RNA–Protein interactions for RNA: ENST00000516817.1

RNU6-1308P-201, Transcript of RNA, U6 small nuclear 1308, pseudogene, humanhuman

BASIC

Gene RNU6-1308P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1308P-201ENST00000516817 CHIC1Q5VXU3 224 aa17.67■□□□□ 0.42
RNU6-1308P-201ENST00000516817 AEBP2Q6ZN18 517 aaPredicted RBP17.22■□□□□ 0.35
RNU6-1308P-201ENST00000516817 PHF23Q9BUL5 403 aaPredicted RBP15.51■□□□□ 0.07
RNU6-1308P-201ENST00000516817 PLPPR3Q6T4P5 718 aa14.75□□□□□ -0.05
RNU6-1308P-201ENST00000516817 SENP3Q9H4L4 574 aaPredicted RBP14.66□□□□□ -0.06
RNU6-1308P-201ENST00000516817 ADRA2BP18089 450 aa13.6□□□□□ -0.23
RNU6-1308P-201ENST00000516817 KCNA4P22459 653 aa13.54□□□□□ -0.24
RNU6-1308P-201ENST00000516817 EHMT2Q96KQ7 1210 aa13.54□□□□□ -0.24
RNU6-1308P-201ENST00000516817 PPP6R1Q9UPN7 881 aa13.41□□□□□ -0.26
RNU6-1308P-201ENST00000516817 FOXD1Q16676 465 aa13.39□□□□□ -0.27
RNU6-1308P-201ENST00000516817 SLC4A1APQ9BWU0 796 aaKnown RBP13.1□□□□□ -0.31
RNU6-1308P-201ENST00000516817 PPP4R3CPQ6ZMV5 832 aa13.03□□□□□ -0.32
RNU6-1308P-201ENST00000516817 NCBP3Q53F19 620 aaKnown RBP13.02□□□□□ -0.33
RNU6-1308P-201ENST00000516817 CSRNP3Q8WYN3 585 aa13.01□□□□□ -0.33
RNU6-1308P-201ENST00000516817 PIAS4Q8N2W9 510 aaPredicted RBP12.89□□□□□ -0.35
RNU6-1308P-201ENST00000516817 NPM3O75607 178 aaKnown RBP12.7□□□□□ -0.38
RNU6-1308P-201ENST00000516817 CNKSR2Q8WXI2 1034 aa12.55□□□□□ -0.4
RNU6-1308P-201ENST00000516817 SCAF1Q9H7N4 1312 aaKnown RBP12.53□□□□□ -0.4
RNU6-1308P-201ENST00000516817 ZBTB22O15209 634 aa12.41□□□□□ -0.42
RNU6-1308P-201ENST00000516817 FOXD4L1Q9NU39 408 aa12.34□□□□□ -0.43
RNU6-1308P-201ENST00000516817 DNAJC5BQ9UF47 199 aa12.3□□□□□ -0.44
RNU6-1308P-201ENST00000516817 MSH5O43196 834 aa12.2□□□□□ -0.46
RNU6-1308P-201ENST00000516817 SLC24A1O60721 1099 aa12.17□□□□□ -0.46
RNU6-1308P-201ENST00000516817 AMER1Q5JTC6 1135 aaPredicted RBP12.15□□□□□ -0.46
RNU6-1308P-201ENST00000516817 RNF216Q9NWF9 866 aaPredicted RBP12.11□□□□□ -0.47
RNU6-1308P-201ENST00000516817 RTN4Q9NQC3 1192 aaKnown RBP12□□□□□ -0.49
RNU6-1308P-201ENST00000516817 MAPK8IP2Q13387 824 aaPredicted RBP11.97□□□□□ -0.49
RNU6-1308P-201ENST00000516817 ATXN8OSP0DMR3 200 aa11.88□□□□□ -0.51
RNU6-1308P-201ENST00000516817 HOXD11P31277 338 aaPredicted RBP11.83□□□□□ -0.52
RNU6-1308P-201ENST00000516817 MYCNP04198 464 aaPredicted RBP11.81□□□□□ -0.52
RNU6-1308P-201ENST00000516817 DMRT2Q9Y5R5 561 aa11.79□□□□□ -0.52
RNU6-1308P-201ENST00000516817 FKBP8Q14318 412 aa11.77□□□□□ -0.53
RNU6-1308P-201ENST00000516817 SLC4A2P04920 1241 aa11.76□□□□□ -0.53
RNU6-1308P-201ENST00000516817 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.44□□□□□ -0.58
RNU6-1308P-201ENST00000516817 HNRNPUL2Q1KMD3 747 aaKnown RBP11.44□□□□□ -0.58
RNU6-1308P-201ENST00000516817 SAMD1Q6SPF0 538 aaPredicted RBP11.39□□□□□ -0.59
RNU6-1308P-201ENST00000516817 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.31□□□□□ -0.6
RNU6-1308P-201ENST00000516817 FBXO3Q9UK99 471 aa11.26□□□□□ -0.61
RNU6-1308P-201ENST00000516817 ATF5Q9Y2D1 282 aaPredicted RBP11.26□□□□□ -0.61
RNU6-1308P-201ENST00000516817 DCAF8L1A6NGE4 600 aa11.23□□□□□ -0.61
RNU6-1308P-201ENST00000516817 APLP2Q06481 763 aa11.19□□□□□ -0.62
RNU6-1308P-201ENST00000516817 U3KPZ7 1027 aaPredicted RBP11.15□□□□□ -0.62
RNU6-1308P-201ENST00000516817 PLCB2Q00722 1185 aa11.12□□□□□ -0.63
RNU6-1308P-201ENST00000516817 POTEDQ86YR6 584 aa11.11□□□□□ -0.63
RNU6-1308P-201ENST00000516817 ZNF219Q9P2Y4 722 aaPredicted RBP11.11□□□□□ -0.63
RNU6-1308P-201ENST00000516817 SPDYE4A6NLX3 237 aa11.06□□□□□ -0.64
RNU6-1308P-201ENST00000516817 VASPP50552 380 aaPredicted RBP11□□□□□ -0.65
RNU6-1308P-201ENST00000516817 HAP1P54257 671 aaPredicted RBP10.96□□□□□ -0.65
RNU6-1308P-201ENST00000516817 PROM2Q8N271 834 aa10.96□□□□□ -0.65
RNU6-1308P-201ENST00000516817 DCAF8L2P0C7V8 631 aa10.94□□□□□ -0.66
RNU6-1308P-201ENST00000516817 FBLN2P98095 1184 aa10.94□□□□□ -0.66
RNU6-1308P-201ENST00000516817 BCANQ96GW7 911 aa10.93□□□□□ -0.66
RNU6-1308P-201ENST00000516817 MKRN4PQ13434 485 aaPredicted RBP10.85□□□□□ -0.67
RNU6-1308P-201ENST00000516817 VSIG10Q8N0Z9 540 aa10.85□□□□□ -0.67
RNU6-1308P-201ENST00000516817 IFNLR1Q8IU57 520 aaPredicted RBP10.84□□□□□ -0.67
RNU6-1308P-201ENST00000516817 PKD2Q13563 968 aa10.77□□□□□ -0.69
RNU6-1308P-201ENST00000516817 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.77□□□□□ -0.69
RNU6-1308P-201ENST00000516817 ZBTB12Q9Y330 459 aaPredicted RBP10.72□□□□□ -0.69
RNU6-1308P-201ENST00000516817 BBXQ8WY36 941 aaPredicted RBP10.71□□□□□ -0.69
RNU6-1308P-201ENST00000516817 TAOK2Q9UL54 1235 aa10.71□□□□□ -0.69
RNU6-1308P-201ENST00000516817 TRHP20396 242 aaPredicted RBP10.69□□□□□ -0.7
RNU6-1308P-201ENST00000516817 SPOCK2Q92563 424 aa10.68□□□□□ -0.7
RNU6-1308P-201ENST00000516817 POLA2Q14181 598 aa10.67□□□□□ -0.7
RNU6-1308P-201ENST00000516817 KLHL34Q8N239 644 aa10.66□□□□□ -0.7
RNU6-1308P-201ENST00000516817 ECM2O94769 699 aaPredicted RBP10.64□□□□□ -0.71
RNU6-1308P-201ENST00000516817 PRKCSHP14314 528 aaPredicted RBP10.6□□□□□ -0.71
RNU6-1308P-201ENST00000516817 STAG3Q9UJ98 1225 aa10.6□□□□□ -0.71
RNU6-1308P-201ENST00000516817 PAXIP1Q6ZW49 1069 aaPredicted RBP10.59□□□□□ -0.71
RNU6-1308P-201ENST00000516817 CAPN15O75808 1086 aa10.58□□□□□ -0.72
RNU6-1308P-201ENST00000516817 SPINK5Q9NQ38 1064 aaPredicted RBP10.57□□□□□ -0.72
RNU6-1308P-201ENST00000516817 CFAP44Q96MT7 982 aa10.56□□□□□ -0.72
RNU6-1308P-201ENST00000516817 TPRNQ4KMQ1 711 aa10.53□□□□□ -0.72
RNU6-1308P-201ENST00000516817 PLCD3Q8N3E9 789 aa10.52□□□□□ -0.73
RNU6-1308P-201ENST00000516817 SPRYD3Q8NCJ5 442 aa10.52□□□□□ -0.73
RNU6-1308P-201ENST00000516817 KDM2AQ9Y2K7 1162 aa10.52□□□□□ -0.73
RNU6-1308P-201ENST00000516817 NPM1P06748 294 aaKnown RBP eCLIP10.48□□□□□ -0.73
RNU6-1308P-201ENST00000516817 ZNF692Q9BU19 519 aaPredicted RBP10.45□□□□□ -0.74
RNU6-1308P-201ENST00000516817 RNF39Q9H2S5 420 aa10.45□□□□□ -0.74
RNU6-1308P-201ENST00000516817 RGL2O15211 777 aa10.44□□□□□ -0.74
RNU6-1308P-201ENST00000516817 PLEKHG5O94827 1062 aa10.44□□□□□ -0.74
RNU6-1308P-201ENST00000516817 ZBTB47Q9UFB7 747 aaPredicted RBP10.44□□□□□ -0.74
RNU6-1308P-201ENST00000516817 C1QBPQ07021 282 aaKnown RBP10.43□□□□□ -0.74
RNU6-1308P-201ENST00000516817 SPDYE2BA6NHP3 402 aa10.42□□□□□ -0.74
RNU6-1308P-201ENST00000516817 SPDYE6P0CI01 402 aa10.42□□□□□ -0.74
RNU6-1308P-201ENST00000516817 SPDYE2Q495Y8 402 aa10.42□□□□□ -0.74
RNU6-1308P-201ENST00000516817 TRIM41Q8WV44 630 aa10.41□□□□□ -0.74
RNU6-1308P-201ENST00000516817 MIER1Q8N108 512 aa10.4□□□□□ -0.74
RNU6-1308P-201ENST00000516817 NBR1Q14596 966 aa10.39□□□□□ -0.75
RNU6-1308P-201ENST00000516817 ABCB7O75027 752 aa10.38□□□□□ -0.75
RNU6-1308P-201ENST00000516817 TSHZ2Q9NRE2 1034 aa10.38□□□□□ -0.75
RNU6-1308P-201ENST00000516817 CHGAP10645 457 aaKnown RBP10.37□□□□□ -0.75
RNU6-1308P-201ENST00000516817 SSUH2Q9Y2M2 353 aa10.37□□□□□ -0.75
RNU6-1308P-201ENST00000516817 CIZ1Q9ULV3 898 aaPredicted RBP10.36□□□□□ -0.75
RNU6-1308P-201ENST00000516817 PABPN1Q86U42 306 aaKnown RBP eCLIP10.32□□□□□ -0.76
RNU6-1308P-201ENST00000516817 DNAJC5Q9H3Z4 198 aa10.3□□□□□ -0.76
RNU6-1308P-201ENST00000516817 OSCARQ8IYS5 282 aa10.29□□□□□ -0.76
RNU6-1308P-201ENST00000516817 HS6ST3Q8IZP7 471 aa10.29□□□□□ -0.76
RNU6-1308P-201ENST00000516817 GSE1Q14687 1217 aa10.23□□□□□ -0.77
RNU6-1308P-201ENST00000516817 DSG3P32926 999 aa10.19□□□□□ -0.78
RNU6-1308P-201ENST00000516817 ERICH6Q7L0X2 663 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms