RNA–Protein interactions for RNA: ENST00000492841.1

TPT1P3-201, Transcript of tumor protein, translationally-controlled 1 pseudogene 3, humanhuman

BASIC

Gene TPT1P3, Length 512 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1P3-201ENST00000492841 AEBP2Q6ZN18 517 aaPredicted RBP23.58■■□□□ 1.37
TPT1P3-201ENST00000492841 CHIC1Q5VXU3 224 aa22.8■■□□□ 1.24
TPT1P3-201ENST00000492841 SENP3Q9H4L4 574 aaPredicted RBP20.29■□□□□ 0.84
TPT1P3-201ENST00000492841 PHF23Q9BUL5 403 aaPredicted RBP20.19■□□□□ 0.82
TPT1P3-201ENST00000492841 POTEDQ86YR6 584 aa19.07■□□□□ 0.64
TPT1P3-201ENST00000492841 FOXD1Q16676 465 aa18.99■□□□□ 0.63
TPT1P3-201ENST00000492841 PLPPR3Q6T4P5 718 aa18.6■□□□□ 0.57
TPT1P3-201ENST00000492841 MSH5O43196 834 aa18.13■□□□□ 0.49
TPT1P3-201ENST00000492841 PPP6R1Q9UPN7 881 aa17.7■□□□□ 0.42
TPT1P3-201ENST00000492841 ADRA2BP18089 450 aa17.67■□□□□ 0.42
TPT1P3-201ENST00000492841 PIAS4Q8N2W9 510 aaPredicted RBP17.57■□□□□ 0.4
TPT1P3-201ENST00000492841 KCNA4P22459 653 aa16.62■□□□□ 0.25
TPT1P3-201ENST00000492841 PPP4R3CPQ6ZMV5 832 aa16.48■□□□□ 0.23
TPT1P3-201ENST00000492841 SCAF1Q9H7N4 1312 aaKnown RBP16.09■□□□□ 0.17
TPT1P3-201ENST00000492841 CACNB1Q02641 598 aaPredicted RBP16.06■□□□□ 0.16
TPT1P3-201ENST00000492841 NCBP3Q53F19 620 aaKnown RBP16.04■□□□□ 0.16
TPT1P3-201ENST00000492841 MAPK8IP2Q13387 824 aaPredicted RBP16■□□□□ 0.15
TPT1P3-201ENST00000492841 NPM3O75607 178 aaKnown RBP15.98■□□□□ 0.15
TPT1P3-201ENST00000492841 DMRT2Q9Y5R5 561 aa15.95■□□□□ 0.14
TPT1P3-201ENST00000492841 CNKSR2Q8WXI2 1034 aa15.9■□□□□ 0.14
TPT1P3-201ENST00000492841 EHMT2Q96KQ7 1210 aa15.8■□□□□ 0.12
TPT1P3-201ENST00000492841 SLC4A1APQ9BWU0 796 aaKnown RBP15.8■□□□□ 0.12
TPT1P3-201ENST00000492841 CSRNP3Q8WYN3 585 aa15.57■□□□□ 0.08
TPT1P3-201ENST00000492841 DNAJC5BQ9UF47 199 aa15.55■□□□□ 0.08
TPT1P3-201ENST00000492841 RNF216Q9NWF9 866 aaPredicted RBP15.54■□□□□ 0.08
TPT1P3-201ENST00000492841 HOXD11P31277 338 aaPredicted RBP15.44■□□□□ 0.06
TPT1P3-201ENST00000492841 ZBTB22O15209 634 aa15.39■□□□□ 0.05
TPT1P3-201ENST00000492841 DCAF8L1A6NGE4 600 aa15.37■□□□□ 0.05
TPT1P3-201ENST00000492841 RNF39Q9H2S5 420 aa15.37■□□□□ 0.05
TPT1P3-201ENST00000492841 C1QBPQ07021 282 aaKnown RBP15.11■□□□□ 0.01
TPT1P3-201ENST00000492841 FOXD4L1Q9NU39 408 aa15.11■□□□□ 0.01
TPT1P3-201ENST00000492841 SLC4A2P04920 1241 aa15.05■□□□□ -0
TPT1P3-201ENST00000492841 POTEHQ6S545 545 aa14.8□□□□□ -0.04
TPT1P3-201ENST00000492841 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.69□□□□□ -0.06
TPT1P3-201ENST00000492841 MYCNP04198 464 aaPredicted RBP14.68□□□□□ -0.06
TPT1P3-201ENST00000492841 ATXN8OSP0DMR3 200 aa14.55□□□□□ -0.08
TPT1P3-201ENST00000492841 U3KPZ7 1027 aaPredicted RBP14.52□□□□□ -0.09
TPT1P3-201ENST00000492841 ATF5Q9Y2D1 282 aaPredicted RBP14.39□□□□□ -0.11
TPT1P3-201ENST00000492841 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.32□□□□□ -0.12
TPT1P3-201ENST00000492841 HNRNPUL2Q1KMD3 747 aaKnown RBP14.32□□□□□ -0.12
TPT1P3-201ENST00000492841 SAMD1Q6SPF0 538 aaPredicted RBP14.29□□□□□ -0.12
TPT1P3-201ENST00000492841 DSG3P32926 999 aa14.11□□□□□ -0.15
TPT1P3-201ENST00000492841 APLP2Q06481 763 aa14.1□□□□□ -0.15
TPT1P3-201ENST00000492841 SPINK5Q9NQ38 1064 aaPredicted RBP14.06□□□□□ -0.16
TPT1P3-201ENST00000492841 CAPN15O75808 1086 aa14.02□□□□□ -0.17
TPT1P3-201ENST00000492841 ZNF219Q9P2Y4 722 aaPredicted RBP14□□□□□ -0.17
TPT1P3-201ENST00000492841 TRHP20396 242 aaPredicted RBP13.95□□□□□ -0.18
TPT1P3-201ENST00000492841 FKBP8Q14318 412 aa13.93□□□□□ -0.18
TPT1P3-201ENST00000492841 MKRN4PQ13434 485 aaPredicted RBP13.79□□□□□ -0.2
TPT1P3-201ENST00000492841 POLA2Q14181 598 aa13.78□□□□□ -0.2
TPT1P3-201ENST00000492841 ABCB7O75027 752 aa13.73□□□□□ -0.21
TPT1P3-201ENST00000492841 FBLN2P98095 1184 aa13.54□□□□□ -0.24
TPT1P3-201ENST00000492841 PROM2Q8N271 834 aa13.54□□□□□ -0.24
TPT1P3-201ENST00000492841 SPDYE4A6NLX3 237 aa13.53□□□□□ -0.24
TPT1P3-201ENST00000492841 CHRDL2Q6WN34 429 aa13.53□□□□□ -0.24
TPT1P3-201ENST00000492841 RBM42Q9BTD8 480 aaKnown RBP13.53□□□□□ -0.24
TPT1P3-201ENST00000492841 SP7Q8TDD2 431 aaPredicted RBP13.49□□□□□ -0.25
TPT1P3-201ENST00000492841 ZBTB12Q9Y330 459 aaPredicted RBP13.49□□□□□ -0.25
TPT1P3-201ENST00000492841 RTN4Q9NQC3 1192 aaKnown RBP13.48□□□□□ -0.25
TPT1P3-201ENST00000492841 AMER1Q5JTC6 1135 aaPredicted RBP13.38□□□□□ -0.27
TPT1P3-201ENST00000492841 OSCARQ8IYS5 282 aa13.3□□□□□ -0.28
TPT1P3-201ENST00000492841 FBXO3Q9UK99 471 aa13.25□□□□□ -0.29
TPT1P3-201ENST00000492841 SSUH2Q9Y2M2 353 aa13.21□□□□□ -0.29
TPT1P3-201ENST00000492841 SPDYE2BA6NHP3 402 aa13.18□□□□□ -0.3
TPT1P3-201ENST00000492841 SPDYE6P0CI01 402 aa13.18□□□□□ -0.3
TPT1P3-201ENST00000492841 SPDYE2Q495Y8 402 aa13.18□□□□□ -0.3
TPT1P3-201ENST00000492841 ZNF692Q9BU19 519 aaPredicted RBP13.18□□□□□ -0.3
TPT1P3-201ENST00000492841 VASPP50552 380 aaPredicted RBP13.16□□□□□ -0.3
TPT1P3-201ENST00000492841 IFNLR1Q8IU57 520 aaPredicted RBP13.07□□□□□ -0.32
TPT1P3-201ENST00000492841 HAX1O00165 279 aa13.04□□□□□ -0.32
TPT1P3-201ENST00000492841 PABPN1Q86U42 306 aaKnown RBP eCLIP13.02□□□□□ -0.33
TPT1P3-201ENST00000492841 PIP4P2Q8N4L2 257 aa13.02□□□□□ -0.33
TPT1P3-201ENST00000492841 AKT1S1Q96B36 256 aa13.02□□□□□ -0.33
TPT1P3-201ENST00000492841 STAG3Q9UJ98 1225 aa12.91□□□□□ -0.34
TPT1P3-201ENST00000492841 REM2Q8IYK8 340 aaPredicted RBP12.88□□□□□ -0.35
TPT1P3-201ENST00000492841 PKD2Q13563 968 aa12.82□□□□□ -0.36
TPT1P3-201ENST00000492841 FXR2P51116 673 aaKnown RBP eCLIP12.81□□□□□ -0.36
TPT1P3-201ENST00000492841 PITPNM1O00562 1244 aa12.76□□□□□ -0.37
TPT1P3-201ENST00000492841 EVX2Q03828 476 aa12.76□□□□□ -0.37
TPT1P3-201ENST00000492841 SLC24A1O60721 1099 aa12.75□□□□□ -0.37
TPT1P3-201ENST00000492841 SPOCK2Q92563 424 aa12.74□□□□□ -0.37
TPT1P3-201ENST00000492841 SPDYE1Q8NFV5 336 aaPredicted RBP12.73□□□□□ -0.37
TPT1P3-201ENST00000492841 PLCD3Q8N3E9 789 aa12.72□□□□□ -0.37
TPT1P3-201ENST00000492841 MIER1Q8N108 512 aa12.71□□□□□ -0.37
TPT1P3-201ENST00000492841 KLHL34Q8N239 644 aa12.69□□□□□ -0.38
TPT1P3-201ENST00000492841 CLEC11AQ9Y240 323 aa12.69□□□□□ -0.38
TPT1P3-201ENST00000492841 LHX8Q68G74 356 aa12.64□□□□□ -0.39
TPT1P3-201ENST00000492841 PRR29P0C7W0 189 aa12.6□□□□□ -0.39
TPT1P3-201ENST00000492841 MNX1P50219 401 aaPredicted RBP12.56□□□□□ -0.4
TPT1P3-201ENST00000492841 CREBZFQ9NS37 354 aa12.56□□□□□ -0.4
TPT1P3-201ENST00000492841 PLSCR2Q9NRY7 297 aa12.55□□□□□ -0.4
TPT1P3-201ENST00000492841 ZBTB47Q9UFB7 747 aaPredicted RBP12.53□□□□□ -0.4
TPT1P3-201ENST00000492841 ECM2O94769 699 aaPredicted RBP12.51□□□□□ -0.41
TPT1P3-201ENST00000492841 PLEKHG5O94827 1062 aa12.51□□□□□ -0.41
TPT1P3-201ENST00000492841 NUBP1P53384 320 aa12.51□□□□□ -0.41
TPT1P3-201ENST00000492841 RGL2O15211 777 aa12.49□□□□□ -0.41
TPT1P3-201ENST00000492841 GABBR2O75899 941 aa12.46□□□□□ -0.41
TPT1P3-201ENST00000492841 NPM1P06748 294 aaKnown RBP eCLIP12.44□□□□□ -0.42
TPT1P3-201ENST00000492841 PLCB2Q00722 1185 aa12.44□□□□□ -0.42
TPT1P3-201ENST00000492841 C19orf67A6NJJ6 358 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms