RNA–Protein interactions for RNA: ENST00000357453.2

IGKV7-3-201, Transcript of immunoglobulin kappa variable 7-3 (pseudogene), humanhuman

BASIC

Gene IGKV7-3, Length 298 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV7-3-201ENST00000357453 AEBP2Q6ZN18 517 aaPredicted RBP18.17■□□□□ 0.5
IGKV7-3-201ENST00000357453 CHIC1Q5VXU3 224 aa17.02■□□□□ 0.32
IGKV7-3-201ENST00000357453 SENP3Q9H4L4 574 aaPredicted RBP15.64■□□□□ 0.09
IGKV7-3-201ENST00000357453 PHF23Q9BUL5 403 aaPredicted RBP15.35■□□□□ 0.05
IGKV7-3-201ENST00000357453 FOXD1Q16676 465 aa14.62□□□□□ -0.07
IGKV7-3-201ENST00000357453 POTEDQ86YR6 584 aa14.61□□□□□ -0.07
IGKV7-3-201ENST00000357453 MSH5O43196 834 aa13.95□□□□□ -0.18
IGKV7-3-201ENST00000357453 PIAS4Q8N2W9 510 aaPredicted RBP13.52□□□□□ -0.25
IGKV7-3-201ENST00000357453 PLPPR3Q6T4P5 718 aa13.46□□□□□ -0.25
IGKV7-3-201ENST00000357453 PPP6R1Q9UPN7 881 aa13.21□□□□□ -0.29
IGKV7-3-201ENST00000357453 ADRA2BP18089 450 aa13.13□□□□□ -0.31
IGKV7-3-201ENST00000357453 EHMT2Q96KQ7 1210 aa12.57□□□□□ -0.4
IGKV7-3-201ENST00000357453 KCNA4P22459 653 aa12.51□□□□□ -0.41
IGKV7-3-201ENST00000357453 CACNB1Q02641 598 aaPredicted RBP12.34□□□□□ -0.43
IGKV7-3-201ENST00000357453 DMRT2Q9Y5R5 561 aa12.3□□□□□ -0.44
IGKV7-3-201ENST00000357453 MAPK8IP2Q13387 824 aaPredicted RBP12.24□□□□□ -0.45
IGKV7-3-201ENST00000357453 SCAF1Q9H7N4 1312 aaKnown RBP12.09□□□□□ -0.47
IGKV7-3-201ENST00000357453 CSRNP3Q8WYN3 585 aa12.08□□□□□ -0.48
IGKV7-3-201ENST00000357453 SLC4A1APQ9BWU0 796 aaKnown RBP12.06□□□□□ -0.48
IGKV7-3-201ENST00000357453 PPP4R3CPQ6ZMV5 832 aa11.94□□□□□ -0.5
IGKV7-3-201ENST00000357453 NCBP3Q53F19 620 aaKnown RBP11.87□□□□□ -0.51
IGKV7-3-201ENST00000357453 RNF39Q9H2S5 420 aa11.84□□□□□ -0.51
IGKV7-3-201ENST00000357453 DCAF8L1A6NGE4 600 aa11.81□□□□□ -0.52
IGKV7-3-201ENST00000357453 NPM3O75607 178 aaKnown RBP11.67□□□□□ -0.54
IGKV7-3-201ENST00000357453 C1QBPQ07021 282 aaKnown RBP11.66□□□□□ -0.54
IGKV7-3-201ENST00000357453 HOXD11P31277 338 aaPredicted RBP11.62□□□□□ -0.55
IGKV7-3-201ENST00000357453 ZBTB22O15209 634 aa11.51□□□□□ -0.57
IGKV7-3-201ENST00000357453 CNKSR2Q8WXI2 1034 aa11.45□□□□□ -0.58
IGKV7-3-201ENST00000357453 SLC24A1O60721 1099 aa11.39□□□□□ -0.59
IGKV7-3-201ENST00000357453 DNAJC5BQ9UF47 199 aa11.39□□□□□ -0.59
IGKV7-3-201ENST00000357453 RNF216Q9NWF9 866 aaPredicted RBP11.37□□□□□ -0.59
IGKV7-3-201ENST00000357453 POTEHQ6S545 545 aa11.35□□□□□ -0.59
IGKV7-3-201ENST00000357453 FOXD4L1Q9NU39 408 aa11.32□□□□□ -0.6
IGKV7-3-201ENST00000357453 NISCHQ9Y2I1 1504 aa11.31□□□□□ -0.6
IGKV7-3-201ENST00000357453 AMER1Q5JTC6 1135 aaPredicted RBP11.27□□□□□ -0.61
IGKV7-3-201ENST00000357453 RTN4Q9NQC3 1192 aaKnown RBP11.23□□□□□ -0.61
IGKV7-3-201ENST00000357453 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.07□□□□□ -0.64
IGKV7-3-201ENST00000357453 DSG3P32926 999 aa10.88□□□□□ -0.67
IGKV7-3-201ENST00000357453 FKBP8Q14318 412 aa10.88□□□□□ -0.67
IGKV7-3-201ENST00000357453 ATXN8OSP0DMR3 200 aa10.87□□□□□ -0.67
IGKV7-3-201ENST00000357453 SLC4A2P04920 1241 aa10.82□□□□□ -0.68
IGKV7-3-201ENST00000357453 CAPN15O75808 1086 aa10.79□□□□□ -0.68
IGKV7-3-201ENST00000357453 MYCNP04198 464 aaPredicted RBP10.79□□□□□ -0.68
IGKV7-3-201ENST00000357453 SPINK5Q9NQ38 1064 aaPredicted RBP10.75□□□□□ -0.69
IGKV7-3-201ENST00000357453 U3KPZ7 1027 aaPredicted RBP10.73□□□□□ -0.69
IGKV7-3-201ENST00000357453 ABCC9O60706 1549 aa10.54□□□□□ -0.72
IGKV7-3-201ENST00000357453 TRHP20396 242 aaPredicted RBP10.47□□□□□ -0.73
IGKV7-3-201ENST00000357453 ABCB7O75027 752 aa10.45□□□□□ -0.74
IGKV7-3-201ENST00000357453 ZNF219Q9P2Y4 722 aaPredicted RBP10.45□□□□□ -0.74
IGKV7-3-201ENST00000357453 APLP2Q06481 763 aa10.44□□□□□ -0.74
IGKV7-3-201ENST00000357453 RBM42Q9BTD8 480 aaKnown RBP10.42□□□□□ -0.74
IGKV7-3-201ENST00000357453 CHRDL2Q6WN34 429 aa10.41□□□□□ -0.74
IGKV7-3-201ENST00000357453 ATF5Q9Y2D1 282 aaPredicted RBP10.4□□□□□ -0.74
IGKV7-3-201ENST00000357453 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.36□□□□□ -0.75
IGKV7-3-201ENST00000357453 PLCB2Q00722 1185 aa10.36□□□□□ -0.75
IGKV7-3-201ENST00000357453 HNRNPUL2Q1KMD3 747 aaKnown RBP10.36□□□□□ -0.75
IGKV7-3-201ENST00000357453 SP7Q8TDD2 431 aaPredicted RBP10.36□□□□□ -0.75
IGKV7-3-201ENST00000357453 SAMD1Q6SPF0 538 aaPredicted RBP10.34□□□□□ -0.75
IGKV7-3-201ENST00000357453 FBXO3Q9UK99 471 aa10.32□□□□□ -0.76
IGKV7-3-201ENST00000357453 HAP1P54257 671 aaPredicted RBP10.2□□□□□ -0.78
IGKV7-3-201ENST00000357453 BCANQ96GW7 911 aa10.17□□□□□ -0.78
IGKV7-3-201ENST00000357453 SPDYE4A6NLX3 237 aa10.16□□□□□ -0.78
IGKV7-3-201ENST00000357453 CCDC180Q9P1Z9 1646 aa10.15□□□□□ -0.78
IGKV7-3-201ENST00000357453 VASPP50552 380 aaPredicted RBP10.13□□□□□ -0.79
IGKV7-3-201ENST00000357453 DCAF8L2P0C7V8 631 aa10.11□□□□□ -0.79
IGKV7-3-201ENST00000357453 PROM2Q8N271 834 aa10.11□□□□□ -0.79
IGKV7-3-201ENST00000357453 VSIG10Q8N0Z9 540 aa10.08□□□□□ -0.8
IGKV7-3-201ENST00000357453 POLA2Q14181 598 aa10.07□□□□□ -0.8
IGKV7-3-201ENST00000357453 AKT1S1Q96B36 256 aa10.05□□□□□ -0.8
IGKV7-3-201ENST00000357453 IFNLR1Q8IU57 520 aaPredicted RBP10.04□□□□□ -0.8
IGKV7-3-201ENST00000357453 TAOK2Q9UL54 1235 aa10.04□□□□□ -0.8
IGKV7-3-201ENST00000357453 HAX1O00165 279 aa10.03□□□□□ -0.8
IGKV7-3-201ENST00000357453 PRKCSHP14314 528 aaPredicted RBP10.03□□□□□ -0.8
IGKV7-3-201ENST00000357453 PIP4P2Q8N4L2 257 aa10.02□□□□□ -0.81
IGKV7-3-201ENST00000357453 MKRN4PQ13434 485 aaPredicted RBP10□□□□□ -0.81
IGKV7-3-201ENST00000357453 PKD2Q13563 968 aa10□□□□□ -0.81
IGKV7-3-201ENST00000357453 FBLN2P98095 1184 aa9.96□□□□□ -0.82
IGKV7-3-201ENST00000357453 REM2Q8IYK8 340 aaPredicted RBP9.94□□□□□ -0.82
IGKV7-3-201ENST00000357453 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.93□□□□□ -0.82
IGKV7-3-201ENST00000357453 BBXQ8WY36 941 aaPredicted RBP9.91□□□□□ -0.82
IGKV7-3-201ENST00000357453 FXR2P51116 673 aaKnown RBP eCLIP9.88□□□□□ -0.83
IGKV7-3-201ENST00000357453 TPRNQ4KMQ1 711 aa9.87□□□□□ -0.83
IGKV7-3-201ENST00000357453 KDM2AQ9Y2K7 1162 aa9.86□□□□□ -0.83
IGKV7-3-201ENST00000357453 PABPN1Q86U42 306 aaKnown RBP eCLIP9.84□□□□□ -0.83
IGKV7-3-201ENST00000357453 EVX2Q03828 476 aa9.83□□□□□ -0.84
IGKV7-3-201ENST00000357453 PAXIP1Q6ZW49 1069 aaPredicted RBP9.83□□□□□ -0.84
IGKV7-3-201ENST00000357453 ZBTB12Q9Y330 459 aaPredicted RBP9.83□□□□□ -0.84
IGKV7-3-201ENST00000357453 RB1CC1Q8TDY2 1594 aa9.83□□□□□ -0.84
IGKV7-3-201ENST00000357453 ECM2O94769 699 aaPredicted RBP9.82□□□□□ -0.84
IGKV7-3-201ENST00000357453 SPOCK2Q92563 424 aa9.82□□□□□ -0.84
IGKV7-3-201ENST00000357453 PITPNM1O00562 1244 aa9.81□□□□□ -0.84
IGKV7-3-201ENST00000357453 CFAP44Q96MT7 982 aa9.8□□□□□ -0.84
IGKV7-3-201ENST00000357453 KLHL34Q8N239 644 aa9.79□□□□□ -0.84
IGKV7-3-201ENST00000357453 NPM1P06748 294 aaKnown RBP eCLIP9.78□□□□□ -0.84
IGKV7-3-201ENST00000357453 SPRYD3Q8NCJ5 442 aa9.73□□□□□ -0.85
IGKV7-3-201ENST00000357453 OSCARQ8IYS5 282 aa9.72□□□□□ -0.85
IGKV7-3-201ENST00000357453 LHX8Q68G74 356 aa9.71□□□□□ -0.86
IGKV7-3-201ENST00000357453 RGL2O15211 777 aa9.68□□□□□ -0.86
IGKV7-3-201ENST00000357453 STAG3Q9UJ98 1225 aa9.68□□□□□ -0.86
IGKV7-3-201ENST00000357453 TSHZ2Q9NRE2 1034 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms