM2-210ENST00000528391 3349 ntTSL 2 BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 IKZF4-202ENST00000431367 5021 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 C22orf15-201ENST00000305199 681 ntAPPRIS ALT2 TSL 3 BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 ACEA_U3.1-201ENST00000363057 217 ntBASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 RNU6-486P-201ENST00000363116 107 ntBASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 Y_RNA.245-201ENST00000364493 95 ntBASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 RNU6-60P-201ENST00000364792 103 ntBASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 KCNK16-201ENST00000373227 789 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 MIR548A2-201ENST00000384956 97 ntBASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 H2AFZP1-201ENST00000416034 395 ntBASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 ACTBP1-201ENST00000417985 1113 ntBASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 NDUFB4P3-201ENST00000418418 390 ntBASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 AL360181.2-201ENST00000424450 626 ntTSL 5 BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 AC098614.2-201ENST00000426040 255 ntBASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 SNRPGP10-201ENST00000432323 225 ntBASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 AL139237.1-201ENST00000446107 513 ntTSL 2 BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 HNRNPA1P73-201ENST00000446472 928 ntBASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 AC006517.1-201ENST00000480485 328 ntBASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 RPL21P129-201ENST00000491732 478 ntBASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 LINC01341-204ENST00000505748 595 ntTSL 4 BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 RNU6-240P-201ENST00000516098 97 ntBASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 AC011676.4-201ENST00000523604 413 ntTSL 3 BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 AL355075.5-201ENST00000553568 890 ntBASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 ENPP7P13-201ENST00000567922 259 ntBASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 MIR3689A-201ENST00000578854 78 ntBASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 MIR5003-201ENST00000581891 99 ntBASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 AL020997.2-201ENST00000602607 184 ntBASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 FAM229B-202ENST00000604268 598 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 uc_338.4-201ENST00000616635 176 ntBASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 Metazoa_SRP.54-201ENST00000620533 282 ntBASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 U3.53-201ENST00000628922 216 ntBASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 AL356289.1-201ENST00000635446 743 ntTSL 3 BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 RHOH-201ENST00000381799 4305 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 DMD-209ENST00000378702 2617 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 ARHGAP20-202ENST00000524756 6180 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 ATP7B-204ENST00000400370 3252 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 SMG1P3-205ENST00000522480 4262 ntBASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 SELP-202ENST00000367786 2402 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 SEZ6L2-204ENST00000537485 3423 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 LRAT-201ENST00000336356 4928 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 SIN3A-202ENST00000394947 6737 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 GOLGA8EP-202ENST00000620011 5241 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 HCK-211ENST00000639405 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 ZP2-203ENST00000574002 2749 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 CACNA1F-201ENST00000323022 6037 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 MRAS-201ENST00000289104 4538 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 NWD1-206ENST00000552788 6964 ntAPPRIS P5 TSL 5 BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 SYNJ2-204ENST00000367122 3029 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 EIF4G1-221ENST00000441154 4311 ntTSL 5 BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 GOLGA6A-201ENST00000290438 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 MADD-204ENST00000395336 5942 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 ITGA10-201ENST00000369304 5269 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 DENND4C-205ENST00000434457 6718 ntTSL 5 BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 ABCC8-201ENST00000302539 4923 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 RBBP5-202ENST00000367164 4290 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 REV3L-201ENST00000358835 10815 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 TRERF1-203ENST00000372917 3914 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 HIVEP1-201ENST00000379388 9027 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 HIVEP1-208ENST00000541134 9023 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 OLFML2A-201ENST00000288815 5964 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.56
KRTAP3-3Q9BYR6 SPTB-204ENST00000389722 10063 ntTSL 2 BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 SLC22A11-201ENST00000301891 3860 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 MAP2K4-202ENST00000415385 3856 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 PRKAB2-201ENST00000254101 5417 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 PROM2-202ENST00000317668 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 RFX2-201ENST00000303657 3993 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 EPB41-207ENST00000373800 2853 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 CD33-204ENST00000436584 1494 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 SETDB2-203ENST00000354234 6139 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 SGCD-201ENST00000337851 1606 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 MBNL1-AS1-202ENST00000608395 6585 ntTSL 2 BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 GULP1-201ENST00000359135 3347 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 KMT2A-201ENST00000389506 13655 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 MMS19-209ENST00000438925 3797 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 160.2 ms