RNA–Protein interactions for RNA: ENST00000559643.1

AC022523.3-201, humanhuman

TSL 3 BASIC

Gene AC022523.3, Length 410 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC022523.3-201ENST00000559643 AEBP2Q6ZN18 517 aaPredicted RBP27.58■■■□□ 2.01
AC022523.3-201ENST00000559643 CHIC1Q5VXU3 224 aa25.94■■□□□ 1.74
AC022523.3-201ENST00000559643 SENP3Q9H4L4 574 aaPredicted RBP23.51■■□□□ 1.35
AC022523.3-201ENST00000559643 PHF23Q9BUL5 403 aaPredicted RBP23.18■■□□□ 1.3
AC022523.3-201ENST00000559643 FOXD1Q16676 465 aa21.97■■□□□ 1.11
AC022523.3-201ENST00000559643 MSH5O43196 834 aa20.6■□□□□ 0.89
AC022523.3-201ENST00000559643 PLPPR3Q6T4P5 718 aa20.59■□□□□ 0.89
AC022523.3-201ENST00000559643 POTEDQ86YR6 584 aa20.52■□□□□ 0.88
AC022523.3-201ENST00000559643 PIAS4Q8N2W9 510 aaPredicted RBP20.43■□□□□ 0.86
AC022523.3-201ENST00000559643 PPP6R1Q9UPN7 881 aa20.39■□□□□ 0.85
AC022523.3-201ENST00000559643 ADRA2BP18089 450 aa20.29■□□□□ 0.84
AC022523.3-201ENST00000559643 MAPK8IP2Q13387 824 aaPredicted RBP18.71■□□□□ 0.59
AC022523.3-201ENST00000559643 DMRT2Q9Y5R5 561 aa18.63■□□□□ 0.57
AC022523.3-201ENST00000559643 SCAF1Q9H7N4 1312 aaKnown RBP18.5■□□□□ 0.55
AC022523.3-201ENST00000559643 PPP4R3CPQ6ZMV5 832 aa18.03■□□□□ 0.48
AC022523.3-201ENST00000559643 HOXD11P31277 338 aaPredicted RBP17.86■□□□□ 0.45
AC022523.3-201ENST00000559643 DCAF8L1A6NGE4 600 aa17.79■□□□□ 0.44
AC022523.3-201ENST00000559643 CACNB1Q02641 598 aaPredicted RBP17.79■□□□□ 0.44
AC022523.3-201ENST00000559643 CNKSR2Q8WXI2 1034 aa17.74■□□□□ 0.43
AC022523.3-201ENST00000559643 RNF216Q9NWF9 866 aaPredicted RBP17.65■□□□□ 0.42
AC022523.3-201ENST00000559643 RNF39Q9H2S5 420 aa17.6■□□□□ 0.41
AC022523.3-201ENST00000559643 C1QBPQ07021 282 aaKnown RBP17.3■□□□□ 0.36
AC022523.3-201ENST00000559643 DNAJC5BQ9UF47 199 aa17.3■□□□□ 0.36
AC022523.3-201ENST00000559643 NCBP3Q53F19 620 aaKnown RBP17.24■□□□□ 0.35
AC022523.3-201ENST00000559643 NPM3O75607 178 aaKnown RBP17.04■□□□□ 0.32
AC022523.3-201ENST00000559643 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.96■□□□□ 0.31
AC022523.3-201ENST00000559643 U3KPZ7 1027 aaPredicted RBP16.63■□□□□ 0.25
AC022523.3-201ENST00000559643 KCNA4P22459 653 aa16.52■□□□□ 0.24
AC022523.3-201ENST00000559643 SPINK5Q9NQ38 1064 aaPredicted RBP16.46■□□□□ 0.23
AC022523.3-201ENST00000559643 DSG3P32926 999 aa16.39■□□□□ 0.21
AC022523.3-201ENST00000559643 CAPN15O75808 1086 aa16.38■□□□□ 0.21
AC022523.3-201ENST00000559643 SLC4A2P04920 1241 aa16.37■□□□□ 0.21
AC022523.3-201ENST00000559643 TRHP20396 242 aaPredicted RBP16.07■□□□□ 0.16
AC022523.3-201ENST00000559643 APLP2Q06481 763 aa16.06■□□□□ 0.16
AC022523.3-201ENST00000559643 ZNF219Q9P2Y4 722 aaPredicted RBP16.04■□□□□ 0.16
AC022523.3-201ENST00000559643 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.02■□□□□ 0.16
AC022523.3-201ENST00000559643 HNRNPUL2Q1KMD3 747 aaKnown RBP16.02■□□□□ 0.16
AC022523.3-201ENST00000559643 POTEHQ6S545 545 aa16.01■□□□□ 0.15
AC022523.3-201ENST00000559643 ABCB7O75027 752 aa16■□□□□ 0.15
AC022523.3-201ENST00000559643 SAMD1Q6SPF0 538 aaPredicted RBP15.94■□□□□ 0.14
AC022523.3-201ENST00000559643 MYCNP04198 464 aaPredicted RBP15.74■□□□□ 0.11
AC022523.3-201ENST00000559643 POLA2Q14181 598 aa15.62■□□□□ 0.09
AC022523.3-201ENST00000559643 RBM42Q9BTD8 480 aaKnown RBP15.6■□□□□ 0.09
AC022523.3-201ENST00000559643 SLC4A1APQ9BWU0 796 aaKnown RBP15.52■□□□□ 0.08
AC022523.3-201ENST00000559643 FOXD4L1Q9NU39 408 aa15.46■□□□□ 0.07
AC022523.3-201ENST00000559643 ATF5Q9Y2D1 282 aaPredicted RBP15.44■□□□□ 0.06
AC022523.3-201ENST00000559643 CHRDL2Q6WN34 429 aa15.38■□□□□ 0.05
AC022523.3-201ENST00000559643 ZBTB12Q9Y330 459 aaPredicted RBP15.26■□□□□ 0.03
AC022523.3-201ENST00000559643 ZBTB22O15209 634 aa15.23■□□□□ 0.03
AC022523.3-201ENST00000559643 AKT1S1Q96B36 256 aa15.22■□□□□ 0.03
AC022523.3-201ENST00000559643 OSCARQ8IYS5 282 aa15.12■□□□□ 0.01
AC022523.3-201ENST00000559643 REM2Q8IYK8 340 aaPredicted RBP15.09■□□□□ 0.01
AC022523.3-201ENST00000559643 ATXN8OSP0DMR3 200 aa15.02■□□□□ -0
AC022523.3-201ENST00000559643 PIP4P2Q8N4L2 257 aa14.98□□□□□ -0.01
AC022523.3-201ENST00000559643 PITPNM1O00562 1244 aa14.94□□□□□ -0.02
AC022523.3-201ENST00000559643 SP7Q8TDD2 431 aaPredicted RBP14.9□□□□□ -0.02
AC022523.3-201ENST00000559643 FXR2P51116 673 aaKnown RBP eCLIP14.86□□□□□ -0.03
AC022523.3-201ENST00000559643 SPDYE2BA6NHP3 402 aa14.79□□□□□ -0.04
AC022523.3-201ENST00000559643 SPDYE6P0CI01 402 aa14.79□□□□□ -0.04
AC022523.3-201ENST00000559643 SPDYE2Q495Y8 402 aa14.79□□□□□ -0.04
AC022523.3-201ENST00000559643 FBLN2P98095 1184 aa14.78□□□□□ -0.04
AC022523.3-201ENST00000559643 MKRN4PQ13434 485 aaPredicted RBP14.73□□□□□ -0.05
AC022523.3-201ENST00000559643 HAX1O00165 279 aa14.72□□□□□ -0.05
AC022523.3-201ENST00000559643 EVX2Q03828 476 aa14.6□□□□□ -0.07
AC022523.3-201ENST00000559643 SSUH2Q9Y2M2 353 aa14.6□□□□□ -0.07
AC022523.3-201ENST00000559643 SPDYE1Q8NFV5 336 aaPredicted RBP14.57□□□□□ -0.08
AC022523.3-201ENST00000559643 ZNF692Q9BU19 519 aaPredicted RBP14.56□□□□□ -0.08
AC022523.3-201ENST00000559643 CLEC11AQ9Y240 323 aa14.53□□□□□ -0.08
AC022523.3-201ENST00000559643 PRKAR2AP13861 404 aaKnown RBP14.52□□□□□ -0.09
AC022523.3-201ENST00000559643 C19orf67A6NJJ6 358 aa14.39□□□□□ -0.11
AC022523.3-201ENST00000559643 PABPN1Q86U42 306 aaKnown RBP eCLIP14.35□□□□□ -0.11
AC022523.3-201ENST00000559643 CHADLQ6NUI6 762 aa14.31□□□□□ -0.12
AC022523.3-201ENST00000559643 CSRNP3Q8WYN3 585 aa14.3□□□□□ -0.12
AC022523.3-201ENST00000559643 PRR29P0C7W0 189 aa14.27□□□□□ -0.13
AC022523.3-201ENST00000559643 GABBR2O75899 941 aa14.22□□□□□ -0.13
AC022523.3-201ENST00000559643 FARP1Q9Y4F1 1045 aaPredicted RBP14.09□□□□□ -0.15
AC022523.3-201ENST00000559643 CD44P16070 742 aaKnown RBP14.04□□□□□ -0.16
AC022523.3-201ENST00000559643 LHX8Q68G74 356 aa13.97□□□□□ -0.17
AC022523.3-201ENST00000559643 POTEIP0CG38 1075 aa13.96□□□□□ -0.17
AC022523.3-201ENST00000559643 EHMT2Q96KQ7 1210 aa13.93□□□□□ -0.18
AC022523.3-201ENST00000559643 CREBZFQ9NS37 354 aa13.92□□□□□ -0.18
AC022523.3-201ENST00000559643 CLCN6P51797 869 aa13.89□□□□□ -0.19
AC022523.3-201ENST00000559643 STAG3Q9UJ98 1225 aa13.88□□□□□ -0.19
AC022523.3-201ENST00000559643 SPDYE4A6NLX3 237 aa13.87□□□□□ -0.19
AC022523.3-201ENST00000559643 ZNF579Q8NAF0 562 aaKnown RBP13.85□□□□□ -0.19
AC022523.3-201ENST00000559643 ZRANB1Q9UGI0 708 aa13.8□□□□□ -0.2
AC022523.3-201ENST00000559643 DCBLD2Q96PD2 775 aa13.74□□□□□ -0.21
AC022523.3-201ENST00000559643 GALR2O43603 387 aaPredicted RBP13.69□□□□□ -0.22
AC022523.3-201ENST00000559643 MNX1P50219 401 aaPredicted RBP13.69□□□□□ -0.22
AC022523.3-201ENST00000559643 PHF12Q96QT6 1004 aa13.62□□□□□ -0.23
AC022523.3-201ENST00000559643 PAK3O75914 559 aaPredicted RBP13.6□□□□□ -0.23
AC022523.3-201ENST00000559643 NPM1P06748 294 aaKnown RBP eCLIP13.59□□□□□ -0.23
AC022523.3-201ENST00000559643 PROM2Q8N271 834 aa13.57□□□□□ -0.24
AC022523.3-201ENST00000559643 POTEB2H3BUK9 544 aa13.49□□□□□ -0.25
AC022523.3-201ENST00000559643 PELP1Q8IZL8 1130 aaKnown RBP13.47□□□□□ -0.25
AC022523.3-201ENST00000559643 OTUD5Q96G74 571 aa13.47□□□□□ -0.25
AC022523.3-201ENST00000559643 MS4A3Q96HJ5 214 aa13.43□□□□□ -0.26
AC022523.3-201ENST00000559643 ASTLQ6HA08 431 aaPredicted RBP13.4□□□□□ -0.26
AC022523.3-201ENST00000559643 ATMINO43313 823 aaPredicted RBP13.36□□□□□ -0.27
AC022523.3-201ENST00000559643 TSPYL2Q9H2G4 693 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms