RNA–Protein interactions for RNA: ENST00000560552.1

AC109630.1-202, humanhuman

TSL 4 BASIC

Gene AC109630.1, Length 579 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC109630.1-202ENST00000560552 AEBP2Q6ZN18 517 aaPredicted RBP21.73■■□□□ 1.07
AC109630.1-202ENST00000560552 CHIC1Q5VXU3 224 aa20.21■□□□□ 0.83
AC109630.1-202ENST00000560552 SENP3Q9H4L4 574 aaPredicted RBP18.65■□□□□ 0.58
AC109630.1-202ENST00000560552 POTEDQ86YR6 584 aa18.52■□□□□ 0.56
AC109630.1-202ENST00000560552 PHF23Q9BUL5 403 aaPredicted RBP18.27■□□□□ 0.52
AC109630.1-202ENST00000560552 FOXD1Q16676 465 aa17.58■□□□□ 0.4
AC109630.1-202ENST00000560552 MSH5O43196 834 aa16.85■□□□□ 0.29
AC109630.1-202ENST00000560552 PIAS4Q8N2W9 510 aaPredicted RBP16.14■□□□□ 0.17
AC109630.1-202ENST00000560552 PPP6R1Q9UPN7 881 aa15.55■□□□□ 0.08
AC109630.1-202ENST00000560552 ADRA2BP18089 450 aa15.43■□□□□ 0.06
AC109630.1-202ENST00000560552 CACNB1Q02641 598 aaPredicted RBP15.23■□□□□ 0.03
AC109630.1-202ENST00000560552 PLPPR3Q6T4P5 718 aa14.97□□□□□ -0.01
AC109630.1-202ENST00000560552 DMRT2Q9Y5R5 561 aa14.62□□□□□ -0.07
AC109630.1-202ENST00000560552 MAPK8IP2Q13387 824 aaPredicted RBP14.54□□□□□ -0.08
AC109630.1-202ENST00000560552 RNF39Q9H2S5 420 aa14.29□□□□□ -0.12
AC109630.1-202ENST00000560552 POTEHQ6S545 545 aa14.27□□□□□ -0.13
AC109630.1-202ENST00000560552 DCAF8L1A6NGE4 600 aa14.15□□□□□ -0.14
AC109630.1-202ENST00000560552 SCAF1Q9H7N4 1312 aaKnown RBP14.02□□□□□ -0.17
AC109630.1-202ENST00000560552 C1QBPQ07021 282 aaKnown RBP13.98□□□□□ -0.17
AC109630.1-202ENST00000560552 HOXD11P31277 338 aaPredicted RBP13.59□□□□□ -0.23
AC109630.1-202ENST00000560552 DNAJC5BQ9UF47 199 aa13.28□□□□□ -0.28
AC109630.1-202ENST00000560552 RNF216Q9NWF9 866 aaPredicted RBP13.17□□□□□ -0.3
AC109630.1-202ENST00000560552 PPP4R3CPQ6ZMV5 832 aa13□□□□□ -0.33
AC109630.1-202ENST00000560552 DSG3P32926 999 aa12.99□□□□□ -0.33
AC109630.1-202ENST00000560552 CNKSR2Q8WXI2 1034 aa12.99□□□□□ -0.33
AC109630.1-202ENST00000560552 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.99□□□□□ -0.33
AC109630.1-202ENST00000560552 CAPN15O75808 1086 aa12.82□□□□□ -0.36
AC109630.1-202ENST00000560552 SP7Q8TDD2 431 aaPredicted RBP12.81□□□□□ -0.36
AC109630.1-202ENST00000560552 SPINK5Q9NQ38 1064 aaPredicted RBP12.8□□□□□ -0.36
AC109630.1-202ENST00000560552 CHRDL2Q6WN34 429 aa12.63□□□□□ -0.39
AC109630.1-202ENST00000560552 U3KPZ7 1027 aaPredicted RBP12.59□□□□□ -0.39
AC109630.1-202ENST00000560552 ABCB7O75027 752 aa12.45□□□□□ -0.42
AC109630.1-202ENST00000560552 RBM42Q9BTD8 480 aaKnown RBP12.38□□□□□ -0.43
AC109630.1-202ENST00000560552 TRHP20396 242 aaPredicted RBP12.33□□□□□ -0.44
AC109630.1-202ENST00000560552 PLSCR2Q9NRY7 297 aa12.3□□□□□ -0.44
AC109630.1-202ENST00000560552 HAX1O00165 279 aa12.2□□□□□ -0.46
AC109630.1-202ENST00000560552 ZNF219Q9P2Y4 722 aaPredicted RBP12.2□□□□□ -0.46
AC109630.1-202ENST00000560552 NCBP3Q53F19 620 aaKnown RBP12.13□□□□□ -0.47
AC109630.1-202ENST00000560552 PIP4P2Q8N4L2 257 aa12.1□□□□□ -0.47
AC109630.1-202ENST00000560552 APLP2Q06481 763 aa12.02□□□□□ -0.49
AC109630.1-202ENST00000560552 LHX8Q68G74 356 aa12□□□□□ -0.49
AC109630.1-202ENST00000560552 NPM3O75607 178 aaKnown RBP11.98□□□□□ -0.49
AC109630.1-202ENST00000560552 EVX2Q03828 476 aa11.98□□□□□ -0.49
AC109630.1-202ENST00000560552 KCNA4P22459 653 aa11.96□□□□□ -0.49
AC109630.1-202ENST00000560552 AKT1S1Q96B36 256 aa11.86□□□□□ -0.51
AC109630.1-202ENST00000560552 FXR2P51116 673 aaKnown RBP eCLIP11.79□□□□□ -0.52
AC109630.1-202ENST00000560552 REM2Q8IYK8 340 aaPredicted RBP11.79□□□□□ -0.52
AC109630.1-202ENST00000560552 SLC4A2P04920 1241 aa11.75□□□□□ -0.53
AC109630.1-202ENST00000560552 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.74□□□□□ -0.53
AC109630.1-202ENST00000560552 HNRNPUL2Q1KMD3 747 aaKnown RBP11.74□□□□□ -0.53
AC109630.1-202ENST00000560552 PITPNM1O00562 1244 aa11.7□□□□□ -0.54
AC109630.1-202ENST00000560552 POLA2Q14181 598 aa11.7□□□□□ -0.54
AC109630.1-202ENST00000560552 SAMD1Q6SPF0 538 aaPredicted RBP11.64□□□□□ -0.55
AC109630.1-202ENST00000560552 GABBR2O75899 941 aa11.61□□□□□ -0.55
AC109630.1-202ENST00000560552 C19orf67A6NJJ6 358 aa11.47□□□□□ -0.57
AC109630.1-202ENST00000560552 OSCARQ8IYS5 282 aa11.42□□□□□ -0.58
AC109630.1-202ENST00000560552 POTEMA6NI47 508 aa11.39□□□□□ -0.59
AC109630.1-202ENST00000560552 POTEIP0CG38 1075 aa11.38□□□□□ -0.59
AC109630.1-202ENST00000560552 PRKAR2AP13861 404 aaKnown RBP11.38□□□□□ -0.59
AC109630.1-202ENST00000560552 ZBTB12Q9Y330 459 aaPredicted RBP11.32□□□□□ -0.6
AC109630.1-202ENST00000560552 POTEGQ6S5H5 508 aa11.31□□□□□ -0.6
AC109630.1-202ENST00000560552 SLC4A1APQ9BWU0 796 aaKnown RBP11.31□□□□□ -0.6
AC109630.1-202ENST00000560552 OTUD5Q96G74 571 aa11.17□□□□□ -0.62
AC109630.1-202ENST00000560552 PCDH10Q9P2E7 1040 aa11.16□□□□□ -0.62
AC109630.1-202ENST00000560552 CLEC11AQ9Y240 323 aa11.1□□□□□ -0.63
AC109630.1-202ENST00000560552 MYCNP04198 464 aaPredicted RBP11.07□□□□□ -0.64
AC109630.1-202ENST00000560552 ZBTB22O15209 634 aa11.06□□□□□ -0.64
AC109630.1-202ENST00000560552 DCBLD2Q96PD2 775 aa11.04□□□□□ -0.64
AC109630.1-202ENST00000560552 CHADLQ6NUI6 762 aa11.03□□□□□ -0.64
AC109630.1-202ENST00000560552 SPDYE1Q8NFV5 336 aaPredicted RBP11□□□□□ -0.65
AC109630.1-202ENST00000560552 POTEB2H3BUK9 544 aa10.99□□□□□ -0.65
AC109630.1-202ENST00000560552 ATF5Q9Y2D1 282 aaPredicted RBP10.99□□□□□ -0.65
AC109630.1-202ENST00000560552 FOXD4L1Q9NU39 408 aa10.98□□□□□ -0.65
AC109630.1-202ENST00000560552 CD44P16070 742 aaKnown RBP10.94□□□□□ -0.66
AC109630.1-202ENST00000560552 NISCHQ9Y2I1 1504 aa10.9□□□□□ -0.66
AC109630.1-202ENST00000560552 EHMT2Q96KQ7 1210 aa10.9□□□□□ -0.66
AC109630.1-202ENST00000560552 CLCN6P51797 869 aa10.89□□□□□ -0.67
AC109630.1-202ENST00000560552 SPDYE2BA6NHP3 402 aa10.88□□□□□ -0.67
AC109630.1-202ENST00000560552 SPDYE6P0CI01 402 aa10.88□□□□□ -0.67
AC109630.1-202ENST00000560552 SPDYE2Q495Y8 402 aa10.88□□□□□ -0.67
AC109630.1-202ENST00000560552 CSRNP3Q8WYN3 585 aa10.86□□□□□ -0.67
AC109630.1-202ENST00000560552 LCE2DQ5TA82 110 aaPredicted RBP10.84□□□□□ -0.67
AC109630.1-202ENST00000560552 FAM163AQ96GL9 167 aaPredicted RBP10.74□□□□□ -0.69
AC109630.1-202ENST00000560552 GALR2O43603 387 aaPredicted RBP10.7□□□□□ -0.7
AC109630.1-202ENST00000560552 PRR29P0C7W0 189 aa10.7□□□□□ -0.7
AC109630.1-202ENST00000560552 ZNF579Q8NAF0 562 aaKnown RBP10.69□□□□□ -0.7
AC109630.1-202ENST00000560552 FARP1Q9Y4F1 1045 aaPredicted RBP10.69□□□□□ -0.7
AC109630.1-202ENST00000560552 POTEJP0CG39 1038 aa10.63□□□□□ -0.71
AC109630.1-202ENST00000560552 CDAN1Q8IWY9 1227 aa10.63□□□□□ -0.71
AC109630.1-202ENST00000560552 SSUH2Q9Y2M2 353 aa10.63□□□□□ -0.71
AC109630.1-202ENST00000560552 ZRANB1Q9UGI0 708 aa10.61□□□□□ -0.71
AC109630.1-202ENST00000560552 PELP1Q8IZL8 1130 aaKnown RBP10.6□□□□□ -0.71
AC109630.1-202ENST00000560552 ZNF692Q9BU19 519 aaPredicted RBP10.59□□□□□ -0.71
AC109630.1-202ENST00000560552 ATXN8OSP0DMR3 200 aa10.57□□□□□ -0.72
AC109630.1-202ENST00000560552 FBLN2P98095 1184 aa10.56□□□□□ -0.72
AC109630.1-202ENST00000560552 MAMSTRQ6ZN01 415 aa10.54□□□□□ -0.72
AC109630.1-202ENST00000560552 METRNQ9UJH8 293 aa10.52□□□□□ -0.73
AC109630.1-202ENST00000560552 MMRN1Q13201 1228 aa10.51□□□□□ -0.73
AC109630.1-202ENST00000560552 SCUBE2Q9NQ36 999 aa10.45□□□□□ -0.74
AC109630.1-202ENST00000560552 PABPN1Q86U42 306 aaKnown RBP eCLIP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms