RNA–Protein interactions for RNA: ENST00000403231.5

KIF3A-203, Transcript of kinesin family member 3A, humanhuman

TSL 2 BASIC

Gene KIF3A, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-203ENST00000403231 AEBP2Q6ZN18 517 aaPredicted RBP13.39□□□□□ -0.27
KIF3A-203ENST00000403231 CHIC1Q5VXU3 224 aa12.69□□□□□ -0.38
KIF3A-203ENST00000403231 SENP3Q9H4L4 574 aaPredicted RBP11.63□□□□□ -0.55
KIF3A-203ENST00000403231 PHF23Q9BUL5 403 aaPredicted RBP11.35□□□□□ -0.59
KIF3A-203ENST00000403231 FOXD1Q16676 465 aa10.75□□□□□ -0.69
KIF3A-203ENST00000403231 NISCHQ9Y2I1 1504 aa10.59□□□□□ -0.71
KIF3A-203ENST00000403231 POTEDQ86YR6 584 aa10.3□□□□□ -0.76
KIF3A-203ENST00000403231 MSH5O43196 834 aa10.29□□□□□ -0.76
KIF3A-203ENST00000403231 PLPPR3Q6T4P5 718 aa10.01□□□□□ -0.81
KIF3A-203ENST00000403231 PIAS4Q8N2W9 510 aaPredicted RBP9.98□□□□□ -0.81
KIF3A-203ENST00000403231 PPP6R1Q9UPN7 881 aa9.79□□□□□ -0.84
KIF3A-203ENST00000403231 ADRA2BP18089 450 aa9.75□□□□□ -0.85
KIF3A-203ENST00000403231 DMRT2Q9Y5R5 561 aa9.17□□□□□ -0.94
KIF3A-203ENST00000403231 SCAF1Q9H7N4 1312 aaKnown RBP9.15□□□□□ -0.94
KIF3A-203ENST00000403231 CCDC180Q9P1Z9 1646 aa9.12□□□□□ -0.95
KIF3A-203ENST00000403231 MAPK8IP2Q13387 824 aaPredicted RBP8.99□□□□□ -0.97
KIF3A-203ENST00000403231 DCAF8L2P0C7V8 631 aa8.97□□□□□ -0.97
KIF3A-203ENST00000403231 SHROOM4Q9ULL8 1493 aa8.9□□□□□ -0.98
KIF3A-203ENST00000403231 ZCCHC6Q5VYS8 1495 aaKnown RBP8.87□□□□□ -0.99
KIF3A-203ENST00000403231 CACNB1Q02641 598 aaPredicted RBP8.86□□□□□ -0.99
KIF3A-203ENST00000403231 ABCC9O60706 1549 aa8.78□□□□□ -1
KIF3A-203ENST00000403231 HOXD11P31277 338 aaPredicted RBP8.78□□□□□ -1
KIF3A-203ENST00000403231 PPP4R3CPQ6ZMV5 832 aa8.7□□□□□ -1.02
KIF3A-203ENST00000403231 RNF39Q9H2S5 420 aa8.69□□□□□ -1.02
KIF3A-203ENST00000403231 DNAJC5BQ9UF47 199 aa8.69□□□□□ -1.02
KIF3A-203ENST00000403231 CNKSR2Q8WXI2 1034 aa8.65□□□□□ -1.02
KIF3A-203ENST00000403231 RNF216Q9NWF9 866 aaPredicted RBP8.64□□□□□ -1.03
KIF3A-203ENST00000403231 DCAF8L1A6NGE4 600 aa8.63□□□□□ -1.03
KIF3A-203ENST00000403231 DCAF1Q9Y4B6 1507 aa8.63□□□□□ -1.03
KIF3A-203ENST00000403231 C1QBPQ07021 282 aaKnown RBP8.62□□□□□ -1.03
KIF3A-203ENST00000403231 SUPT5HO00267 1087 aaKnown RBP8.59□□□□□ -1.03
KIF3A-203ENST00000403231 SCRIBQ14160 1630 aa8.56□□□□□ -1.04
KIF3A-203ENST00000403231 NACADO15069 1562 aa8.48□□□□□ -1.05
KIF3A-203ENST00000403231 MYO15BQ96JP2 1530 aa8.46□□□□□ -1.05
KIF3A-203ENST00000403231 RB1CC1Q8TDY2 1594 aa8.43□□□□□ -1.06
KIF3A-203ENST00000403231 UNC13AQ9UPW8 1703 aa8.42□□□□□ -1.06
KIF3A-203ENST00000403231 NCBP3Q53F19 620 aaKnown RBP8.4□□□□□ -1.06
KIF3A-203ENST00000403231 PABPN1Q86U42 306 aaKnown RBP eCLIP8.36□□□□□ -1.07
KIF3A-203ENST00000403231 CECR2Q9BXF3 1484 aa8.34□□□□□ -1.08
KIF3A-203ENST00000403231 RSF1Q96T23 1441 aaPredicted RBP8.27□□□□□ -1.09
KIF3A-203ENST00000403231 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.27□□□□□ -1.09
KIF3A-203ENST00000403231 BICRAQ9NZM4 1560 aa8.26□□□□□ -1.09
KIF3A-203ENST00000403231 MROH2BQ7Z745 1585 aa8.25□□□□□ -1.09
KIF3A-203ENST00000403231 WIZO95785 1651 aa8.23□□□□□ -1.09
KIF3A-203ENST00000403231 NPM3O75607 178 aaKnown RBP8.14□□□□□ -1.11
KIF3A-203ENST00000403231 SMARCA4P51532 1647 aa8.14□□□□□ -1.11
KIF3A-203ENST00000403231 BAZ1AQ9NRL2 1556 aaPredicted RBP8.13□□□□□ -1.11
KIF3A-203ENST00000403231 U3KPZ7 1027 aaPredicted RBP8.05□□□□□ -1.12
KIF3A-203ENST00000403231 APLP2Q06481 763 aa8.04□□□□□ -1.12
KIF3A-203ENST00000403231 POTEHQ6S545 545 aa8.04□□□□□ -1.12
KIF3A-203ENST00000403231 DSG3P32926 999 aa8.03□□□□□ -1.12
KIF3A-203ENST00000403231 CCDC88BA6NC98 1476 aa8.01□□□□□ -1.13
KIF3A-203ENST00000403231 TOP2AP11388 1531 aaKnown RBP8.01□□□□□ -1.13
KIF3A-203ENST00000403231 SMARCA2P51531 1590 aa7.99□□□□□ -1.13
KIF3A-203ENST00000403231 LOC105371045A0A1W2PR82 267 aa7.99□□□□□ -1.13
KIF3A-203ENST00000403231 ATAD2BQ9ULI0 1458 aa7.99□□□□□ -1.13
KIF3A-203ENST00000403231 EIF4G1Q04637 1599 aaKnown RBP7.98□□□□□ -1.13
KIF3A-203ENST00000403231 CAPN15O75808 1086 aa7.97□□□□□ -1.13
KIF3A-203ENST00000403231 TRIM41Q8WV44 630 aa7.97□□□□□ -1.13
KIF3A-203ENST00000403231 FAM9AQ8IZU1 332 aaPredicted RBP7.97□□□□□ -1.13
KIF3A-203ENST00000403231 EHMT2Q96KQ7 1210 aa7.96□□□□□ -1.14
KIF3A-203ENST00000403231 PEG3Q9GZU2 1588 aa7.95□□□□□ -1.14
KIF3A-203ENST00000403231 BAZ1BQ9UIG0 1483 aaKnown RBP7.94□□□□□ -1.14
KIF3A-203ENST00000403231 ABCC8Q09428 1581 aa7.93□□□□□ -1.14
KIF3A-203ENST00000403231 SPINK5Q9NQ38 1064 aaPredicted RBP7.93□□□□□ -1.14
KIF3A-203ENST00000403231 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.9□□□□□ -1.14
KIF3A-203ENST00000403231 HNRNPUL2Q1KMD3 747 aaKnown RBP7.9□□□□□ -1.14
KIF3A-203ENST00000403231 ZNF219Q9P2Y4 722 aaPredicted RBP7.89□□□□□ -1.15
KIF3A-203ENST00000403231 CC2D2AQ9P2K1 1620 aa7.89□□□□□ -1.15
KIF3A-203ENST00000403231 NCAPD3P42695 1498 aa7.86□□□□□ -1.15
KIF3A-203ENST00000403231 KCNA4P22459 653 aa7.83□□□□□ -1.16
KIF3A-203ENST00000403231 HMGXB3Q12766 1538 aa7.82□□□□□ -1.16
KIF3A-203ENST00000403231 SLC4A2P04920 1241 aa7.81□□□□□ -1.16
KIF3A-203ENST00000403231 SAMD1Q6SPF0 538 aaPredicted RBP7.81□□□□□ -1.16
KIF3A-203ENST00000403231 RUSC2Q8N2Y8 1516 aa7.8□□□□□ -1.16
KIF3A-203ENST00000403231 RBM42Q9BTD8 480 aaKnown RBP7.8□□□□□ -1.16
KIF3A-203ENST00000403231 SOGA1O94964 1423 aa7.78□□□□□ -1.16
KIF3A-203ENST00000403231 SYNJ1O43426 1573 aa7.78□□□□□ -1.16
KIF3A-203ENST00000403231 WRNQ14191 1432 aaPredicted RBP eCLIP7.76□□□□□ -1.17
KIF3A-203ENST00000403231 TRHP20396 242 aaPredicted RBP7.76□□□□□ -1.17
KIF3A-203ENST00000403231 NESP48681 1621 aa7.75□□□□□ -1.17
KIF3A-203ENST00000403231 CFTRP13569 1480 aa7.72□□□□□ -1.17
KIF3A-203ENST00000403231 ABCB7O75027 752 aa7.7□□□□□ -1.18
KIF3A-203ENST00000403231 CADPSQ9ULU8 1353 aa7.7□□□□□ -1.18
KIF3A-203ENST00000403231 PRDM2Q13029 1718 aa7.7□□□□□ -1.18
KIF3A-203ENST00000403231 CUX1P39880 1505 aa7.69□□□□□ -1.18
KIF3A-203ENST00000403231 CSRNP3Q8WYN3 585 aa7.69□□□□□ -1.18
KIF3A-203ENST00000403231 PPARGC1BQ86YN6 1023 aaKnown RBP7.68□□□□□ -1.18
KIF3A-203ENST00000403231 TOP2BQ02880 1626 aa7.68□□□□□ -1.18
KIF3A-203ENST00000403231 BIVM-ERCC5R4GMW8 1640 aa7.66□□□□□ -1.18
KIF3A-203ENST00000403231 RANGAP1P46060 587 aaPredicted RBP7.66□□□□□ -1.18
KIF3A-203ENST00000403231 UBTFP17480 764 aaKnown RBP7.65□□□□□ -1.18
KIF3A-203ENST00000403231 PCGF6Q9BYE7 350 aa7.64□□□□□ -1.19
KIF3A-203ENST00000403231 FANCD2Q9BXW9 1451 aa7.64□□□□□ -1.19
KIF3A-203ENST00000403231 MYCNP04198 464 aaPredicted RBP7.63□□□□□ -1.19
KIF3A-203ENST00000403231 KIF21AQ7Z4S6 1674 aa7.62□□□□□ -1.19
KIF3A-203ENST00000403231 TTBK1Q5TCY1 1321 aaPredicted RBP7.6□□□□□ -1.19
KIF3A-203ENST00000403231 FGD5Q6ZNL6 1462 aa7.59□□□□□ -1.19
KIF3A-203ENST00000403231 RAD54L2Q9Y4B4 1467 aa7.59□□□□□ -1.19
KIF3A-203ENST00000403231 RAPGEF2Q9Y4G8 1499 aa7.59□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms