Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 IGBP1P4-201ENST00000503202 879 ntBASIC4.96□□□□□ -1.62
SHFQ7M4L6 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC4.96□□□□□ -1.62
SHFQ7M4L6 AC021106.1-201ENST00000509020 1058 ntBASIC4.96□□□□□ -1.62
SHFQ7M4L6 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC4.96□□□□□ -1.62
SHFQ7M4L6 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.96□□□□□ -1.62
SHFQ7M4L6 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.96□□□□□ -1.62
SHFQ7M4L6 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC4.96□□□□□ -1.62
SHFQ7M4L6 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC4.96□□□□□ -1.62
SHFQ7M4L6 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC4.96□□□□□ -1.62
SHFQ7M4L6 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC4.96□□□□□ -1.62
SHFQ7M4L6 AC079905.1-201ENST00000549280 475 ntBASIC4.96□□□□□ -1.62
SHFQ7M4L6 DUX4L52-201ENST00000549363 777 ntBASIC4.96□□□□□ -1.62
SHFQ7M4L6 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC4.96□□□□□ -1.62
SHFQ7M4L6 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.96□□□□□ -1.62
SHFQ7M4L6 MIR4472-2-201ENST00000582069 67 ntBASIC4.96□□□□□ -1.62
SHFQ7M4L6 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC4.96□□□□□ -1.62
SHFQ7M4L6 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC4.96□□□□□ -1.62
SHFQ7M4L6 AP002802.2-201ENST00000605877 235 ntBASIC4.96□□□□□ -1.62
SHFQ7M4L6 AC012557.1-201ENST00000607115 611 ntBASIC4.96□□□□□ -1.62
SHFQ7M4L6 OR8G7P-201ENST00000616658 848 ntBASIC4.96□□□□□ -1.62
SHFQ7M4L6 CYCSP41-201ENST00000616920 296 ntBASIC4.96□□□□□ -1.62
SHFQ7M4L6 AL078595.3-201ENST00000623815 1166 ntBASIC4.96□□□□□ -1.62
SHFQ7M4L6 AC068787.1-201ENST00000623908 691 ntBASIC4.96□□□□□ -1.62
SHFQ7M4L6 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC4.96□□□□□ -1.62
SHFQ7M4L6 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.96□□□□□ -1.62
SHFQ7M4L6 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SHFQ7M4L6 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SHFQ7M4L6 PCAT14-202ENST00000627127 3935 ntBASIC4.96□□□□□ -1.62
SHFQ7M4L6 OFD1P8Y-201ENST00000449148 1433 ntBASIC4.96□□□□□ -1.62
SHFQ7M4L6 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.96□□□□□ -1.62
SHFQ7M4L6 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
SHFQ7M4L6 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SHFQ7M4L6 AC007842.1-201ENST00000597336 2039 ntBASIC4.96□□□□□ -1.62
SHFQ7M4L6 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC4.96□□□□□ -1.62
SHFQ7M4L6 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
SHFQ7M4L6 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SHFQ7M4L6 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SHFQ7M4L6 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
SHFQ7M4L6 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SHFQ7M4L6 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.95□□□□□ -1.62
SHFQ7M4L6 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC4.95□□□□□ -1.62
SHFQ7M4L6 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SHFQ7M4L6 CASC19-248ENST00000641674 1356 ntBASIC4.95□□□□□ -1.62
SHFQ7M4L6 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.95□□□□□ -1.62
SHFQ7M4L6 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
SHFQ7M4L6 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SHFQ7M4L6 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.95□□□□□ -1.62
SHFQ7M4L6 FIG4-202ENST00000368941 791 ntTSL 3 BASIC4.95□□□□□ -1.62
SHFQ7M4L6 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
SHFQ7M4L6 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.95□□□□□ -1.62
SHFQ7M4L6 AP002784.2-201ENST00000397300 549 ntBASIC4.95□□□□□ -1.62
SHFQ7M4L6 OOSP1-201ENST00000398992 1270 ntBASIC4.95□□□□□ -1.62
SHFQ7M4L6 MIR1275-201ENST00000408770 80 ntBASIC4.95□□□□□ -1.62
SHFQ7M4L6 NPM1P40-201ENST00000412758 733 ntBASIC4.95□□□□□ -1.62
SHFQ7M4L6 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC4.95□□□□□ -1.62
SHFQ7M4L6 PTP4A1P1-201ENST00000420539 515 ntBASIC4.95□□□□□ -1.62
SHFQ7M4L6 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.95□□□□□ -1.62
SHFQ7M4L6 AC115285.1-201ENST00000424879 736 ntBASIC4.95□□□□□ -1.62
SHFQ7M4L6 DEFB130D-201ENST00000426866 237 ntBASIC4.95□□□□□ -1.62
SHFQ7M4L6 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC4.95□□□□□ -1.62
SHFQ7M4L6 NDUFS5P5-201ENST00000437256 321 ntBASIC4.95□□□□□ -1.62
SHFQ7M4L6 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SHFQ7M4L6 TPT1P3-201ENST00000492841 512 ntBASIC4.95□□□□□ -1.62
SHFQ7M4L6 NENFP3-201ENST00000503735 313 ntBASIC4.95□□□□□ -1.62
SHFQ7M4L6 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.95□□□□□ -1.62
SHFQ7M4L6 HMGN1P9-201ENST00000515212 298 ntBASIC4.95□□□□□ -1.62
SHFQ7M4L6 RNU6-1308P-201ENST00000516817 103 ntBASIC4.95□□□□□ -1.62
SHFQ7M4L6 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC4.95□□□□□ -1.62
SHFQ7M4L6 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
SHFQ7M4L6 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.95□□□□□ -1.62
SHFQ7M4L6 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.95□□□□□ -1.62
SHFQ7M4L6 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.95□□□□□ -1.62
SHFQ7M4L6 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC4.95□□□□□ -1.62
SHFQ7M4L6 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC4.95□□□□□ -1.62
SHFQ7M4L6 AGGF1P5-201ENST00000567900 919 ntBASIC4.95□□□□□ -1.62
SHFQ7M4L6 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SHFQ7M4L6 MIR4509-3-201ENST00000578671 94 ntBASIC4.95□□□□□ -1.62
SHFQ7M4L6 MIR4509-2-201ENST00000583920 94 ntBASIC4.95□□□□□ -1.62
SHFQ7M4L6 AP001160.4-201ENST00000596971 382 ntBASIC4.95□□□□□ -1.62
SHFQ7M4L6 AC063977.5-201ENST00000601044 974 ntBASIC4.95□□□□□ -1.62
SHFQ7M4L6 AP000769.2-201ENST00000602344 396 ntBASIC4.95□□□□□ -1.62
SHFQ7M4L6 AC112220.2-201ENST00000605513 533 ntBASIC4.95□□□□□ -1.62
SHFQ7M4L6 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SHFQ7M4L6 MIR4509-1-201ENST00000618224 94 ntBASIC4.95□□□□□ -1.62
SHFQ7M4L6 MIR6806-201ENST00000622141 64 ntBASIC4.95□□□□□ -1.62
SHFQ7M4L6 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC4.95□□□□□ -1.62
SHFQ7M4L6 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.95□□□□□ -1.62
SHFQ7M4L6 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC4.95□□□□□ -1.62
SHFQ7M4L6 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.95□□□□□ -1.62
SHFQ7M4L6 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
SHFQ7M4L6 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
SHFQ7M4L6 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
SHFQ7M4L6 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SHFQ7M4L6 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.95□□□□□ -1.62
SHFQ7M4L6 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SHFQ7M4L6 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SHFQ7M4L6 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.95□□□□□ -1.62
SHFQ7M4L6 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
SHFQ7M4L6 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.94□□□□□ -1.62
SHFQ7M4L6 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms