RNA–Protein interactions for RNA: ENST00000503735.1

NENFP3-201, Transcript of neudesin neurotrophic factor pseudogene 3, humanhuman

BASIC

Gene NENFP3, Length 313 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NENFP3-201ENST00000503735 AEBP2Q6ZN18 517 aaPredicted RBP24.64■■□□□ 1.54
NENFP3-201ENST00000503735 CHIC1Q5VXU3 224 aa23.3■■□□□ 1.32
NENFP3-201ENST00000503735 SENP3Q9H4L4 574 aaPredicted RBP21.14■□□□□ 0.97
NENFP3-201ENST00000503735 PHF23Q9BUL5 403 aaPredicted RBP20.79■□□□□ 0.92
NENFP3-201ENST00000503735 FOXD1Q16676 465 aa19.66■□□□□ 0.74
NENFP3-201ENST00000503735 PLPPR3Q6T4P5 718 aa18.6■□□□□ 0.57
NENFP3-201ENST00000503735 MSH5O43196 834 aa18.54■□□□□ 0.56
NENFP3-201ENST00000503735 PIAS4Q8N2W9 510 aaPredicted RBP18.42■□□□□ 0.54
NENFP3-201ENST00000503735 POTEDQ86YR6 584 aa18.28■□□□□ 0.52
NENFP3-201ENST00000503735 PPP6R1Q9UPN7 881 aa18.22■□□□□ 0.51
NENFP3-201ENST00000503735 ADRA2BP18089 450 aa18.21■□□□□ 0.51
NENFP3-201ENST00000503735 SCAF1Q9H7N4 1312 aaKnown RBP16.75■□□□□ 0.27
NENFP3-201ENST00000503735 MAPK8IP2Q13387 824 aaPredicted RBP16.75■□□□□ 0.27
NENFP3-201ENST00000503735 DMRT2Q9Y5R5 561 aa16.7■□□□□ 0.26
NENFP3-201ENST00000503735 PPP4R3CPQ6ZMV5 832 aa16.27■□□□□ 0.2
NENFP3-201ENST00000503735 DCAF8L1A6NGE4 600 aa16.16■□□□□ 0.18
NENFP3-201ENST00000503735 HOXD11P31277 338 aaPredicted RBP16.01■□□□□ 0.15
NENFP3-201ENST00000503735 CACNB1Q02641 598 aaPredicted RBP16.01■□□□□ 0.15
NENFP3-201ENST00000503735 CNKSR2Q8WXI2 1034 aa16■□□□□ 0.15
NENFP3-201ENST00000503735 RNF216Q9NWF9 866 aaPredicted RBP15.88■□□□□ 0.13
NENFP3-201ENST00000503735 RNF39Q9H2S5 420 aa15.74■□□□□ 0.11
NENFP3-201ENST00000503735 NCBP3Q53F19 620 aaKnown RBP15.66■□□□□ 0.1
NENFP3-201ENST00000503735 C1QBPQ07021 282 aaKnown RBP15.53■□□□□ 0.08
NENFP3-201ENST00000503735 DNAJC5BQ9UF47 199 aa15.46■□□□□ 0.07
NENFP3-201ENST00000503735 NPM3O75607 178 aaKnown RBP15.36■□□□□ 0.05
NENFP3-201ENST00000503735 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.36■□□□□ 0.05
NENFP3-201ENST00000503735 U3KPZ7 1027 aaPredicted RBP14.95□□□□□ -0.02
NENFP3-201ENST00000503735 KCNA4P22459 653 aa14.93□□□□□ -0.02
NENFP3-201ENST00000503735 CAPN15O75808 1086 aa14.84□□□□□ -0.03
NENFP3-201ENST00000503735 SPINK5Q9NQ38 1064 aaPredicted RBP14.77□□□□□ -0.05
NENFP3-201ENST00000503735 DSG3P32926 999 aa14.69□□□□□ -0.06
NENFP3-201ENST00000503735 SLC4A2P04920 1241 aa14.66□□□□□ -0.06
NENFP3-201ENST00000503735 APLP2Q06481 763 aa14.63□□□□□ -0.07
NENFP3-201ENST00000503735 TRHP20396 242 aaPredicted RBP14.56□□□□□ -0.08
NENFP3-201ENST00000503735 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.55□□□□□ -0.08
NENFP3-201ENST00000503735 HNRNPUL2Q1KMD3 747 aaKnown RBP14.55□□□□□ -0.08
NENFP3-201ENST00000503735 ZNF219Q9P2Y4 722 aaPredicted RBP14.52□□□□□ -0.09
NENFP3-201ENST00000503735 ABCB7O75027 752 aa14.47□□□□□ -0.09
NENFP3-201ENST00000503735 SAMD1Q6SPF0 538 aaPredicted RBP14.45□□□□□ -0.1
NENFP3-201ENST00000503735 NISCHQ9Y2I1 1504 aa14.32□□□□□ -0.12
NENFP3-201ENST00000503735 POTEHQ6S545 545 aa14.32□□□□□ -0.12
NENFP3-201ENST00000503735 MYCNP04198 464 aaPredicted RBP14.26□□□□□ -0.13
NENFP3-201ENST00000503735 SLC4A1APQ9BWU0 796 aaKnown RBP14.13□□□□□ -0.15
NENFP3-201ENST00000503735 RBM42Q9BTD8 480 aaKnown RBP14.11□□□□□ -0.15
NENFP3-201ENST00000503735 POLA2Q14181 598 aa14.09□□□□□ -0.15
NENFP3-201ENST00000503735 FOXD4L1Q9NU39 408 aa14.03□□□□□ -0.16
NENFP3-201ENST00000503735 ATF5Q9Y2D1 282 aaPredicted RBP13.86□□□□□ -0.19
NENFP3-201ENST00000503735 ZBTB12Q9Y330 459 aaPredicted RBP13.85□□□□□ -0.19
NENFP3-201ENST00000503735 CHRDL2Q6WN34 429 aa13.82□□□□□ -0.2
NENFP3-201ENST00000503735 AKT1S1Q96B36 256 aa13.7□□□□□ -0.22
NENFP3-201ENST00000503735 ZBTB22O15209 634 aa13.69□□□□□ -0.22
NENFP3-201ENST00000503735 OSCARQ8IYS5 282 aa13.67□□□□□ -0.22
NENFP3-201ENST00000503735 ATXN8OSP0DMR3 200 aa13.57□□□□□ -0.24
NENFP3-201ENST00000503735 REM2Q8IYK8 340 aaPredicted RBP13.56□□□□□ -0.24
NENFP3-201ENST00000503735 FBLN2P98095 1184 aa13.47□□□□□ -0.25
NENFP3-201ENST00000503735 PITPNM1O00562 1244 aa13.44□□□□□ -0.26
NENFP3-201ENST00000503735 PIP4P2Q8N4L2 257 aa13.43□□□□□ -0.26
NENFP3-201ENST00000503735 SP7Q8TDD2 431 aaPredicted RBP13.37□□□□□ -0.27
NENFP3-201ENST00000503735 SPDYE2BA6NHP3 402 aa13.36□□□□□ -0.27
NENFP3-201ENST00000503735 SPDYE6P0CI01 402 aa13.36□□□□□ -0.27
NENFP3-201ENST00000503735 SPDYE2Q495Y8 402 aa13.36□□□□□ -0.27
NENFP3-201ENST00000503735 FXR2P51116 673 aaKnown RBP eCLIP13.3□□□□□ -0.28
NENFP3-201ENST00000503735 HAX1O00165 279 aa13.29□□□□□ -0.28
NENFP3-201ENST00000503735 MKRN4PQ13434 485 aaPredicted RBP13.21□□□□□ -0.29
NENFP3-201ENST00000503735 CLEC11AQ9Y240 323 aa13.21□□□□□ -0.29
NENFP3-201ENST00000503735 SPDYE1Q8NFV5 336 aaPredicted RBP13.2□□□□□ -0.3
NENFP3-201ENST00000503735 ZNF692Q9BU19 519 aaPredicted RBP13.2□□□□□ -0.3
NENFP3-201ENST00000503735 SSUH2Q9Y2M2 353 aa13.13□□□□□ -0.31
NENFP3-201ENST00000503735 PRKAR2AP13861 404 aaKnown RBP13.11□□□□□ -0.31
NENFP3-201ENST00000503735 EVX2Q03828 476 aa12.99□□□□□ -0.33
NENFP3-201ENST00000503735 PABPN1Q86U42 306 aaKnown RBP eCLIP12.99□□□□□ -0.33
NENFP3-201ENST00000503735 PRR29P0C7W0 189 aa12.94□□□□□ -0.34
NENFP3-201ENST00000503735 CSRNP3Q8WYN3 585 aa12.93□□□□□ -0.34
NENFP3-201ENST00000503735 CCDC180Q9P1Z9 1646 aa12.91□□□□□ -0.34
NENFP3-201ENST00000503735 CHADLQ6NUI6 762 aa12.91□□□□□ -0.34
NENFP3-201ENST00000503735 C19orf67A6NJJ6 358 aa12.9□□□□□ -0.34
NENFP3-201ENST00000503735 EHMT2Q96KQ7 1210 aa12.81□□□□□ -0.36
NENFP3-201ENST00000503735 GABBR2O75899 941 aa12.75□□□□□ -0.37
NENFP3-201ENST00000503735 CD44P16070 742 aaKnown RBP12.71□□□□□ -0.37
NENFP3-201ENST00000503735 FARP1Q9Y4F1 1045 aaPredicted RBP12.71□□□□□ -0.37
NENFP3-201ENST00000503735 STAG3Q9UJ98 1225 aa12.62□□□□□ -0.39
NENFP3-201ENST00000503735 SPDYE4A6NLX3 237 aa12.6□□□□□ -0.39
NENFP3-201ENST00000503735 LHX8Q68G74 356 aa12.54□□□□□ -0.4
NENFP3-201ENST00000503735 CLCN6P51797 869 aa12.53□□□□□ -0.4
NENFP3-201ENST00000503735 CREBZFQ9NS37 354 aa12.52□□□□□ -0.41
NENFP3-201ENST00000503735 ZRANB1Q9UGI0 708 aa12.5□□□□□ -0.41
NENFP3-201ENST00000503735 ZNF579Q8NAF0 562 aaKnown RBP12.46□□□□□ -0.41
NENFP3-201ENST00000503735 DCBLD2Q96PD2 775 aa12.46□□□□□ -0.41
NENFP3-201ENST00000503735 ABCC9O60706 1549 aa12.44□□□□□ -0.42
NENFP3-201ENST00000503735 PAK3O75914 559 aaPredicted RBP12.44□□□□□ -0.42
NENFP3-201ENST00000503735 POTEIP0CG38 1075 aa12.43□□□□□ -0.42
NENFP3-201ENST00000503735 NPM1P06748 294 aaKnown RBP eCLIP12.37□□□□□ -0.43
NENFP3-201ENST00000503735 GALR2O43603 387 aaPredicted RBP12.31□□□□□ -0.44
NENFP3-201ENST00000503735 PHF12Q96QT6 1004 aa12.3□□□□□ -0.44
NENFP3-201ENST00000503735 MNX1P50219 401 aaPredicted RBP12.24□□□□□ -0.45
NENFP3-201ENST00000503735 PROM2Q8N271 834 aa12.16□□□□□ -0.46
NENFP3-201ENST00000503735 PLEKHG5O94827 1062 aa12.14□□□□□ -0.47
NENFP3-201ENST00000503735 TSPYL2Q9H2G4 693 aaPredicted RBP12.13□□□□□ -0.47
NENFP3-201ENST00000503735 MS4A3Q96HJ5 214 aa12.12□□□□□ -0.47
NENFP3-201ENST00000503735 RB1CC1Q8TDY2 1594 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms