RNA–Protein interactions for RNA: ENST00000516098.1

RNU6-240P-201, Transcript of RNA, U6 small nuclear 240, pseudogene, humanhuman

BASIC

Gene RNU6-240P, Length 97 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-240P-201ENST00000516098 AEBP2Q6ZN18 517 aaPredicted RBP11.82□□□□□ -0.52
RNU6-240P-201ENST00000516098 CHIC1Q5VXU3 224 aa11.16□□□□□ -0.62
RNU6-240P-201ENST00000516098 SENP3Q9H4L4 574 aaPredicted RBP10.21□□□□□ -0.77
RNU6-240P-201ENST00000516098 PHF23Q9BUL5 403 aaPredicted RBP10□□□□□ -0.81
RNU6-240P-201ENST00000516098 FOXD1Q16676 465 aa9.47□□□□□ -0.89
RNU6-240P-201ENST00000516098 POTEDQ86YR6 584 aa9.04□□□□□ -0.96
RNU6-240P-201ENST00000516098 MSH5O43196 834 aa9.03□□□□□ -0.96
RNU6-240P-201ENST00000516098 PIAS4Q8N2W9 510 aaPredicted RBP8.84□□□□□ -0.99
RNU6-240P-201ENST00000516098 PLPPR3Q6T4P5 718 aa8.83□□□□□ -1
RNU6-240P-201ENST00000516098 PPP6R1Q9UPN7 881 aa8.67□□□□□ -1.02
RNU6-240P-201ENST00000516098 ADRA2BP18089 450 aa8.64□□□□□ -1.03
RNU6-240P-201ENST00000516098 DMRT2Q9Y5R5 561 aa8.05□□□□□ -1.12
RNU6-240P-201ENST00000516098 SCAF1Q9H7N4 1312 aaKnown RBP8.03□□□□□ -1.12
RNU6-240P-201ENST00000516098 MAPK8IP2Q13387 824 aaPredicted RBP7.97□□□□□ -1.13
RNU6-240P-201ENST00000516098 CACNB1Q02641 598 aaPredicted RBP7.81□□□□□ -1.16
RNU6-240P-201ENST00000516098 DCAF8L1A6NGE4 600 aa7.7□□□□□ -1.18
RNU6-240P-201ENST00000516098 HOXD11P31277 338 aaPredicted RBP7.69□□□□□ -1.18
RNU6-240P-201ENST00000516098 PPP4R3CPQ6ZMV5 832 aa7.68□□□□□ -1.18
RNU6-240P-201ENST00000516098 RNF39Q9H2S5 420 aa7.64□□□□□ -1.19
RNU6-240P-201ENST00000516098 CNKSR2Q8WXI2 1034 aa7.61□□□□□ -1.19
RNU6-240P-201ENST00000516098 RNF216Q9NWF9 866 aaPredicted RBP7.59□□□□□ -1.19
RNU6-240P-201ENST00000516098 C1QBPQ07021 282 aaKnown RBP7.55□□□□□ -1.2
RNU6-240P-201ENST00000516098 DNAJC5BQ9UF47 199 aa7.53□□□□□ -1.2
RNU6-240P-201ENST00000516098 NCBP3Q53F19 620 aaKnown RBP7.39□□□□□ -1.23
RNU6-240P-201ENST00000516098 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.32□□□□□ -1.24
RNU6-240P-201ENST00000516098 NPM3O75607 178 aaKnown RBP7.21□□□□□ -1.26
RNU6-240P-201ENST00000516098 U3KPZ7 1027 aaPredicted RBP7.11□□□□□ -1.27
RNU6-240P-201ENST00000516098 CAPN15O75808 1086 aa7.08□□□□□ -1.28
RNU6-240P-201ENST00000516098 DSG3P32926 999 aa7.08□□□□□ -1.28
RNU6-240P-201ENST00000516098 POTEHQ6S545 545 aa7.07□□□□□ -1.28
RNU6-240P-201ENST00000516098 SPINK5Q9NQ38 1064 aaPredicted RBP7.04□□□□□ -1.28
RNU6-240P-201ENST00000516098 APLP2Q06481 763 aa7.02□□□□□ -1.29
RNU6-240P-201ENST00000516098 ZNF219Q9P2Y4 722 aaPredicted RBP6.96□□□□□ -1.3
RNU6-240P-201ENST00000516098 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.95□□□□□ -1.3
RNU6-240P-201ENST00000516098 HNRNPUL2Q1KMD3 747 aaKnown RBP6.95□□□□□ -1.3
RNU6-240P-201ENST00000516098 SLC4A2P04920 1241 aa6.91□□□□□ -1.3
RNU6-240P-201ENST00000516098 TRHP20396 242 aaPredicted RBP6.91□□□□□ -1.3
RNU6-240P-201ENST00000516098 KCNA4P22459 653 aa6.88□□□□□ -1.31
RNU6-240P-201ENST00000516098 SAMD1Q6SPF0 538 aaPredicted RBP6.87□□□□□ -1.31
RNU6-240P-201ENST00000516098 ABCB7O75027 752 aa6.86□□□□□ -1.31
RNU6-240P-201ENST00000516098 RBM42Q9BTD8 480 aaKnown RBP6.83□□□□□ -1.32
RNU6-240P-201ENST00000516098 MYCNP04198 464 aaPredicted RBP6.73□□□□□ -1.33
RNU6-240P-201ENST00000516098 CHRDL2Q6WN34 429 aa6.69□□□□□ -1.34
RNU6-240P-201ENST00000516098 POLA2Q14181 598 aa6.68□□□□□ -1.34
RNU6-240P-201ENST00000516098 ZBTB12Q9Y330 459 aaPredicted RBP6.63□□□□□ -1.35
RNU6-240P-201ENST00000516098 AKT1S1Q96B36 256 aa6.61□□□□□ -1.35
RNU6-240P-201ENST00000516098 SP7Q8TDD2 431 aaPredicted RBP6.55□□□□□ -1.36
RNU6-240P-201ENST00000516098 FOXD4L1Q9NU39 408 aa6.55□□□□□ -1.36
RNU6-240P-201ENST00000516098 REM2Q8IYK8 340 aaPredicted RBP6.5□□□□□ -1.37
RNU6-240P-201ENST00000516098 SLC4A1APQ9BWU0 796 aaKnown RBP6.5□□□□□ -1.37
RNU6-240P-201ENST00000516098 ATF5Q9Y2D1 282 aaPredicted RBP6.49□□□□□ -1.37
RNU6-240P-201ENST00000516098 OSCARQ8IYS5 282 aa6.48□□□□□ -1.37
RNU6-240P-201ENST00000516098 PIP4P2Q8N4L2 257 aa6.48□□□□□ -1.37
RNU6-240P-201ENST00000516098 PITPNM1O00562 1244 aa6.43□□□□□ -1.38
RNU6-240P-201ENST00000516098 FXR2P51116 673 aaKnown RBP eCLIP6.43□□□□□ -1.38
RNU6-240P-201ENST00000516098 HAX1O00165 279 aa6.42□□□□□ -1.38
RNU6-240P-201ENST00000516098 ATXN8OSP0DMR3 200 aa6.4□□□□□ -1.38
RNU6-240P-201ENST00000516098 SPDYE2BA6NHP3 402 aa6.37□□□□□ -1.39
RNU6-240P-201ENST00000516098 SPDYE6P0CI01 402 aa6.37□□□□□ -1.39
RNU6-240P-201ENST00000516098 SPDYE2Q495Y8 402 aa6.37□□□□□ -1.39
RNU6-240P-201ENST00000516098 FBLN2P98095 1184 aa6.36□□□□□ -1.39
RNU6-240P-201ENST00000516098 ZBTB22O15209 634 aa6.3□□□□□ -1.4
RNU6-240P-201ENST00000516098 SPDYE1Q8NFV5 336 aaPredicted RBP6.3□□□□□ -1.4
RNU6-240P-201ENST00000516098 PRKAR2AP13861 404 aaKnown RBP6.27□□□□□ -1.41
RNU6-240P-201ENST00000516098 EVX2Q03828 476 aa6.25□□□□□ -1.41
RNU6-240P-201ENST00000516098 CLEC11AQ9Y240 323 aa6.25□□□□□ -1.41
RNU6-240P-201ENST00000516098 SSUH2Q9Y2M2 353 aa6.24□□□□□ -1.41
RNU6-240P-201ENST00000516098 C19orf67A6NJJ6 358 aa6.23□□□□□ -1.41
RNU6-240P-201ENST00000516098 ZNF692Q9BU19 519 aaPredicted RBP6.23□□□□□ -1.41
RNU6-240P-201ENST00000516098 MKRN4PQ13434 485 aaPredicted RBP6.2□□□□□ -1.42
RNU6-240P-201ENST00000516098 GABBR2O75899 941 aa6.16□□□□□ -1.42
RNU6-240P-201ENST00000516098 PRR29P0C7W0 189 aa6.15□□□□□ -1.42
RNU6-240P-201ENST00000516098 LHX8Q68G74 356 aa6.13□□□□□ -1.43
RNU6-240P-201ENST00000516098 CLCN6P51797 869 aa6.12□□□□□ -1.43
RNU6-240P-201ENST00000516098 CHADLQ6NUI6 762 aa6.12□□□□□ -1.43
RNU6-240P-201ENST00000516098 PABPN1Q86U42 306 aaKnown RBP eCLIP6.12□□□□□ -1.43
RNU6-240P-201ENST00000516098 CD44P16070 742 aaKnown RBP6.07□□□□□ -1.44
RNU6-240P-201ENST00000516098 FARP1Q9Y4F1 1045 aaPredicted RBP6.05□□□□□ -1.44
RNU6-240P-201ENST00000516098 POTEIP0CG38 1075 aa6□□□□□ -1.45
RNU6-240P-201ENST00000516098 DCBLD2Q96PD2 775 aa6□□□□□ -1.45
RNU6-240P-201ENST00000516098 ZNF579Q8NAF0 562 aaKnown RBP5.99□□□□□ -1.45
RNU6-240P-201ENST00000516098 STAG3Q9UJ98 1225 aa5.99□□□□□ -1.45
RNU6-240P-201ENST00000516098 ZRANB1Q9UGI0 708 aa5.95□□□□□ -1.46
RNU6-240P-201ENST00000516098 CREBZFQ9NS37 354 aa5.93□□□□□ -1.46
RNU6-240P-201ENST00000516098 PAK3O75914 559 aaPredicted RBP5.92□□□□□ -1.46
RNU6-240P-201ENST00000516098 GALR2O43603 387 aaPredicted RBP5.88□□□□□ -1.47
RNU6-240P-201ENST00000516098 NPM1P06748 294 aaKnown RBP eCLIP5.88□□□□□ -1.47
RNU6-240P-201ENST00000516098 CSRNP3Q8WYN3 585 aa5.86□□□□□ -1.47
RNU6-240P-201ENST00000516098 PLSCR2Q9NRY7 297 aa5.86□□□□□ -1.47
RNU6-240P-201ENST00000516098 SPDYE4A6NLX3 237 aa5.85□□□□□ -1.47
RNU6-240P-201ENST00000516098 OTUD5Q96G74 571 aa5.83□□□□□ -1.48
RNU6-240P-201ENST00000516098 PHF12Q96QT6 1004 aa5.82□□□□□ -1.48
RNU6-240P-201ENST00000516098 MNX1P50219 401 aaPredicted RBP5.79□□□□□ -1.48
RNU6-240P-201ENST00000516098 SLC39A7Q92504 469 aa5.79□□□□□ -1.48
RNU6-240P-201ENST00000516098 POTEMA6NI47 508 aa5.78□□□□□ -1.48
RNU6-240P-201ENST00000516098 POTEB2H3BUK9 544 aa5.78□□□□□ -1.48
RNU6-240P-201ENST00000516098 ASTLQ6HA08 431 aaPredicted RBP5.78□□□□□ -1.48
RNU6-240P-201ENST00000516098 PCDH10Q9P2E7 1040 aa5.78□□□□□ -1.48
RNU6-240P-201ENST00000516098 C7P10643 843 aa5.77□□□□□ -1.49
RNU6-240P-201ENST00000516098 MAMSTRQ6ZN01 415 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms