RNA–Protein interactions for RNA: ENST00000635991.1

CRNDE-213, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 5 BASIC

Gene CRNDE, Length 546 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-213ENST00000635991 AEBP2Q6ZN18 517 aaPredicted RBP21.87■■□□□ 1.09
CRNDE-213ENST00000635991 CHIC1Q5VXU3 224 aa21.83■■□□□ 1.09
CRNDE-213ENST00000635991 PHF23Q9BUL5 403 aaPredicted RBP19.18■□□□□ 0.66
CRNDE-213ENST00000635991 SENP3Q9H4L4 574 aaPredicted RBP18.6■□□□□ 0.57
CRNDE-213ENST00000635991 PLPPR3Q6T4P5 718 aa17.94■□□□□ 0.46
CRNDE-213ENST00000635991 FOXD1Q16676 465 aa17.13■□□□□ 0.33
CRNDE-213ENST00000635991 ADRA2BP18089 450 aa16.76■□□□□ 0.27
CRNDE-213ENST00000635991 PPP6R1Q9UPN7 881 aa16.76■□□□□ 0.27
CRNDE-213ENST00000635991 PIAS4Q8N2W9 510 aaPredicted RBP16.28■□□□□ 0.2
CRNDE-213ENST00000635991 KCNA4P22459 653 aa15.87■□□□□ 0.13
CRNDE-213ENST00000635991 PPP4R3CPQ6ZMV5 832 aa15.8■□□□□ 0.12
CRNDE-213ENST00000635991 MSH5O43196 834 aa15.74■□□□□ 0.11
CRNDE-213ENST00000635991 NCBP3Q53F19 620 aaKnown RBP15.57■□□□□ 0.08
CRNDE-213ENST00000635991 SCAF1Q9H7N4 1312 aaKnown RBP15.47■□□□□ 0.07
CRNDE-213ENST00000635991 CNKSR2Q8WXI2 1034 aa15.32■□□□□ 0.04
CRNDE-213ENST00000635991 NPM3O75607 178 aaKnown RBP15.28■□□□□ 0.04
CRNDE-213ENST00000635991 SLC4A1APQ9BWU0 796 aaKnown RBP15.22■□□□□ 0.03
CRNDE-213ENST00000635991 EHMT2Q96KQ7 1210 aa15.18■□□□□ 0.02
CRNDE-213ENST00000635991 MAPK8IP2Q13387 824 aaPredicted RBP15.06■□□□□ 0
CRNDE-213ENST00000635991 RNF216Q9NWF9 866 aaPredicted RBP14.92□□□□□ -0.02
CRNDE-213ENST00000635991 DNAJC5BQ9UF47 199 aa14.92□□□□□ -0.02
CRNDE-213ENST00000635991 DMRT2Q9Y5R5 561 aa14.89□□□□□ -0.03
CRNDE-213ENST00000635991 CSRNP3Q8WYN3 585 aa14.86□□□□□ -0.03
CRNDE-213ENST00000635991 HOXD11P31277 338 aaPredicted RBP14.75□□□□□ -0.05
CRNDE-213ENST00000635991 ZBTB22O15209 634 aa14.59□□□□□ -0.07
CRNDE-213ENST00000635991 FOXD4L1Q9NU39 408 aa14.56□□□□□ -0.08
CRNDE-213ENST00000635991 SLC4A2P04920 1241 aa14.31□□□□□ -0.12
CRNDE-213ENST00000635991 MYCNP04198 464 aaPredicted RBP14.16□□□□□ -0.14
CRNDE-213ENST00000635991 DCAF8L1A6NGE4 600 aa14.14□□□□□ -0.15
CRNDE-213ENST00000635991 ATXN8OSP0DMR3 200 aa14.08□□□□□ -0.16
CRNDE-213ENST00000635991 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.02□□□□□ -0.17
CRNDE-213ENST00000635991 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.91□□□□□ -0.18
CRNDE-213ENST00000635991 HNRNPUL2Q1KMD3 747 aaKnown RBP13.91□□□□□ -0.18
CRNDE-213ENST00000635991 SAMD1Q6SPF0 538 aaPredicted RBP13.86□□□□□ -0.19
CRNDE-213ENST00000635991 U3KPZ7 1027 aaPredicted RBP13.83□□□□□ -0.2
CRNDE-213ENST00000635991 APLP2Q06481 763 aa13.69□□□□□ -0.22
CRNDE-213ENST00000635991 ATF5Q9Y2D1 282 aaPredicted RBP13.64□□□□□ -0.23
CRNDE-213ENST00000635991 POTEDQ86YR6 584 aa13.53□□□□□ -0.24
CRNDE-213ENST00000635991 RNF39Q9H2S5 420 aa13.48□□□□□ -0.25
CRNDE-213ENST00000635991 ZNF219Q9P2Y4 722 aaPredicted RBP13.45□□□□□ -0.26
CRNDE-213ENST00000635991 FKBP8Q14318 412 aa13.41□□□□□ -0.26
CRNDE-213ENST00000635991 C1QBPQ07021 282 aaKnown RBP13.38□□□□□ -0.27
CRNDE-213ENST00000635991 SPINK5Q9NQ38 1064 aaPredicted RBP13.28□□□□□ -0.28
CRNDE-213ENST00000635991 TRHP20396 242 aaPredicted RBP13.25□□□□□ -0.29
CRNDE-213ENST00000635991 CAPN15O75808 1086 aa13.24□□□□□ -0.29
CRNDE-213ENST00000635991 FBLN2P98095 1184 aa13.15□□□□□ -0.3
CRNDE-213ENST00000635991 POLA2Q14181 598 aa13.14□□□□□ -0.31
CRNDE-213ENST00000635991 MKRN4PQ13434 485 aaPredicted RBP13.1□□□□□ -0.31
CRNDE-213ENST00000635991 ZBTB12Q9Y330 459 aaPredicted RBP13.09□□□□□ -0.31
CRNDE-213ENST00000635991 SPDYE4A6NLX3 237 aa13.04□□□□□ -0.32
CRNDE-213ENST00000635991 AMER1Q5JTC6 1135 aaPredicted RBP13.02□□□□□ -0.33
CRNDE-213ENST00000635991 ABCB7O75027 752 aa12.98□□□□□ -0.33
CRNDE-213ENST00000635991 DSG3P32926 999 aa12.95□□□□□ -0.34
CRNDE-213ENST00000635991 PROM2Q8N271 834 aa12.94□□□□□ -0.34
CRNDE-213ENST00000635991 FBXO3Q9UK99 471 aa12.92□□□□□ -0.34
CRNDE-213ENST00000635991 RTN4Q9NQC3 1192 aaKnown RBP12.89□□□□□ -0.35
CRNDE-213ENST00000635991 CACNB1Q02641 598 aaPredicted RBP12.8□□□□□ -0.36
CRNDE-213ENST00000635991 SPDYE2BA6NHP3 402 aa12.73□□□□□ -0.37
CRNDE-213ENST00000635991 SPDYE6P0CI01 402 aa12.73□□□□□ -0.37
CRNDE-213ENST00000635991 SPDYE2Q495Y8 402 aa12.73□□□□□ -0.37
CRNDE-213ENST00000635991 OSCARQ8IYS5 282 aa12.7□□□□□ -0.38
CRNDE-213ENST00000635991 ZNF692Q9BU19 519 aaPredicted RBP12.69□□□□□ -0.38
CRNDE-213ENST00000635991 VASPP50552 380 aaPredicted RBP12.68□□□□□ -0.38
CRNDE-213ENST00000635991 SSUH2Q9Y2M2 353 aa12.67□□□□□ -0.38
CRNDE-213ENST00000635991 STAG3Q9UJ98 1225 aa12.55□□□□□ -0.4
CRNDE-213ENST00000635991 PABPN1Q86U42 306 aaKnown RBP eCLIP12.52□□□□□ -0.41
CRNDE-213ENST00000635991 IFNLR1Q8IU57 520 aaPredicted RBP12.5□□□□□ -0.41
CRNDE-213ENST00000635991 RBM42Q9BTD8 480 aaKnown RBP12.41□□□□□ -0.42
CRNDE-213ENST00000635991 SLC24A1O60721 1099 aa12.36□□□□□ -0.43
CRNDE-213ENST00000635991 PLCD3Q8N3E9 789 aa12.35□□□□□ -0.43
CRNDE-213ENST00000635991 KLHL34Q8N239 644 aa12.33□□□□□ -0.44
CRNDE-213ENST00000635991 SPOCK2Q92563 424 aa12.33□□□□□ -0.44
CRNDE-213ENST00000635991 AKT1S1Q96B36 256 aa12.32□□□□□ -0.44
CRNDE-213ENST00000635991 PLEKHG5O94827 1062 aa12.3□□□□□ -0.44
CRNDE-213ENST00000635991 MIER1Q8N108 512 aa12.29□□□□□ -0.44
CRNDE-213ENST00000635991 ZBTB47Q9UFB7 747 aaPredicted RBP12.28□□□□□ -0.44
CRNDE-213ENST00000635991 SPDYE1Q8NFV5 336 aaPredicted RBP12.25□□□□□ -0.45
CRNDE-213ENST00000635991 PKD2Q13563 968 aa12.24□□□□□ -0.45
CRNDE-213ENST00000635991 REM2Q8IYK8 340 aaPredicted RBP12.14□□□□□ -0.47
CRNDE-213ENST00000635991 ECM2O94769 699 aaPredicted RBP12.1□□□□□ -0.47
CRNDE-213ENST00000635991 CLEC11AQ9Y240 323 aa12.09□□□□□ -0.47
CRNDE-213ENST00000635991 DCAF8L2P0C7V8 631 aa12.08□□□□□ -0.48
CRNDE-213ENST00000635991 PRR29P0C7W0 189 aa12.08□□□□□ -0.48
CRNDE-213ENST00000635991 TRIM41Q8WV44 630 aa12.06□□□□□ -0.48
CRNDE-213ENST00000635991 CREBZFQ9NS37 354 aa12.01□□□□□ -0.49
CRNDE-213ENST00000635991 CIZ1Q9ULV3 898 aaPredicted RBP12.01□□□□□ -0.49
CRNDE-213ENST00000635991 PLCB2Q00722 1185 aa12□□□□□ -0.49
CRNDE-213ENST00000635991 PITPNM1O00562 1244 aa11.99□□□□□ -0.49
CRNDE-213ENST00000635991 GSE1Q14687 1217 aa11.99□□□□□ -0.49
CRNDE-213ENST00000635991 NUBP1P53384 320 aa11.96□□□□□ -0.49
CRNDE-213ENST00000635991 RGL2O15211 777 aa11.94□□□□□ -0.5
CRNDE-213ENST00000635991 MNX1P50219 401 aaPredicted RBP11.94□□□□□ -0.5
CRNDE-213ENST00000635991 FAM212AQ96EL1 285 aa11.9□□□□□ -0.5
CRNDE-213ENST00000635991 BBXQ8WY36 941 aaPredicted RBP11.89□□□□□ -0.51
CRNDE-213ENST00000635991 NPM1P06748 294 aaKnown RBP eCLIP11.88□□□□□ -0.51
CRNDE-213ENST00000635991 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.87□□□□□ -0.51
CRNDE-213ENST00000635991 DCAF8Q5TAQ9 597 aa11.86□□□□□ -0.51
CRNDE-213ENST00000635991 TAOK2Q9UL54 1235 aa11.82□□□□□ -0.52
CRNDE-213ENST00000635991 CHRM1P11229 460 aaPredicted RBP11.79□□□□□ -0.52
CRNDE-213ENST00000635991 RASEFQ8IZ41 740 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms