RNA–Protein interactions for RNA: ENST00000412758.2

NPM1P40-201, Transcript of nucleophosmin 1 pseudogene 40, humanhuman

BASIC

Gene NPM1P40, Length 733 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1P40-201ENST00000412758 AEBP2Q6ZN18 517 aaPredicted RBP20.99■□□□□ 0.95
NPM1P40-201ENST00000412758 CHIC1Q5VXU3 224 aa19.84■□□□□ 0.77
NPM1P40-201ENST00000412758 SENP3Q9H4L4 574 aaPredicted RBP17.91■□□□□ 0.46
NPM1P40-201ENST00000412758 PHF23Q9BUL5 403 aaPredicted RBP17.69■□□□□ 0.42
NPM1P40-201ENST00000412758 FOXD1Q16676 465 aa16.72■□□□□ 0.27
NPM1P40-201ENST00000412758 PLPPR3Q6T4P5 718 aa15.82■□□□□ 0.12
NPM1P40-201ENST00000412758 MSH5O43196 834 aa15.67■□□□□ 0.1
NPM1P40-201ENST00000412758 PIAS4Q8N2W9 510 aaPredicted RBP15.61■□□□□ 0.09
NPM1P40-201ENST00000412758 PPP6R1Q9UPN7 881 aa15.58■□□□□ 0.08
NPM1P40-201ENST00000412758 ADRA2BP18089 450 aa15.52■□□□□ 0.08
NPM1P40-201ENST00000412758 POTEDQ86YR6 584 aa15.46■□□□□ 0.07
NPM1P40-201ENST00000412758 MAPK8IP2Q13387 824 aaPredicted RBP14.29□□□□□ -0.12
NPM1P40-201ENST00000412758 SCAF1Q9H7N4 1312 aaKnown RBP14.2□□□□□ -0.14
NPM1P40-201ENST00000412758 DMRT2Q9Y5R5 561 aa14.19□□□□□ -0.14
NPM1P40-201ENST00000412758 PPP4R3CPQ6ZMV5 832 aa13.87□□□□□ -0.19
NPM1P40-201ENST00000412758 DCAF8L1A6NGE4 600 aa13.66□□□□□ -0.22
NPM1P40-201ENST00000412758 HOXD11P31277 338 aaPredicted RBP13.62□□□□□ -0.23
NPM1P40-201ENST00000412758 CNKSR2Q8WXI2 1034 aa13.61□□□□□ -0.23
NPM1P40-201ENST00000412758 CACNB1Q02641 598 aaPredicted RBP13.54□□□□□ -0.24
NPM1P40-201ENST00000412758 RNF216Q9NWF9 866 aaPredicted RBP13.51□□□□□ -0.25
NPM1P40-201ENST00000412758 RNF39Q9H2S5 420 aa13.37□□□□□ -0.27
NPM1P40-201ENST00000412758 NCBP3Q53F19 620 aaKnown RBP13.35□□□□□ -0.27
NPM1P40-201ENST00000412758 NPM3O75607 178 aaKnown RBP13.18□□□□□ -0.3
NPM1P40-201ENST00000412758 C1QBPQ07021 282 aaKnown RBP13.16□□□□□ -0.3
NPM1P40-201ENST00000412758 DNAJC5BQ9UF47 199 aa13.15□□□□□ -0.3
NPM1P40-201ENST00000412758 KCNA4P22459 653 aa13.02□□□□□ -0.33
NPM1P40-201ENST00000412758 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.02□□□□□ -0.33
NPM1P40-201ENST00000412758 U3KPZ7 1027 aaPredicted RBP12.7□□□□□ -0.38
NPM1P40-201ENST00000412758 CAPN15O75808 1086 aa12.57□□□□□ -0.4
NPM1P40-201ENST00000412758 SPINK5Q9NQ38 1064 aaPredicted RBP12.57□□□□□ -0.4
NPM1P40-201ENST00000412758 SLC4A2P04920 1241 aa12.56□□□□□ -0.4
NPM1P40-201ENST00000412758 DSG3P32926 999 aa12.49□□□□□ -0.41
NPM1P40-201ENST00000412758 TRHP20396 242 aaPredicted RBP12.35□□□□□ -0.43
NPM1P40-201ENST00000412758 APLP2Q06481 763 aa12.34□□□□□ -0.43
NPM1P40-201ENST00000412758 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.32□□□□□ -0.44
NPM1P40-201ENST00000412758 HNRNPUL2Q1KMD3 747 aaKnown RBP12.32□□□□□ -0.44
NPM1P40-201ENST00000412758 NISCHQ9Y2I1 1504 aa12.31□□□□□ -0.44
NPM1P40-201ENST00000412758 SLC4A1APQ9BWU0 796 aaKnown RBP12.3□□□□□ -0.44
NPM1P40-201ENST00000412758 ZNF219Q9P2Y4 722 aaPredicted RBP12.29□□□□□ -0.44
NPM1P40-201ENST00000412758 ABCB7O75027 752 aa12.27□□□□□ -0.45
NPM1P40-201ENST00000412758 SAMD1Q6SPF0 538 aaPredicted RBP12.25□□□□□ -0.45
NPM1P40-201ENST00000412758 MYCNP04198 464 aaPredicted RBP12.15□□□□□ -0.46
NPM1P40-201ENST00000412758 POTEHQ6S545 545 aa12.11□□□□□ -0.47
NPM1P40-201ENST00000412758 FOXD4L1Q9NU39 408 aa12.09□□□□□ -0.47
NPM1P40-201ENST00000412758 POLA2Q14181 598 aa11.99□□□□□ -0.49
NPM1P40-201ENST00000412758 ZBTB22O15209 634 aa11.98□□□□□ -0.49
NPM1P40-201ENST00000412758 ATF5Q9Y2D1 282 aaPredicted RBP11.92□□□□□ -0.5
NPM1P40-201ENST00000412758 RBM42Q9BTD8 480 aaKnown RBP11.91□□□□□ -0.5
NPM1P40-201ENST00000412758 ZBTB12Q9Y330 459 aaPredicted RBP11.72□□□□□ -0.53
NPM1P40-201ENST00000412758 ATXN8OSP0DMR3 200 aa11.7□□□□□ -0.54
NPM1P40-201ENST00000412758 CHRDL2Q6WN34 429 aa11.7□□□□□ -0.54
NPM1P40-201ENST00000412758 AKT1S1Q96B36 256 aa11.63□□□□□ -0.55
NPM1P40-201ENST00000412758 OSCARQ8IYS5 282 aa11.59□□□□□ -0.55
NPM1P40-201ENST00000412758 REM2Q8IYK8 340 aaPredicted RBP11.53□□□□□ -0.56
NPM1P40-201ENST00000412758 CSRNP3Q8WYN3 585 aa11.52□□□□□ -0.57
NPM1P40-201ENST00000412758 EHMT2Q96KQ7 1210 aa11.43□□□□□ -0.58
NPM1P40-201ENST00000412758 PIP4P2Q8N4L2 257 aa11.41□□□□□ -0.58
NPM1P40-201ENST00000412758 PITPNM1O00562 1244 aa11.4□□□□□ -0.58
NPM1P40-201ENST00000412758 FBLN2P98095 1184 aa11.4□□□□□ -0.58
NPM1P40-201ENST00000412758 MKRN4PQ13434 485 aaPredicted RBP11.36□□□□□ -0.59
NPM1P40-201ENST00000412758 SPDYE2BA6NHP3 402 aa11.34□□□□□ -0.59
NPM1P40-201ENST00000412758 SPDYE6P0CI01 402 aa11.34□□□□□ -0.59
NPM1P40-201ENST00000412758 SPDYE2Q495Y8 402 aa11.34□□□□□ -0.59
NPM1P40-201ENST00000412758 FXR2P51116 673 aaKnown RBP eCLIP11.31□□□□□ -0.6
NPM1P40-201ENST00000412758 ABCC9O60706 1549 aa11.3□□□□□ -0.6
NPM1P40-201ENST00000412758 SP7Q8TDD2 431 aaPredicted RBP11.3□□□□□ -0.6
NPM1P40-201ENST00000412758 HAX1O00165 279 aa11.25□□□□□ -0.61
NPM1P40-201ENST00000412758 CCDC180Q9P1Z9 1646 aa11.23□□□□□ -0.61
NPM1P40-201ENST00000412758 ZNF692Q9BU19 519 aaPredicted RBP11.22□□□□□ -0.61
NPM1P40-201ENST00000412758 CLEC11AQ9Y240 323 aa11.2□□□□□ -0.62
NPM1P40-201ENST00000412758 SPDYE1Q8NFV5 336 aaPredicted RBP11.17□□□□□ -0.62
NPM1P40-201ENST00000412758 SSUH2Q9Y2M2 353 aa11.17□□□□□ -0.62
NPM1P40-201ENST00000412758 PRKAR2AP13861 404 aaKnown RBP11.12□□□□□ -0.63
NPM1P40-201ENST00000412758 EVX2Q03828 476 aa11.09□□□□□ -0.63
NPM1P40-201ENST00000412758 PABPN1Q86U42 306 aaKnown RBP eCLIP11.04□□□□□ -0.64
NPM1P40-201ENST00000412758 PRR29P0C7W0 189 aa10.99□□□□□ -0.65
NPM1P40-201ENST00000412758 CHADLQ6NUI6 762 aa10.98□□□□□ -0.65
NPM1P40-201ENST00000412758 C19orf67A6NJJ6 358 aa10.95□□□□□ -0.66
NPM1P40-201ENST00000412758 SLC24A1O60721 1099 aa10.94□□□□□ -0.66
NPM1P40-201ENST00000412758 SPDYE4A6NLX3 237 aa10.87□□□□□ -0.67
NPM1P40-201ENST00000412758 GABBR2O75899 941 aa10.83□□□□□ -0.68
NPM1P40-201ENST00000412758 FARP1Q9Y4F1 1045 aaPredicted RBP10.8□□□□□ -0.68
NPM1P40-201ENST00000412758 RB1CC1Q8TDY2 1594 aa10.77□□□□□ -0.69
NPM1P40-201ENST00000412758 CD44P16070 742 aaKnown RBP10.76□□□□□ -0.69
NPM1P40-201ENST00000412758 STAG3Q9UJ98 1225 aa10.74□□□□□ -0.69
NPM1P40-201ENST00000412758 CREBZFQ9NS37 354 aa10.67□□□□□ -0.7
NPM1P40-201ENST00000412758 NACADO15069 1562 aa10.65□□□□□ -0.7
NPM1P40-201ENST00000412758 CLCN6P51797 869 aa10.61□□□□□ -0.71
NPM1P40-201ENST00000412758 LHX8Q68G74 356 aa10.61□□□□□ -0.71
NPM1P40-201ENST00000412758 PROM2Q8N271 834 aa10.6□□□□□ -0.71
NPM1P40-201ENST00000412758 ZRANB1Q9UGI0 708 aa10.6□□□□□ -0.71
NPM1P40-201ENST00000412758 POTEIP0CG38 1075 aa10.59□□□□□ -0.71
NPM1P40-201ENST00000412758 ZNF579Q8NAF0 562 aaKnown RBP10.56□□□□□ -0.72
NPM1P40-201ENST00000412758 UNC13AQ9UPW8 1703 aa10.53□□□□□ -0.72
NPM1P40-201ENST00000412758 DCBLD2Q96PD2 775 aa10.53□□□□□ -0.72
NPM1P40-201ENST00000412758 MYO15BQ96JP2 1530 aa10.49□□□□□ -0.73
NPM1P40-201ENST00000412758 PAK3O75914 559 aaPredicted RBP10.49□□□□□ -0.73
NPM1P40-201ENST00000412758 MNX1P50219 401 aaPredicted RBP10.49□□□□□ -0.73
NPM1P40-201ENST00000412758 NPM1P06748 294 aaKnown RBP eCLIP10.48□□□□□ -0.73
NPM1P40-201ENST00000412758 GALR2O43603 387 aaPredicted RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms