Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.94□□□□□ -1.46
NUP98P52948 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NUP98P52948 ADAM24P-201ENST00000398655 2101 ntBASIC5.94□□□□□ -1.46
NUP98P52948 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
NUP98P52948 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.93□□□□□ -1.46
NUP98P52948 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NUP98P52948 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.93□□□□□ -1.46
NUP98P52948 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.93□□□□□ -1.46
NUP98P52948 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NUP98P52948 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.93□□□□□ -1.46
NUP98P52948 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.93□□□□□ -1.46
NUP98P52948 AP000580.1-201ENST00000404439 358 ntBASIC5.93□□□□□ -1.46
NUP98P52948 SNORA11-201ENST00000408789 128 ntBASIC5.93□□□□□ -1.46
NUP98P52948 NPM1P33-201ENST00000438918 872 ntBASIC5.93□□□□□ -1.46
NUP98P52948 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.93□□□□□ -1.46
NUP98P52948 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.93□□□□□ -1.46
NUP98P52948 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.93□□□□□ -1.46
NUP98P52948 AP000919.1-201ENST00000582850 985 ntBASIC5.93□□□□□ -1.46
NUP98P52948 AC068724.3-201ENST00000625906 87 ntBASIC5.93□□□□□ -1.46
NUP98P52948 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
NUP98P52948 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.93□□□□□ -1.46
NUP98P52948 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.93□□□□□ -1.46
NUP98P52948 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NUP98P52948 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NUP98P52948 AC025574.1-201ENST00000554784 1653 ntBASIC5.93□□□□□ -1.46
NUP98P52948 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NUP98P52948 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NUP98P52948 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC5.93□□□□□ -1.46
NUP98P52948 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
NUP98P52948 AC239868.2-201ENST00000564237 4527 ntBASIC5.93□□□□□ -1.46
NUP98P52948 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NUP98P52948 SNORA70.2-201ENST00000364506 135 ntBASIC5.92□□□□□ -1.46
NUP98P52948 RNA5SP479-201ENST00000364858 117 ntBASIC5.92□□□□□ -1.46
NUP98P52948 AC079809.1-201ENST00000415468 276 ntBASIC5.92□□□□□ -1.46
NUP98P52948 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.92□□□□□ -1.46
NUP98P52948 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.92□□□□□ -1.46
NUP98P52948 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.92□□□□□ -1.46
NUP98P52948 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.92□□□□□ -1.46
NUP98P52948 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.92□□□□□ -1.46
NUP98P52948 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.92□□□□□ -1.46
NUP98P52948 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.92□□□□□ -1.46
NUP98P52948 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.92□□□□□ -1.46
NUP98P52948 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.92□□□□□ -1.46
NUP98P52948 AC090181.2-201ENST00000602975 672 ntBASIC5.92□□□□□ -1.46
NUP98P52948 AC103792.1-201ENST00000603591 919 ntBASIC5.92□□□□□ -1.46
NUP98P52948 AC006338.2-201ENST00000616864 791 ntBASIC5.92□□□□□ -1.46
NUP98P52948 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.92□□□□□ -1.46
NUP98P52948 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
NUP98P52948 ADAM5-202ENST00000399789 1942 ntBASIC5.92□□□□□ -1.46
NUP98P52948 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
NUP98P52948 SNX18P3-202ENST00000565670 1750 ntBASIC5.92□□□□□ -1.46
NUP98P52948 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
NUP98P52948 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.92□□□□□ -1.46
NUP98P52948 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
NUP98P52948 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.92□□□□□ -1.46
NUP98P52948 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC5.92□□□□□ -1.46
NUP98P52948 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
NUP98P52948 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.92□□□□□ -1.46
NUP98P52948 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.92□□□□□ -1.46
NUP98P52948 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.92□□□□□ -1.46
NUP98P52948 RPL7AP28-201ENST00000464513 571 ntBASIC5.92□□□□□ -1.46
NUP98P52948 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.92□□□□□ -1.46
NUP98P52948 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.92□□□□□ -1.46
NUP98P52948 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.92□□□□□ -1.46
NUP98P52948 AL445423.1-201ENST00000609941 536 ntBASIC5.92□□□□□ -1.46
NUP98P52948 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.92□□□□□ -1.46
NUP98P52948 AL121890.3-201ENST00000618494 516 ntBASIC5.92□□□□□ -1.46
NUP98P52948 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
NUP98P52948 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
NUP98P52948 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
NUP98P52948 AL034370.1-201ENST00000397254 1590 ntBASIC5.92□□□□□ -1.46
NUP98P52948 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.92□□□□□ -1.46
NUP98P52948 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
NUP98P52948 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.91□□□□□ -1.46
NUP98P52948 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
NUP98P52948 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
NUP98P52948 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
NUP98P52948 OR14L1P-202ENST00000641545 3009 ntBASIC5.91□□□□□ -1.46
NUP98P52948 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
NUP98P52948 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
NUP98P52948 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.91□□□□□ -1.46
NUP98P52948 IGKV7-3-201ENST00000357453 298 ntBASIC5.91□□□□□ -1.46
NUP98P52948 RPS3AP54-201ENST00000435535 734 ntBASIC5.91□□□□□ -1.46
NUP98P52948 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.91□□□□□ -1.46
NUP98P52948 RN7SL558P-201ENST00000497468 299 ntBASIC5.91□□□□□ -1.46
NUP98P52948 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
NUP98P52948 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.91□□□□□ -1.46
NUP98P52948 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.91□□□□□ -1.46
NUP98P52948 AC069061.3-201ENST00000582254 823 ntBASIC5.91□□□□□ -1.46
NUP98P52948 AL356218.2-201ENST00000605264 187 ntBASIC5.91□□□□□ -1.46
NUP98P52948 AC006453.5-201ENST00000636451 619 ntBASIC5.91□□□□□ -1.46
NUP98P52948 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
NUP98P52948 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
NUP98P52948 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
NUP98P52948 AC092376.2-201ENST00000622621 4116 ntBASIC5.91□□□□□ -1.46
NUP98P52948 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
NUP98P52948 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC5.91□□□□□ -1.46
NUP98P52948 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
NUP98P52948 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
NUP98P52948 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms