RNA–Protein interactions for RNA: ENST00000557540.6

ETFRF1-211, Transcript of electron transfer flavoprotein regulatory factor 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene ETFRF1, Length 1,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFRF1-211ENST00000557540 AEBP2Q6ZN18 517 aaPredicted RBP32.7■■■□□ 2.83
ETFRF1-211ENST00000557540 CHIC1Q5VXU3 224 aa31.43■■■□□ 2.62
ETFRF1-211ENST00000557540 SENP3Q9H4L4 574 aaPredicted RBP27.76■■■□□ 2.03
ETFRF1-211ENST00000557540 PHF23Q9BUL5 403 aaPredicted RBP27.62■■■□□ 2.01
ETFRF1-211ENST00000557540 FOXD1Q16676 465 aa25.86■■□□□ 1.73
ETFRF1-211ENST00000557540 PLPPR3Q6T4P5 718 aa25.28■■□□□ 1.64
ETFRF1-211ENST00000557540 PPP6R1Q9UPN7 881 aa24.54■■□□□ 1.52
ETFRF1-211ENST00000557540 ADRA2BP18089 450 aa24.47■■□□□ 1.51
ETFRF1-211ENST00000557540 PIAS4Q8N2W9 510 aaPredicted RBP24.24■■□□□ 1.47
ETFRF1-211ENST00000557540 MSH5O43196 834 aa24■■□□□ 1.43
ETFRF1-211ENST00000557540 POTEDQ86YR6 584 aa22.75■■□□□ 1.23
ETFRF1-211ENST00000557540 MAPK8IP2Q13387 824 aaPredicted RBP22.37■■□□□ 1.17
ETFRF1-211ENST00000557540 SCAF1Q9H7N4 1312 aaKnown RBP22.32■■□□□ 1.16
ETFRF1-211ENST00000557540 PPP4R3CPQ6ZMV5 832 aa22.23■■□□□ 1.15
ETFRF1-211ENST00000557540 DMRT2Q9Y5R5 561 aa22.1■■□□□ 1.13
ETFRF1-211ENST00000557540 CNKSR2Q8WXI2 1034 aa21.71■■□□□ 1.07
ETFRF1-211ENST00000557540 NCBP3Q53F19 620 aaKnown RBP21.47■■□□□ 1.03
ETFRF1-211ENST00000557540 HOXD11P31277 338 aaPredicted RBP21.46■■□□□ 1.03
ETFRF1-211ENST00000557540 RNF216Q9NWF9 866 aaPredicted RBP21.4■■□□□ 1.02
ETFRF1-211ENST00000557540 NPM3O75607 178 aaKnown RBP21.2■□□□□ 0.98
ETFRF1-211ENST00000557540 KCNA4P22459 653 aa21.18■□□□□ 0.98
ETFRF1-211ENST00000557540 DCAF8L1A6NGE4 600 aa21.15■□□□□ 0.98
ETFRF1-211ENST00000557540 DNAJC5BQ9UF47 199 aa20.65■□□□□ 0.9
ETFRF1-211ENST00000557540 RNF39Q9H2S5 420 aa20.55■□□□□ 0.88
ETFRF1-211ENST00000557540 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.43■□□□□ 0.86
ETFRF1-211ENST00000557540 CACNB1Q02641 598 aaPredicted RBP20.35■□□□□ 0.85
ETFRF1-211ENST00000557540 C1QBPQ07021 282 aaKnown RBP20.25■□□□□ 0.83
ETFRF1-211ENST00000557540 SLC4A2P04920 1241 aa20.16■□□□□ 0.82
ETFRF1-211ENST00000557540 U3KPZ7 1027 aaPredicted RBP20.07■□□□□ 0.8
ETFRF1-211ENST00000557540 SLC4A1APQ9BWU0 796 aaKnown RBP20.05■□□□□ 0.8
ETFRF1-211ENST00000557540 SPINK5Q9NQ38 1064 aaPredicted RBP19.66■□□□□ 0.74
ETFRF1-211ENST00000557540 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.6■□□□□ 0.73
ETFRF1-211ENST00000557540 HNRNPUL2Q1KMD3 747 aaKnown RBP19.6■□□□□ 0.73
ETFRF1-211ENST00000557540 FOXD4L1Q9NU39 408 aa19.6■□□□□ 0.73
ETFRF1-211ENST00000557540 CAPN15O75808 1086 aa19.57■□□□□ 0.72
ETFRF1-211ENST00000557540 MYCNP04198 464 aaPredicted RBP19.57■□□□□ 0.72
ETFRF1-211ENST00000557540 SAMD1Q6SPF0 538 aaPredicted RBP19.52■□□□□ 0.72
ETFRF1-211ENST00000557540 ZBTB22O15209 634 aa19.5■□□□□ 0.71
ETFRF1-211ENST00000557540 APLP2Q06481 763 aa19.49■□□□□ 0.71
ETFRF1-211ENST00000557540 DSG3P32926 999 aa19.39■□□□□ 0.69
ETFRF1-211ENST00000557540 TRHP20396 242 aaPredicted RBP19.38■□□□□ 0.69
ETFRF1-211ENST00000557540 ZNF219Q9P2Y4 722 aaPredicted RBP19.33■□□□□ 0.68
ETFRF1-211ENST00000557540 ABCB7O75027 752 aa19.18■□□□□ 0.66
ETFRF1-211ENST00000557540 ATF5Q9Y2D1 282 aaPredicted RBP19.14■□□□□ 0.65
ETFRF1-211ENST00000557540 CSRNP3Q8WYN3 585 aa18.97■□□□□ 0.63
ETFRF1-211ENST00000557540 ATXN8OSP0DMR3 200 aa18.96■□□□□ 0.63
ETFRF1-211ENST00000557540 POLA2Q14181 598 aa18.96■□□□□ 0.63
ETFRF1-211ENST00000557540 EHMT2Q96KQ7 1210 aa18.92■□□□□ 0.62
ETFRF1-211ENST00000557540 ZBTB12Q9Y330 459 aaPredicted RBP18.56■□□□□ 0.56
ETFRF1-211ENST00000557540 RBM42Q9BTD8 480 aaKnown RBP18.44■□□□□ 0.54
ETFRF1-211ENST00000557540 OSCARQ8IYS5 282 aa18.33■□□□□ 0.52
ETFRF1-211ENST00000557540 FBLN2P98095 1184 aa18.3■□□□□ 0.52
ETFRF1-211ENST00000557540 MKRN4PQ13434 485 aaPredicted RBP18.27■□□□□ 0.52
ETFRF1-211ENST00000557540 AKT1S1Q96B36 256 aa18.13■□□□□ 0.49
ETFRF1-211ENST00000557540 SPDYE2BA6NHP3 402 aa18.05■□□□□ 0.48
ETFRF1-211ENST00000557540 SPDYE6P0CI01 402 aa18.05■□□□□ 0.48
ETFRF1-211ENST00000557540 SPDYE2Q495Y8 402 aa18.05■□□□□ 0.48
ETFRF1-211ENST00000557540 REM2Q8IYK8 340 aaPredicted RBP17.98■□□□□ 0.47
ETFRF1-211ENST00000557540 ZNF692Q9BU19 519 aaPredicted RBP17.91■□□□□ 0.46
ETFRF1-211ENST00000557540 POTEHQ6S545 545 aa17.9■□□□□ 0.46
ETFRF1-211ENST00000557540 CHRDL2Q6WN34 429 aa17.9■□□□□ 0.46
ETFRF1-211ENST00000557540 SSUH2Q9Y2M2 353 aa17.87■□□□□ 0.45
ETFRF1-211ENST00000557540 PITPNM1O00562 1244 aa17.78■□□□□ 0.44
ETFRF1-211ENST00000557540 PABPN1Q86U42 306 aaKnown RBP eCLIP17.67■□□□□ 0.42
ETFRF1-211ENST00000557540 SPDYE1Q8NFV5 336 aaPredicted RBP17.63■□□□□ 0.41
ETFRF1-211ENST00000557540 SPDYE4A6NLX3 237 aa17.6■□□□□ 0.41
ETFRF1-211ENST00000557540 PIP4P2Q8N4L2 257 aa17.58■□□□□ 0.4
ETFRF1-211ENST00000557540 CLEC11AQ9Y240 323 aa17.58■□□□□ 0.4
ETFRF1-211ENST00000557540 FXR2P51116 673 aaKnown RBP eCLIP17.55■□□□□ 0.4
ETFRF1-211ENST00000557540 PRR29P0C7W0 189 aa17.36■□□□□ 0.37
ETFRF1-211ENST00000557540 PRKAR2AP13861 404 aaKnown RBP17.32■□□□□ 0.36
ETFRF1-211ENST00000557540 PROM2Q8N271 834 aa17.25■□□□□ 0.35
ETFRF1-211ENST00000557540 STAG3Q9UJ98 1225 aa17.24■□□□□ 0.35
ETFRF1-211ENST00000557540 CHADLQ6NUI6 762 aa17.23■□□□□ 0.35
ETFRF1-211ENST00000557540 FKBP8Q14318 412 aa17.15■□□□□ 0.34
ETFRF1-211ENST00000557540 HAX1O00165 279 aa17.13■□□□□ 0.33
ETFRF1-211ENST00000557540 CREBZFQ9NS37 354 aa17.05■□□□□ 0.32
ETFRF1-211ENST00000557540 FARP1Q9Y4F1 1045 aaPredicted RBP17.01■□□□□ 0.31
ETFRF1-211ENST00000557540 EVX2Q03828 476 aa17■□□□□ 0.31
ETFRF1-211ENST00000557540 C19orf67A6NJJ6 358 aa16.97■□□□□ 0.31
ETFRF1-211ENST00000557540 SP7Q8TDD2 431 aaPredicted RBP16.97■□□□□ 0.31
ETFRF1-211ENST00000557540 MNX1P50219 401 aaPredicted RBP16.82■□□□□ 0.28
ETFRF1-211ENST00000557540 CD44P16070 742 aaKnown RBP16.78■□□□□ 0.28
ETFRF1-211ENST00000557540 MIER1Q8N108 512 aa16.74■□□□□ 0.27
ETFRF1-211ENST00000557540 NPM1P06748 294 aaKnown RBP eCLIP16.71■□□□□ 0.27
ETFRF1-211ENST00000557540 PLEKHG5O94827 1062 aa16.64■□□□□ 0.25
ETFRF1-211ENST00000557540 PLCD3Q8N3E9 789 aa16.64■□□□□ 0.25
ETFRF1-211ENST00000557540 FBXO3Q9UK99 471 aa16.64■□□□□ 0.25
ETFRF1-211ENST00000557540 GABBR2O75899 941 aa16.62■□□□□ 0.25
ETFRF1-211ENST00000557540 ZRANB1Q9UGI0 708 aa16.62■□□□□ 0.25
ETFRF1-211ENST00000557540 ZNF579Q8NAF0 562 aaKnown RBP16.54■□□□□ 0.24
ETFRF1-211ENST00000557540 PAK3O75914 559 aaPredicted RBP16.53■□□□□ 0.24
ETFRF1-211ENST00000557540 CLCN6P51797 869 aa16.46■□□□□ 0.23
ETFRF1-211ENST00000557540 ZBTB47Q9UFB7 747 aaPredicted RBP16.46■□□□□ 0.23
ETFRF1-211ENST00000557540 VASPP50552 380 aaPredicted RBP16.45■□□□□ 0.22
ETFRF1-211ENST00000557540 TSPYL2Q9H2G4 693 aaPredicted RBP16.45■□□□□ 0.22
ETFRF1-211ENST00000557540 PHF12Q96QT6 1004 aa16.44■□□□□ 0.22
ETFRF1-211ENST00000557540 RASEFQ8IZ41 740 aa16.42■□□□□ 0.22
ETFRF1-211ENST00000557540 NUBP1P53384 320 aa16.38■□□□□ 0.21
ETFRF1-211ENST00000557540 CCDC61Q9Y6R9 512 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms