RNA–Protein interactions for RNA: ENST00000515212.1

HMGN1P9-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene, humanhuman

BASIC

Gene HMGN1P9, Length 298 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P9-201ENST00000515212 AEBP2Q6ZN18 517 aaPredicted RBP17.66■□□□□ 0.42
HMGN1P9-201ENST00000515212 CHIC1Q5VXU3 224 aa17.18■□□□□ 0.34
HMGN1P9-201ENST00000515212 SENP3Q9H4L4 574 aaPredicted RBP15.12■□□□□ 0.01
HMGN1P9-201ENST00000515212 PHF23Q9BUL5 403 aaPredicted RBP15.02■□□□□ -0
HMGN1P9-201ENST00000515212 FOXD1Q16676 465 aa13.99□□□□□ -0.17
HMGN1P9-201ENST00000515212 PLPPR3Q6T4P5 718 aa13.94□□□□□ -0.18
HMGN1P9-201ENST00000515212 ADRA2BP18089 450 aa13.33□□□□□ -0.28
HMGN1P9-201ENST00000515212 PPP6R1Q9UPN7 881 aa13.31□□□□□ -0.28
HMGN1P9-201ENST00000515212 PIAS4Q8N2W9 510 aaPredicted RBP13.22□□□□□ -0.29
HMGN1P9-201ENST00000515212 MSH5O43196 834 aa13.04□□□□□ -0.32
HMGN1P9-201ENST00000515212 SCAF1Q9H7N4 1312 aaKnown RBP12.33□□□□□ -0.44
HMGN1P9-201ENST00000515212 PPP4R3CPQ6ZMV5 832 aa12.24□□□□□ -0.45
HMGN1P9-201ENST00000515212 MAPK8IP2Q13387 824 aaPredicted RBP12.12□□□□□ -0.47
HMGN1P9-201ENST00000515212 POTEDQ86YR6 584 aa12.07□□□□□ -0.48
HMGN1P9-201ENST00000515212 DMRT2Q9Y5R5 561 aa12□□□□□ -0.49
HMGN1P9-201ENST00000515212 NCBP3Q53F19 620 aaKnown RBP11.95□□□□□ -0.5
HMGN1P9-201ENST00000515212 CNKSR2Q8WXI2 1034 aa11.95□□□□□ -0.5
HMGN1P9-201ENST00000515212 NISCHQ9Y2I1 1504 aa11.85□□□□□ -0.51
HMGN1P9-201ENST00000515212 KCNA4P22459 653 aa11.74□□□□□ -0.53
HMGN1P9-201ENST00000515212 RNF216Q9NWF9 866 aaPredicted RBP11.73□□□□□ -0.53
HMGN1P9-201ENST00000515212 HOXD11P31277 338 aaPredicted RBP11.7□□□□□ -0.54
HMGN1P9-201ENST00000515212 NPM3O75607 178 aaKnown RBP11.67□□□□□ -0.54
HMGN1P9-201ENST00000515212 DCAF8L1A6NGE4 600 aa11.61□□□□□ -0.55
HMGN1P9-201ENST00000515212 DNAJC5BQ9UF47 199 aa11.31□□□□□ -0.6
HMGN1P9-201ENST00000515212 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.23□□□□□ -0.61
HMGN1P9-201ENST00000515212 SLC4A1APQ9BWU0 796 aaKnown RBP11.22□□□□□ -0.61
HMGN1P9-201ENST00000515212 RNF39Q9H2S5 420 aa11.09□□□□□ -0.63
HMGN1P9-201ENST00000515212 SLC4A2P04920 1241 aa11.02□□□□□ -0.65
HMGN1P9-201ENST00000515212 C1QBPQ07021 282 aaKnown RBP11.01□□□□□ -0.65
HMGN1P9-201ENST00000515212 CACNB1Q02641 598 aaPredicted RBP11□□□□□ -0.65
HMGN1P9-201ENST00000515212 U3KPZ7 1027 aaPredicted RBP10.93□□□□□ -0.66
HMGN1P9-201ENST00000515212 FOXD4L1Q9NU39 408 aa10.91□□□□□ -0.66
HMGN1P9-201ENST00000515212 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.87□□□□□ -0.67
HMGN1P9-201ENST00000515212 HNRNPUL2Q1KMD3 747 aaKnown RBP10.87□□□□□ -0.67
HMGN1P9-201ENST00000515212 MYCNP04198 464 aaPredicted RBP10.84□□□□□ -0.67
HMGN1P9-201ENST00000515212 APLP2Q06481 763 aa10.83□□□□□ -0.68
HMGN1P9-201ENST00000515212 SAMD1Q6SPF0 538 aaPredicted RBP10.8□□□□□ -0.68
HMGN1P9-201ENST00000515212 ZBTB22O15209 634 aa10.74□□□□□ -0.69
HMGN1P9-201ENST00000515212 CAPN15O75808 1086 aa10.74□□□□□ -0.69
HMGN1P9-201ENST00000515212 EHMT2Q96KQ7 1210 aa10.72□□□□□ -0.69
HMGN1P9-201ENST00000515212 SPINK5Q9NQ38 1064 aaPredicted RBP10.68□□□□□ -0.7
HMGN1P9-201ENST00000515212 TRHP20396 242 aaPredicted RBP10.64□□□□□ -0.71
HMGN1P9-201ENST00000515212 ZNF219Q9P2Y4 722 aaPredicted RBP10.64□□□□□ -0.71
HMGN1P9-201ENST00000515212 CSRNP3Q8WYN3 585 aa10.61□□□□□ -0.71
HMGN1P9-201ENST00000515212 ATXN8OSP0DMR3 200 aa10.54□□□□□ -0.72
HMGN1P9-201ENST00000515212 DSG3P32926 999 aa10.52□□□□□ -0.73
HMGN1P9-201ENST00000515212 ABCB7O75027 752 aa10.47□□□□□ -0.73
HMGN1P9-201ENST00000515212 ATF5Q9Y2D1 282 aaPredicted RBP10.47□□□□□ -0.73
HMGN1P9-201ENST00000515212 POLA2Q14181 598 aa10.41□□□□□ -0.74
HMGN1P9-201ENST00000515212 CCDC180Q9P1Z9 1646 aa10.29□□□□□ -0.76
HMGN1P9-201ENST00000515212 ZBTB12Q9Y330 459 aaPredicted RBP10.28□□□□□ -0.76
HMGN1P9-201ENST00000515212 FBLN2P98095 1184 aa10.19□□□□□ -0.78
HMGN1P9-201ENST00000515212 RBM42Q9BTD8 480 aaKnown RBP10.12□□□□□ -0.79
HMGN1P9-201ENST00000515212 OSCARQ8IYS5 282 aa10.03□□□□□ -0.8
HMGN1P9-201ENST00000515212 MKRN4PQ13434 485 aaPredicted RBP10□□□□□ -0.81
HMGN1P9-201ENST00000515212 ZCCHC6Q5VYS8 1495 aaKnown RBP9.98□□□□□ -0.81
HMGN1P9-201ENST00000515212 SPDYE2BA6NHP3 402 aa9.95□□□□□ -0.82
HMGN1P9-201ENST00000515212 SPDYE6P0CI01 402 aa9.95□□□□□ -0.82
HMGN1P9-201ENST00000515212 SPDYE2Q495Y8 402 aa9.95□□□□□ -0.82
HMGN1P9-201ENST00000515212 AKT1S1Q96B36 256 aa9.92□□□□□ -0.82
HMGN1P9-201ENST00000515212 ZNF692Q9BU19 519 aaPredicted RBP9.91□□□□□ -0.82
HMGN1P9-201ENST00000515212 DCAF8L2P0C7V8 631 aa9.84□□□□□ -0.83
HMGN1P9-201ENST00000515212 SHROOM4Q9ULL8 1493 aa9.83□□□□□ -0.84
HMGN1P9-201ENST00000515212 SPDYE4A6NLX3 237 aa9.8□□□□□ -0.84
HMGN1P9-201ENST00000515212 REM2Q8IYK8 340 aaPredicted RBP9.79□□□□□ -0.84
HMGN1P9-201ENST00000515212 SSUH2Q9Y2M2 353 aa9.79□□□□□ -0.84
HMGN1P9-201ENST00000515212 DCAF1Q9Y4B6 1507 aa9.77□□□□□ -0.85
HMGN1P9-201ENST00000515212 PABPN1Q86U42 306 aaKnown RBP eCLIP9.75□□□□□ -0.85
HMGN1P9-201ENST00000515212 SPDYE1Q8NFV5 336 aaPredicted RBP9.71□□□□□ -0.86
HMGN1P9-201ENST00000515212 CLEC11AQ9Y240 323 aa9.71□□□□□ -0.86
HMGN1P9-201ENST00000515212 CHRDL2Q6WN34 429 aa9.7□□□□□ -0.86
HMGN1P9-201ENST00000515212 FKBP8Q14318 412 aa9.67□□□□□ -0.86
HMGN1P9-201ENST00000515212 ABCC9O60706 1549 aa9.66□□□□□ -0.86
HMGN1P9-201ENST00000515212 PITPNM1O00562 1244 aa9.66□□□□□ -0.86
HMGN1P9-201ENST00000515212 STAG3Q9UJ98 1225 aa9.62□□□□□ -0.87
HMGN1P9-201ENST00000515212 MYO15BQ96JP2 1530 aa9.6□□□□□ -0.87
HMGN1P9-201ENST00000515212 PRR29P0C7W0 189 aa9.59□□□□□ -0.87
HMGN1P9-201ENST00000515212 POTEHQ6S545 545 aa9.56□□□□□ -0.88
HMGN1P9-201ENST00000515212 NACADO15069 1562 aa9.55□□□□□ -0.88
HMGN1P9-201ENST00000515212 PROM2Q8N271 834 aa9.52□□□□□ -0.89
HMGN1P9-201ENST00000515212 SCRIBQ14160 1630 aa9.52□□□□□ -0.89
HMGN1P9-201ENST00000515212 SUPT5HO00267 1087 aaKnown RBP9.51□□□□□ -0.89
HMGN1P9-201ENST00000515212 FXR2P51116 673 aaKnown RBP eCLIP9.51□□□□□ -0.89
HMGN1P9-201ENST00000515212 PIP4P2Q8N4L2 257 aa9.51□□□□□ -0.89
HMGN1P9-201ENST00000515212 PRKAR2AP13861 404 aaKnown RBP9.47□□□□□ -0.89
HMGN1P9-201ENST00000515212 RB1CC1Q8TDY2 1594 aa9.46□□□□□ -0.9
HMGN1P9-201ENST00000515212 FBXO3Q9UK99 471 aa9.43□□□□□ -0.9
HMGN1P9-201ENST00000515212 CHADLQ6NUI6 762 aa9.42□□□□□ -0.9
HMGN1P9-201ENST00000515212 PLEKHG5O94827 1062 aa9.41□□□□□ -0.9
HMGN1P9-201ENST00000515212 MIER1Q8N108 512 aa9.36□□□□□ -0.91
HMGN1P9-201ENST00000515212 PLCD3Q8N3E9 789 aa9.34□□□□□ -0.91
HMGN1P9-201ENST00000515212 CREBZFQ9NS37 354 aa9.34□□□□□ -0.91
HMGN1P9-201ENST00000515212 HAX1O00165 279 aa9.33□□□□□ -0.92
HMGN1P9-201ENST00000515212 FARP1Q9Y4F1 1045 aaPredicted RBP9.31□□□□□ -0.92
HMGN1P9-201ENST00000515212 NPM1P06748 294 aaKnown RBP eCLIP9.3□□□□□ -0.92
HMGN1P9-201ENST00000515212 UNC13AQ9UPW8 1703 aa9.28□□□□□ -0.92
HMGN1P9-201ENST00000515212 ZBTB47Q9UFB7 747 aaPredicted RBP9.27□□□□□ -0.93
HMGN1P9-201ENST00000515212 RSF1Q96T23 1441 aaPredicted RBP9.24□□□□□ -0.93
HMGN1P9-201ENST00000515212 VASPP50552 380 aaPredicted RBP9.22□□□□□ -0.93
HMGN1P9-201ENST00000515212 CECR2Q9BXF3 1484 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms