RNA–Protein interactions for RNA: ENST00000392429.1

TMEM200A-202, Transcript of transmembrane protein 200A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM200A, Length 5,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM200A-202ENST00000392429 DCAF8L2P0C7V8 631 aa10.98□□□□□ -0.65
TMEM200A-202ENST00000392429 NISCHQ9Y2I1 1504 aa10.68□□□□□ -0.7
TMEM200A-202ENST00000392429 FAM9AQ8IZU1 332 aaPredicted RBP10.32□□□□□ -0.76
TMEM200A-202ENST00000392429 SUPT5HO00267 1087 aaKnown RBP10.18□□□□□ -0.78
TMEM200A-202ENST00000392429 APLP2Q06481 763 aa10.08□□□□□ -0.8
TMEM200A-202ENST00000392429 SHROOM4Q9ULL8 1493 aa9.98□□□□□ -0.81
TMEM200A-202ENST00000392429 PELP1Q8IZL8 1130 aaKnown RBP9.92□□□□□ -0.82
TMEM200A-202ENST00000392429 EHMT2Q96KQ7 1210 aa9.64□□□□□ -0.87
TMEM200A-202ENST00000392429 TRIM41Q8WV44 630 aa9.62□□□□□ -0.87
TMEM200A-202ENST00000392429 ATP1B4Q9UN42 357 aaPredicted RBP9.56□□□□□ -0.88
TMEM200A-202ENST00000392429 ZEB1P37275 1124 aaPredicted RBP9.56□□□□□ -0.88
TMEM200A-202ENST00000392429 UBTFP17480 764 aaKnown RBP9.54□□□□□ -0.88
TMEM200A-202ENST00000392429 CCER1Q8TC90 406 aaPredicted RBP9.48□□□□□ -0.89
TMEM200A-202ENST00000392429 RANGAP1P46060 587 aaPredicted RBP9.43□□□□□ -0.9
TMEM200A-202ENST00000392429 MYT1LQ9UL68 1186 aa9.4□□□□□ -0.9
TMEM200A-202ENST00000392429 CENPBP07199 599 aaPredicted RBP9.38□□□□□ -0.91
TMEM200A-202ENST00000392429 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.36□□□□□ -0.91
TMEM200A-202ENST00000392429 HNRNPUL2Q1KMD3 747 aaKnown RBP9.36□□□□□ -0.91
TMEM200A-202ENST00000392429 PCGF6Q9BYE7 350 aa9.33□□□□□ -0.92
TMEM200A-202ENST00000392429 TTBK1Q5TCY1 1321 aaPredicted RBP9.33□□□□□ -0.92
TMEM200A-202ENST00000392429 NEFLP07196 543 aa9.29□□□□□ -0.92
TMEM200A-202ENST00000392429 ERICH6Q7L0X2 663 aa9.28□□□□□ -0.92
TMEM200A-202ENST00000392429 ABCC9O60706 1549 aa9.27□□□□□ -0.92
TMEM200A-202ENST00000392429 TRIM26Q12899 539 aaPredicted RBP9.12□□□□□ -0.95
TMEM200A-202ENST00000392429 PABPN1Q86U42 306 aaKnown RBP eCLIP9.12□□□□□ -0.95
TMEM200A-202ENST00000392429 ITGAEP38570 1179 aa9.05□□□□□ -0.96
TMEM200A-202ENST00000392429 DAXXQ9UER7 740 aaPredicted RBP9.05□□□□□ -0.96
TMEM200A-202ENST00000392429 CDK11AQ9UQ88 783 aaPredicted RBP9.04□□□□□ -0.96
TMEM200A-202ENST00000392429 POLR3GLQ9BT43 218 aa9.03□□□□□ -0.96
TMEM200A-202ENST00000392429 SLC4A1APQ9BWU0 796 aaKnown RBP9.01□□□□□ -0.97
TMEM200A-202ENST00000392429 FBLN2P98095 1184 aa9.01□□□□□ -0.97
TMEM200A-202ENST00000392429 NPM1P06748 294 aaKnown RBP eCLIP9□□□□□ -0.97
TMEM200A-202ENST00000392429 ESF1Q9H501 851 aaKnown RBP8.99□□□□□ -0.97
TMEM200A-202ENST00000392429 TRIM52Q96A61 297 aa8.98□□□□□ -0.97
TMEM200A-202ENST00000392429 FAM50AQ14320 339 aaKnown RBP8.98□□□□□ -0.97
TMEM200A-202ENST00000392429 CHIC1Q5VXU3 224 aa8.98□□□□□ -0.97
TMEM200A-202ENST00000392429 CCDC180Q9P1Z9 1646 aa8.97□□□□□ -0.97
TMEM200A-202ENST00000392429 NEFMP07197 916 aa8.94□□□□□ -0.98
TMEM200A-202ENST00000392429 RB1CC1Q8TDY2 1594 aa8.91□□□□□ -0.98
TMEM200A-202ENST00000392429 ZBTB47Q9UFB7 747 aaPredicted RBP8.9□□□□□ -0.98
TMEM200A-202ENST00000392429 YTHDC1Q96MU7 727 aaKnown RBP8.9□□□□□ -0.99
TMEM200A-202ENST00000392429 MYT1Q01538 1121 aa8.89□□□□□ -0.99
TMEM200A-202ENST00000392429 SCRIBQ14160 1630 aa8.89□□□□□ -0.99
TMEM200A-202ENST00000392429 PPARGC1BQ86YN6 1023 aaKnown RBP8.88□□□□□ -0.99
TMEM200A-202ENST00000392429 BCANQ96GW7 911 aa8.88□□□□□ -0.99
TMEM200A-202ENST00000392429 ACIN1Q9UKV3 1341 aaKnown RBP8.88□□□□□ -0.99
TMEM200A-202ENST00000392429 CSRNP3Q8WYN3 585 aa8.85□□□□□ -0.99
TMEM200A-202ENST00000392429 CLSPNQ9HAW4 1339 aa8.83□□□□□ -1
TMEM200A-202ENST00000392429 ZCCHC6Q5VYS8 1495 aaKnown RBP8.81□□□□□ -1
TMEM200A-202ENST00000392429 STAG3Q9UJ98 1225 aa8.81□□□□□ -1
TMEM200A-202ENST00000392429 NACADO15069 1562 aa8.8□□□□□ -1
TMEM200A-202ENST00000392429 LOC105371045A0A1W2PR82 267 aa8.79□□□□□ -1
TMEM200A-202ENST00000392429 ZNF316A6NFI3 1004 aaPredicted RBP8.79□□□□□ -1
TMEM200A-202ENST00000392429 HRCP23327 699 aa8.78□□□□□ -1
TMEM200A-202ENST00000392429 ANP32CO43423 234 aa8.78□□□□□ -1
TMEM200A-202ENST00000392429 ZNF777Q9ULD5 760 aaPredicted RBP8.75□□□□□ -1.01
TMEM200A-202ENST00000392429 ZNF326Q5BKZ1 582 aaKnown RBP8.75□□□□□ -1.01
TMEM200A-202ENST00000392429 CHMP7Q8WUX9 453 aaPredicted RBP8.75□□□□□ -1.01
TMEM200A-202ENST00000392429 NEUROD1Q13562 356 aa8.74□□□□□ -1.01
TMEM200A-202ENST00000392429 TSPY4P0CV99 314 aa8.72□□□□□ -1.01
TMEM200A-202ENST00000392429 TSPY10P0CW01 314 aa8.72□□□□□ -1.01
TMEM200A-202ENST00000392429 CANXP27824 592 aaKnown RBP8.72□□□□□ -1.01
TMEM200A-202ENST00000392429 CNGB1Q14028 1251 aaPredicted RBP8.72□□□□□ -1.01
TMEM200A-202ENST00000392429 EEA1Q15075 1411 aa8.7□□□□□ -1.02
TMEM200A-202ENST00000392429 P3H3Q8IVL6 736 aa8.7□□□□□ -1.02
TMEM200A-202ENST00000392429 SLC24A1O60721 1099 aa8.69□□□□□ -1.02
TMEM200A-202ENST00000392429 RTL5Q5HYW3 569 aaPredicted RBP8.69□□□□□ -1.02
TMEM200A-202ENST00000392429 RSF1Q96T23 1441 aaPredicted RBP8.68□□□□□ -1.02
TMEM200A-202ENST00000392429 CHGAP10645 457 aaKnown RBP8.67□□□□□ -1.02
TMEM200A-202ENST00000392429 DIEXFQ68CQ4 756 aaKnown RBP8.66□□□□□ -1.02
TMEM200A-202ENST00000392429 TONSLQ96HA7 1378 aa8.65□□□□□ -1.02
TMEM200A-202ENST00000392429 MTUS2Q5JR59 1369 aa8.64□□□□□ -1.03
TMEM200A-202ENST00000392429 ERCC6Q03468 1493 aa8.64□□□□□ -1.03
TMEM200A-202ENST00000392429 BAZ1BQ9UIG0 1483 aaKnown RBP8.64□□□□□ -1.03
TMEM200A-202ENST00000392429 PLEKHD1A6NEE1 506 aa8.63□□□□□ -1.03
TMEM200A-202ENST00000392429 ARID3CA6NKF2 412 aa8.63□□□□□ -1.03
TMEM200A-202ENST00000392429 NPM2Q86SE8 214 aaKnown RBP8.59□□□□□ -1.03
TMEM200A-202ENST00000392429 PPP1R15AO75807 674 aaPredicted RBP8.58□□□□□ -1.04
TMEM200A-202ENST00000392429 KIF27Q86VH2 1401 aa8.57□□□□□ -1.04
TMEM200A-202ENST00000392429 DCAF1Q9Y4B6 1507 aa8.57□□□□□ -1.04
TMEM200A-202ENST00000392429 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.56□□□□□ -1.04
TMEM200A-202ENST00000392429 CDCA8Q53HL2 280 aa8.56□□□□□ -1.04
TMEM200A-202ENST00000392429 BAZ1AQ9NRL2 1556 aaPredicted RBP8.55□□□□□ -1.04
TMEM200A-202ENST00000392429 HDGFP51858 240 aaKnown RBP8.55□□□□□ -1.04
TMEM200A-202ENST00000392429 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.54□□□□□ -1.04
TMEM200A-202ENST00000392429 GOLGA3Q08378 1498 aa8.53□□□□□ -1.04
TMEM200A-202ENST00000392429 PLPPR3Q6T4P5 718 aa8.52□□□□□ -1.05
TMEM200A-202ENST00000392429 CLIP1P30622 1438 aa8.52□□□□□ -1.05
TMEM200A-202ENST00000392429 ARID4BQ4LE39 1312 aaPredicted RBP8.52□□□□□ -1.05
TMEM200A-202ENST00000392429 UPF2Q9HAU5 1272 aaKnown RBP8.52□□□□□ -1.05
TMEM200A-202ENST00000392429 C14orf37Q86TY3 774 aa8.52□□□□□ -1.05
TMEM200A-202ENST00000392429 WRNQ14191 1432 aaPredicted RBP eCLIP8.51□□□□□ -1.05
TMEM200A-202ENST00000392429 EIF5BO60841 1220 aaKnown RBP8.51□□□□□ -1.05
TMEM200A-202ENST00000392429 WDR43Q15061 677 aaKnown RBP eCLIP8.51□□□□□ -1.05
TMEM200A-202ENST00000392429 PDS5BQ9NTI5 1447 aa8.5□□□□□ -1.05
TMEM200A-202ENST00000392429 HAP1P54257 671 aaPredicted RBP8.49□□□□□ -1.05
TMEM200A-202ENST00000392429 KANK1Q14678 1352 aa8.48□□□□□ -1.05
TMEM200A-202ENST00000392429 CFAP53Q96M91 514 aa8.48□□□□□ -1.05
TMEM200A-202ENST00000392429 CEP164Q9UPV0 1460 aa8.48□□□□□ -1.05
TMEM200A-202ENST00000392429 SCAF1Q9H7N4 1312 aaKnown RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms