RNA–Protein interactions for RNA: ENST00000395451.8

SNX24-202, Transcript of sorting nexin 24, humanhuman

TSL 3 BASIC

Gene SNX24, Length 1,050 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX24-202ENST00000395451 AEBP2Q6ZN18 517 aaPredicted RBP26.68■■□□□ 1.86
SNX24-202ENST00000395451 CHIC1Q5VXU3 224 aa26.13■■□□□ 1.77
SNX24-202ENST00000395451 PHF23Q9BUL5 403 aaPredicted RBP22.99■■□□□ 1.27
SNX24-202ENST00000395451 SENP3Q9H4L4 574 aaPredicted RBP22.62■■□□□ 1.21
SNX24-202ENST00000395451 PLPPR3Q6T4P5 718 aa21.26■□□□□ 0.99
SNX24-202ENST00000395451 FOXD1Q16676 465 aa20.98■□□□□ 0.95
SNX24-202ENST00000395451 ADRA2BP18089 450 aa20.26■□□□□ 0.83
SNX24-202ENST00000395451 PPP6R1Q9UPN7 881 aa20.26■□□□□ 0.83
SNX24-202ENST00000395451 PIAS4Q8N2W9 510 aaPredicted RBP19.83■□□□□ 0.77
SNX24-202ENST00000395451 MSH5O43196 834 aa19.32■□□□□ 0.68
SNX24-202ENST00000395451 PPP4R3CPQ6ZMV5 832 aa18.75■□□□□ 0.59
SNX24-202ENST00000395451 SCAF1Q9H7N4 1312 aaKnown RBP18.5■□□□□ 0.55
SNX24-202ENST00000395451 KCNA4P22459 653 aa18.43■□□□□ 0.54
SNX24-202ENST00000395451 MAPK8IP2Q13387 824 aaPredicted RBP18.35■□□□□ 0.53
SNX24-202ENST00000395451 NCBP3Q53F19 620 aaKnown RBP18.28■□□□□ 0.52
SNX24-202ENST00000395451 CNKSR2Q8WXI2 1034 aa18.19■□□□□ 0.5
SNX24-202ENST00000395451 DMRT2Q9Y5R5 561 aa18.07■□□□□ 0.48
SNX24-202ENST00000395451 NPM3O75607 178 aaKnown RBP18.03■□□□□ 0.48
SNX24-202ENST00000395451 RNF216Q9NWF9 866 aaPredicted RBP17.81■□□□□ 0.44
SNX24-202ENST00000395451 HOXD11P31277 338 aaPredicted RBP17.71■□□□□ 0.43
SNX24-202ENST00000395451 SLC4A1APQ9BWU0 796 aaKnown RBP17.57■□□□□ 0.4
SNX24-202ENST00000395451 POTEDQ86YR6 584 aa17.44■□□□□ 0.38
SNX24-202ENST00000395451 DNAJC5BQ9UF47 199 aa17.43■□□□□ 0.38
SNX24-202ENST00000395451 DCAF8L1A6NGE4 600 aa17.33■□□□□ 0.36
SNX24-202ENST00000395451 EHMT2Q96KQ7 1210 aa17.21■□□□□ 0.35
SNX24-202ENST00000395451 SLC4A2P04920 1241 aa16.99■□□□□ 0.31
SNX24-202ENST00000395451 ZBTB22O15209 634 aa16.97■□□□□ 0.31
SNX24-202ENST00000395451 FOXD4L1Q9NU39 408 aa16.94■□□□□ 0.3
SNX24-202ENST00000395451 CSRNP3Q8WYN3 585 aa16.92■□□□□ 0.3
SNX24-202ENST00000395451 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.92■□□□□ 0.3
SNX24-202ENST00000395451 MYCNP04198 464 aaPredicted RBP16.66■□□□□ 0.26
SNX24-202ENST00000395451 U3KPZ7 1027 aaPredicted RBP16.65■□□□□ 0.26
SNX24-202ENST00000395451 RNF39Q9H2S5 420 aa16.56■□□□□ 0.24
SNX24-202ENST00000395451 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.45■□□□□ 0.22
SNX24-202ENST00000395451 HNRNPUL2Q1KMD3 747 aaKnown RBP16.45■□□□□ 0.22
SNX24-202ENST00000395451 SAMD1Q6SPF0 538 aaPredicted RBP16.4■□□□□ 0.22
SNX24-202ENST00000395451 C1QBPQ07021 282 aaKnown RBP16.36■□□□□ 0.21
SNX24-202ENST00000395451 ATXN8OSP0DMR3 200 aa16.3■□□□□ 0.2
SNX24-202ENST00000395451 APLP2Q06481 763 aa16.27■□□□□ 0.2
SNX24-202ENST00000395451 ATF5Q9Y2D1 282 aaPredicted RBP16.21■□□□□ 0.19
SNX24-202ENST00000395451 SPINK5Q9NQ38 1064 aaPredicted RBP16.17■□□□□ 0.18
SNX24-202ENST00000395451 CAPN15O75808 1086 aa16.11■□□□□ 0.17
SNX24-202ENST00000395451 CACNB1Q02641 598 aaPredicted RBP16.09■□□□□ 0.17
SNX24-202ENST00000395451 TRHP20396 242 aaPredicted RBP16.06■□□□□ 0.16
SNX24-202ENST00000395451 ZNF219Q9P2Y4 722 aaPredicted RBP16.04■□□□□ 0.16
SNX24-202ENST00000395451 ABCB7O75027 752 aa15.82■□□□□ 0.12
SNX24-202ENST00000395451 DSG3P32926 999 aa15.79■□□□□ 0.12
SNX24-202ENST00000395451 POLA2Q14181 598 aa15.79■□□□□ 0.12
SNX24-202ENST00000395451 ZBTB12Q9Y330 459 aaPredicted RBP15.54■□□□□ 0.08
SNX24-202ENST00000395451 FBLN2P98095 1184 aa15.53■□□□□ 0.08
SNX24-202ENST00000395451 MKRN4PQ13434 485 aaPredicted RBP15.51■□□□□ 0.07
SNX24-202ENST00000395451 FKBP8Q14318 412 aa15.32■□□□□ 0.04
SNX24-202ENST00000395451 OSCARQ8IYS5 282 aa15.28■□□□□ 0.04
SNX24-202ENST00000395451 SPDYE4A6NLX3 237 aa15.21■□□□□ 0.03
SNX24-202ENST00000395451 SPDYE2BA6NHP3 402 aa15.12■□□□□ 0.01
SNX24-202ENST00000395451 SPDYE6P0CI01 402 aa15.12■□□□□ 0.01
SNX24-202ENST00000395451 SPDYE2Q495Y8 402 aa15.12■□□□□ 0.01
SNX24-202ENST00000395451 ZNF692Q9BU19 519 aaPredicted RBP15.09■□□□□ 0.01
SNX24-202ENST00000395451 RBM42Q9BTD8 480 aaKnown RBP15.05■□□□□ -0
SNX24-202ENST00000395451 SSUH2Q9Y2M2 353 aa15.01□□□□□ -0.01
SNX24-202ENST00000395451 PROM2Q8N271 834 aa14.94□□□□□ -0.02
SNX24-202ENST00000395451 PABPN1Q86U42 306 aaKnown RBP eCLIP14.9□□□□□ -0.02
SNX24-202ENST00000395451 AKT1S1Q96B36 256 aa14.87□□□□□ -0.03
SNX24-202ENST00000395451 REM2Q8IYK8 340 aaPredicted RBP14.74□□□□□ -0.05
SNX24-202ENST00000395451 FBXO3Q9UK99 471 aa14.73□□□□□ -0.05
SNX24-202ENST00000395451 SPDYE1Q8NFV5 336 aaPredicted RBP14.66□□□□□ -0.06
SNX24-202ENST00000395451 STAG3Q9UJ98 1225 aa14.64□□□□□ -0.07
SNX24-202ENST00000395451 CLEC11AQ9Y240 323 aa14.61□□□□□ -0.07
SNX24-202ENST00000395451 PITPNM1O00562 1244 aa14.58□□□□□ -0.08
SNX24-202ENST00000395451 VASPP50552 380 aaPredicted RBP14.54□□□□□ -0.08
SNX24-202ENST00000395451 PRR29P0C7W0 189 aa14.47□□□□□ -0.09
SNX24-202ENST00000395451 MIER1Q8N108 512 aa14.41□□□□□ -0.1
SNX24-202ENST00000395451 PLCD3Q8N3E9 789 aa14.41□□□□□ -0.1
SNX24-202ENST00000395451 CHRDL2Q6WN34 429 aa14.39□□□□□ -0.11
SNX24-202ENST00000395451 PLEKHG5O94827 1062 aa14.33□□□□□ -0.12
SNX24-202ENST00000395451 IFNLR1Q8IU57 520 aaPredicted RBP14.33□□□□□ -0.12
SNX24-202ENST00000395451 CREBZFQ9NS37 354 aa14.31□□□□□ -0.12
SNX24-202ENST00000395451 KLHL34Q8N239 644 aa14.28□□□□□ -0.12
SNX24-202ENST00000395451 FXR2P51116 673 aaKnown RBP eCLIP14.26□□□□□ -0.13
SNX24-202ENST00000395451 CHADLQ6NUI6 762 aa14.25□□□□□ -0.13
SNX24-202ENST00000395451 PIP4P2Q8N4L2 257 aa14.23□□□□□ -0.13
SNX24-202ENST00000395451 ZBTB47Q9UFB7 747 aaPredicted RBP14.23□□□□□ -0.13
SNX24-202ENST00000395451 PRKAR2AP13861 404 aaKnown RBP14.22□□□□□ -0.13
SNX24-202ENST00000395451 MNX1P50219 401 aaPredicted RBP14.16□□□□□ -0.14
SNX24-202ENST00000395451 SPOCK2Q92563 424 aa14.15□□□□□ -0.14
SNX24-202ENST00000395451 AMER1Q5JTC6 1135 aaPredicted RBP14.1□□□□□ -0.15
SNX24-202ENST00000395451 FARP1Q9Y4F1 1045 aaPredicted RBP14.1□□□□□ -0.15
SNX24-202ENST00000395451 RTN4Q9NQC3 1192 aaKnown RBP14.08□□□□□ -0.16
SNX24-202ENST00000395451 NPM1P06748 294 aaKnown RBP eCLIP14.07□□□□□ -0.16
SNX24-202ENST00000395451 NUBP1P53384 320 aa14.02□□□□□ -0.17
SNX24-202ENST00000395451 RASEFQ8IZ41 740 aa13.96□□□□□ -0.17
SNX24-202ENST00000395451 CIZ1Q9ULV3 898 aaPredicted RBP13.94□□□□□ -0.18
SNX24-202ENST00000395451 FAM212AQ96EL1 285 aa13.93□□□□□ -0.18
SNX24-202ENST00000395451 DCAF8Q5TAQ9 597 aa13.9□□□□□ -0.18
SNX24-202ENST00000395451 PKD2Q13563 968 aa13.89□□□□□ -0.19
SNX24-202ENST00000395451 GSE1Q14687 1217 aa13.89□□□□□ -0.19
SNX24-202ENST00000395451 TSPYL2Q9H2G4 693 aaPredicted RBP13.87□□□□□ -0.19
SNX24-202ENST00000395451 POTEHQ6S545 545 aa13.84□□□□□ -0.19
SNX24-202ENST00000395451 PAK3O75914 559 aaPredicted RBP13.83□□□□□ -0.2
SNX24-202ENST00000395451 CD44P16070 742 aaKnown RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms